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CBS51388_006840-T1, CBS51388_006840-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_006840-T1
Unique NameCBS51388_006840-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An11:1014916..1016535-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_006840-T1 ID=CBS51388_006840-T1|Name=CBS51388_006840-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1620bp|location=Sequence derived from alignment at An11:1014916..1016535- (Aspergillus niger CBS 513.88)
ATGCGCCATCGACTCACAAAGCGTGCATGCGATGAGTGTATCTCCCGCAA GGTCAAGTGCAGCGGCGCCTGGCCCTGTGATACCTGCCAGAGTGCCCAAA AGCAAGTCAACTGCACTTACCTGAAACCTGCGCGGAGAAGGGGACCTAAG GTACGAAGGTATATCGGGGGTCAGGGATCGGAACACGCGACAACCGGTCC TTTGATCACTCCACATGTTGATCCGCGTGACGAGGGGATAGCCCGTGTGG AGGTAGAGCAACATGTCTTGAGTACTATCCCAACAGAAGAACTGGTCTCG GTAGTGCGCTTCTACCAGCAGGCGTCTTATAGTGTGTGGCCGGTTGTCAA TGCAGAAGTGCTGTTGAACAAGCTTGAGCATGGCACGCCAGATATTGGAA CCTTGTGTCTGGCCATGGCTCTCTGTGCAGCCACCATGGCACAGCTGCAG CTTGCTCCGACAACTGTTGATAGCACGATGATGGCGGCGGAGTGTATGAG GATGCGTGAAGCGCACCTTGATTTGAGGAGCGTCTTGGTCTCGTTCTTCC TGCATGTATATCATGCCAAGATCAACCAGAGGGACTCGGCCATGCGGTTC ATACGAGAGGCTGTGTATGGCGCTAGGCTGTTGAAGCTGGATGAAGGTGT GGGTGAGCAAGAGACTGCGCTCGGTGCAGATGTTGTTGCTAATAAAGAGA TTGTATTCCTCTTGCTCTGGGTTTCTGAAAGGTAGAAATTCCTCTTCGCA AGTCCACTGTAGTTCATACTGACATTGCTCAGGGGCTATGCTATGCATCT CGGTCTCGAACCATCATATACCAGTCCTATTCGCCTACCCGATGAGGTCG ATGTGGGAGATAGCGCGGATGCGAAAGGCCTGCTTGAGCTTGGCAGACTC TTTGCCACGTTCGATGGGTTTTCGTCCGGAAGGAGCACAAATTCCAGAGA TAAGCTAGTAATGACTGCGGATAGTCTTGCGAAGACGGAGACAGTTCTAT CGATGCTTTCGTTCGGTAAAGGCGACCGACCTTCCACCCGCATTGCGGAT TATTGCATCACGAAAGAATGGATGAGGACTATCATCTGGCAGGAAGCTCT GTCTCGGCGTCTGCTCTCCTCGAAATCCGGTGCCCAGCTCATGACATTTA GATTCCCGGCGGTGGTTAGCCGTGACCTTTTGATGTCTCTACAAGGCTTT AATGAGTCTGACTTGCTGCCTTTGGGGCGCGACCAGGTTTGTTTTCGCGA TTCTTGGGGCTGCCAGGTACTAATCGAATTCCGAGTTTAGCTGTTGAAGT GTTTCGAGATCGCCAACTCACTCGCGGATACTGTCCTGCTCACGCCATCG GTATCCACATACTCTGCCTTCCAGTTAGGGCCACACGACTTTCTGCACGC CTTATACCAGAAGCTGCTGCCTTTCCTGGAGCAAGATCTCATGTTGAAGT CGATACTGCATAGTAAGACGGCTGAGGCCTTGCTTAAAGCCCCCGCGCGC TTACTGGACTTGAACTATGACCCTTGGTCATTCGATGACGATAAAGATAA CGCTTACACTACCGAAGAGCATGTGGACTCTCCTGAGCAGTACGTTGATT CGCGATGGGCTCTCTATTAA
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Coding sequence (CDS) from alignment at An11:1014916..1016535-

>CBS51388_006840-T1 ID=CBS51388_006840-T1|Name=CBS51388_006840-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4545bp|location=Sequence derived from alignment at An11:1014916..1016535- (Aspergillus niger CBS 513.88)
CTGTTGAAGTGTTTCGAGATCGCCAACTCACTCGCGGATACTGTCCTGCT
CACGCCATCGGTATCCACATACTCTGCCTTCCAGTTAGGGCCACACGACT
TTCTGCACGCCTTATACCAGAAGCTGCTGCCTTTCCTGGAGCAAGATCTC
ATGTTGAAGTCGATACTGCATAGTAAGACGGCTGAGGCCTTGCTTAAAGC
CCCCGCGCGCTTACTGGACTTGAACTATGACCCTTGGTCATTCGATGACG
ATAAAGATAACGCTTACACTACCGAAGAGCATGTGGACTCTCCTGAGCAG
TACGTTGATTCGCGATGGGCTCTCTATTAAGGGCTATGCTATGCATCTCG
GTCTCGAACCATCATATACCAGTCCTATTCGCCTACCCGATGAGGTCGAT
GTGGGAGATAGCGCGGATGCGAAAGGCCTGCTTGAGCTTGGCAGACTCTT
TGCCACGTTCGATGGGTTTTCGTCCGGAAGGAGCACAAATTCCAGAGATA
AGCTAGTAATGACTGCGGATAGTCTTGCGAAGACGGAGACAGTTCTATCG
ATGCTTTCGTTCGGTAAAGGCGACCGACCTTCCACCCGCATTGCGGATTA
TTGCATCACGAAAGAATGGATGAGGACTATCATCTGGCAGGAAGCTCTGT
CTCGGCGTCTGCTCTCCTCGAAATCCGGTGCCCAGCTCATGACATTTAGA
TTCCCGGCGGTGGTTAGCCGTGACCTTTTGATGTCTCTACAAGGCTTTAA
TGAGTCTGACTTGCTGCCTTTGGGGCGCGACCAGATGCGCCATCGACTCA
CAAAGCGTGCATGCGATGAGTGTATCTCCCGCAAGGTCAAGTGCAGCGGC
GCCTGGCCCTGTGATACCTGCCAGAGTGCCCAAAAGCAAGTCAACTGCAC
TTACCTGAAACCTGCGCGGAGAAGGGGACCTAAGGTACGAAGGTATATCG
GGGGTCAGGGATCGGAACACGCGACAACCGGTCCTTTGATCACTCCACAT
GTTGATCCGCGTGACGAGGGGATAGCCCGTGTGGAGGTAGAGCAACATGT
CTTGAGTACTATCCCAACAGAAGAACTGGTCTCGGTAGTGCGCTTCTACC
AGCAGGCGTCTTATAGTGTGTGGCCGGTTGTCAATGCAGAAGTGCTGTTG
AACAAGCTTGAGCATGGCACGCCAGATATTGGAACCTTGTGTCTGGCCAT
GGCTCTCTGTGCAGCCACCATGGCACAGCTGCAGCTTGCTCCGACAACTG
TTGATAGCACGATGATGGCGGCGGAGTGTATGAGGATGCGTGAAGCGCAC
CTTGATTTGAGGAGCGTCTTGGTCTCGTTCTTCCTGCATGTATATCATGC
CAAGATCAACCAGAGGGACTCGGCCATGCGGTTCATACGAGAGGCTGTGT
ATGGCGCTAGGCTGTTGAAGCTGGATGAAGGTGTGGGTGAGCAAGAGACT
GCGCTCGGTGCAGATGTTGTTGCTAATAAAGAGATTGTATTCCTCTTGCT
CTGGGTTTCTGAAAGCTGTTGAAGTGTTTCGAGATCGCCAACTCACTCGC
GGATACTGTCCTGCTCACGCCATCGGTATCCACATACTCTGCCTTCCAGT
TAGGGCCACACGACTTTCTGCACGCCTTATACCAGAAGCTGCTGCCTTTC
CTGGAGCAAGATCTCATGTTGAAGTCGATACTGCATAGTAAGACGGCTGA
GGCCTTGCTTAAAGCCCCCGCGCGCTTACTGGACTTGAACTATGACCCTT
GGTCATTCGATGACGATAAAGATAACGCTTACACTACCGAAGAGCATGTG
GACTCTCCTGAGCAGTACGTTGATTCGCGATGGGCTCTCTATTAAGGGCT
ATGCTATGCATCTCGGTCTCGAACCATCATATACCAGTCCTATTCGCCTA
CCCGATGAGGTCGATGTGGGAGATAGCGCGGATGCGAAAGGCCTGCTTGA
GCTTGGCAGACTCTTTGCCACGTTCGATGGGTTTTCGTCCGGAAGGAGCA
CAAATTCCAGAGATAAGCTAGTAATGACTGCGGATAGTCTTGCGAAGACG
GAGACAGTTCTATCGATGCTTTCGTTCGGTAAAGGCGACCGACCTTCCAC
CCGCATTGCGGATTATTGCATCACGAAAGAATGGATGAGGACTATCATCT
GGCAGGAAGCTCTGTCTCGGCGTCTGCTCTCCTCGAAATCCGGTGCCCAG
CTCATGACATTTAGATTCCCGGCGGTGGTTAGCCGTGACCTTTTGATGTC
TCTACAAGGCTTTAATGAGTCTGACTTGCTGCCTTTGGGGCGCGACCAGA
TGCGCCATCGACTCACAAAGCGTGCATGCGATGAGTGTATCTCCCGCAAG
GTCAAGTGCAGCGGCGCCTGGCCCTGTGATACCTGCCAGAGTGCCCAAAA
GCAAGTCAACTGCACTTACCTGAAACCTGCGCGGAGAAGGGGACCTAAGG
TACGAAGGTATATCGGGGGTCAGGGATCGGAACACGCGACAACCGGTCCT
TTGATCACTCCACATGTTGATCCGCGTGACGAGGGGATAGCCCGTGTGGA
GGTAGAGCAACATGTCTTGAGTACTATCCCAACAGAAGAACTGGTCTCGG
TAGTGCGCTTCTACCAGCAGGCGTCTTATAGTGTGTGGCCGGTTGTCAAT
GCAGAAGTGCTGTTGAACAAGCTTGAGCATGGCACGCCAGATATTGGAAC
CTTGTGTCTGGCCATGGCTCTCTGTGCAGCCACCATGGCACAGCTGCAGC
TTGCTCCGACAACTGTTGATAGCACGATGATGGCGGCGGAGTGTATGAGG
ATGCGTGAAGCGCACCTTGATTTGAGGAGCGTCTTGGTCTCGTTCTTCCT
GCATGTATATCATGCCAAGATCAACCAGAGGGACTCGGCCATGCGGTTCA
TACGAGAGGCTGTGTATGGCGCTAGGCTGTTGAAGCTGGATGAAGGTGTG
GGTGAGCAAGAGACTGCGCTCGGTGCAGATGTTGTTGCTAATAAAGAGAT
TGTATTCCTCTTGCTCTGGGTTTCTGAAAGCTGTTGAAGTGTTTCGAGAT
CGCCAACTCACTCGCGGATACTGTCCTGCTCACGCCATCGGTATCCACAT
ACTCTGCCTTCCAGTTAGGGCCACACGACTTTCTGCACGCCTTATACCAG
AAGCTGCTGCCTTTCCTGGAGCAAGATCTCATGTTGAAGTCGATACTGCA
TAGTAAGACGGCTGAGGCCTTGCTTAAAGCCCCCGCGCGCTTACTGGACT
TGAACTATGACCCTTGGTCATTCGATGACGATAAAGATAACGCTTACACT
ACCGAAGAGCATGTGGACTCTCCTGAGCAGTACGTTGATTCGCGATGGGC
TCTCTATTAAGGGCTATGCTATGCATCTCGGTCTCGAACCATCATATACC
AGTCCTATTCGCCTACCCGATGAGGTCGATGTGGGAGATAGCGCGGATGC
GAAAGGCCTGCTTGAGCTTGGCAGACTCTTTGCCACGTTCGATGGGTTTT
CGTCCGGAAGGAGCACAAATTCCAGAGATAAGCTAGTAATGACTGCGGAT
AGTCTTGCGAAGACGGAGACAGTTCTATCGATGCTTTCGTTCGGTAAAGG
CGACCGACCTTCCACCCGCATTGCGGATTATTGCATCACGAAAGAATGGA
TGAGGACTATCATCTGGCAGGAAGCTCTGTCTCGGCGTCTGCTCTCCTCG
AAATCCGGTGCCCAGCTCATGACATTTAGATTCCCGGCGGTGGTTAGCCG
TGACCTTTTGATGTCTCTACAAGGCTTTAATGAGTCTGACTTGCTGCCTT
TGGGGCGCGACCAGATGCGCCATCGACTCACAAAGCGTGCATGCGATGAG
TGTATCTCCCGCAAGGTCAAGTGCAGCGGCGCCTGGCCCTGTGATACCTG
CCAGAGTGCCCAAAAGCAAGTCAACTGCACTTACCTGAAACCTGCGCGGA
GAAGGGGACCTAAGGTACGAAGGTATATCGGGGGTCAGGGATCGGAACAC
GCGACAACCGGTCCTTTGATCACTCCACATGTTGATCCGCGTGACGAGGG
GATAGCCCGTGTGGAGGTAGAGCAACATGTCTTGAGTACTATCCCAACAG
AAGAACTGGTCTCGGTAGTGCGCTTCTACCAGCAGGCGTCTTATAGTGTG
TGGCCGGTTGTCAATGCAGAAGTGCTGTTGAACAAGCTTGAGCATGGCAC
GCCAGATATTGGAACCTTGTGTCTGGCCATGGCTCTCTGTGCAGCCACCA
TGGCACAGCTGCAGCTTGCTCCGACAACTGTTGATAGCACGATGATGGCG
GCGGAGTGTATGAGGATGCGTGAAGCGCACCTTGATTTGAGGAGCGTCTT
GGTCTCGTTCTTCCTGCATGTATATCATGCCAAGATCAACCAGAGGGACT
CGGCCATGCGGTTCATACGAGAGGCTGTGTATGGCGCTAGGCTGTTGAAG
CTGGATGAAGGTGTGGGTGAGCAAGAGACTGCGCTCGGTGCAGATGTTGT
TGCTAATAAAGAGATTGTATTCCTCTTGCTCTGGGTTTCTGAAAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0042025host cell nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_006840CBS51388_006840Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006840-T1CBS51388_006840-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006840-T1.cdsCBS51388_006840-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006840-T1.exon3CBS51388_006840-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_006840-T1.exon2CBS51388_006840-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_006840-T1.exon1CBS51388_006840-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An11supercontigAn11:1014916..1016535 -