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Sequences
The following sequences are available for this feature:
mRNA from alignment at An11:1014916..1016535- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_006840-T1 ID=CBS51388_006840-T1|Name=CBS51388_006840-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1620bp|location=Sequence derived from alignment at An11:1014916..1016535- (Aspergillus niger CBS 513.88) ATGCGCCATCGACTCACAAAGCGTGCATGCGATGAGTGTATCTCCCGCAA
GGTCAAGTGCAGCGGCGCCTGGCCCTGTGATACCTGCCAGAGTGCCCAAA
AGCAAGTCAACTGCACTTACCTGAAACCTGCGCGGAGAAGGGGACCTAAG
GTACGAAGGTATATCGGGGGTCAGGGATCGGAACACGCGACAACCGGTCC
TTTGATCACTCCACATGTTGATCCGCGTGACGAGGGGATAGCCCGTGTGG
AGGTAGAGCAACATGTCTTGAGTACTATCCCAACAGAAGAACTGGTCTCG
GTAGTGCGCTTCTACCAGCAGGCGTCTTATAGTGTGTGGCCGGTTGTCAA
TGCAGAAGTGCTGTTGAACAAGCTTGAGCATGGCACGCCAGATATTGGAA
CCTTGTGTCTGGCCATGGCTCTCTGTGCAGCCACCATGGCACAGCTGCAG
CTTGCTCCGACAACTGTTGATAGCACGATGATGGCGGCGGAGTGTATGAG
GATGCGTGAAGCGCACCTTGATTTGAGGAGCGTCTTGGTCTCGTTCTTCC
TGCATGTATATCATGCCAAGATCAACCAGAGGGACTCGGCCATGCGGTTC
ATACGAGAGGCTGTGTATGGCGCTAGGCTGTTGAAGCTGGATGAAGGTGT
GGGTGAGCAAGAGACTGCGCTCGGTGCAGATGTTGTTGCTAATAAAGAGA
TTGTATTCCTCTTGCTCTGGGTTTCTGAAAGGTAGAAATTCCTCTTCGCA
AGTCCACTGTAGTTCATACTGACATTGCTCAGGGGCTATGCTATGCATCT
CGGTCTCGAACCATCATATACCAGTCCTATTCGCCTACCCGATGAGGTCG
ATGTGGGAGATAGCGCGGATGCGAAAGGCCTGCTTGAGCTTGGCAGACTC
TTTGCCACGTTCGATGGGTTTTCGTCCGGAAGGAGCACAAATTCCAGAGA
TAAGCTAGTAATGACTGCGGATAGTCTTGCGAAGACGGAGACAGTTCTAT
CGATGCTTTCGTTCGGTAAAGGCGACCGACCTTCCACCCGCATTGCGGAT
TATTGCATCACGAAAGAATGGATGAGGACTATCATCTGGCAGGAAGCTCT
GTCTCGGCGTCTGCTCTCCTCGAAATCCGGTGCCCAGCTCATGACATTTA
GATTCCCGGCGGTGGTTAGCCGTGACCTTTTGATGTCTCTACAAGGCTTT
AATGAGTCTGACTTGCTGCCTTTGGGGCGCGACCAGGTTTGTTTTCGCGA
TTCTTGGGGCTGCCAGGTACTAATCGAATTCCGAGTTTAGCTGTTGAAGT
GTTTCGAGATCGCCAACTCACTCGCGGATACTGTCCTGCTCACGCCATCG
GTATCCACATACTCTGCCTTCCAGTTAGGGCCACACGACTTTCTGCACGC
CTTATACCAGAAGCTGCTGCCTTTCCTGGAGCAAGATCTCATGTTGAAGT
CGATACTGCATAGTAAGACGGCTGAGGCCTTGCTTAAAGCCCCCGCGCGC
TTACTGGACTTGAACTATGACCCTTGGTCATTCGATGACGATAAAGATAA
CGCTTACACTACCGAAGAGCATGTGGACTCTCCTGAGCAGTACGTTGATT
CGCGATGGGCTCTCTATTAA back to topCoding sequence (CDS) from alignment at An11:1014916..1016535- >CBS51388_006840-T1 ID=CBS51388_006840-T1|Name=CBS51388_006840-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4545bp|location=Sequence derived from alignment at An11:1014916..1016535- (Aspergillus niger CBS 513.88) CTGTTGAAGTGTTTCGAGATCGCCAACTCACTCGCGGATACTGTCCTGCT CACGCCATCGGTATCCACATACTCTGCCTTCCAGTTAGGGCCACACGACT TTCTGCACGCCTTATACCAGAAGCTGCTGCCTTTCCTGGAGCAAGATCTC ATGTTGAAGTCGATACTGCATAGTAAGACGGCTGAGGCCTTGCTTAAAGC CCCCGCGCGCTTACTGGACTTGAACTATGACCCTTGGTCATTCGATGACG ATAAAGATAACGCTTACACTACCGAAGAGCATGTGGACTCTCCTGAGCAG TACGTTGATTCGCGATGGGCTCTCTATTAAGGGCTATGCTATGCATCTCG GTCTCGAACCATCATATACCAGTCCTATTCGCCTACCCGATGAGGTCGAT GTGGGAGATAGCGCGGATGCGAAAGGCCTGCTTGAGCTTGGCAGACTCTT TGCCACGTTCGATGGGTTTTCGTCCGGAAGGAGCACAAATTCCAGAGATA AGCTAGTAATGACTGCGGATAGTCTTGCGAAGACGGAGACAGTTCTATCG ATGCTTTCGTTCGGTAAAGGCGACCGACCTTCCACCCGCATTGCGGATTA TTGCATCACGAAAGAATGGATGAGGACTATCATCTGGCAGGAAGCTCTGT CTCGGCGTCTGCTCTCCTCGAAATCCGGTGCCCAGCTCATGACATTTAGA TTCCCGGCGGTGGTTAGCCGTGACCTTTTGATGTCTCTACAAGGCTTTAA TGAGTCTGACTTGCTGCCTTTGGGGCGCGACCAGATGCGCCATCGACTCA CAAAGCGTGCATGCGATGAGTGTATCTCCCGCAAGGTCAAGTGCAGCGGC GCCTGGCCCTGTGATACCTGCCAGAGTGCCCAAAAGCAAGTCAACTGCAC TTACCTGAAACCTGCGCGGAGAAGGGGACCTAAGGTACGAAGGTATATCG GGGGTCAGGGATCGGAACACGCGACAACCGGTCCTTTGATCACTCCACAT GTTGATCCGCGTGACGAGGGGATAGCCCGTGTGGAGGTAGAGCAACATGT CTTGAGTACTATCCCAACAGAAGAACTGGTCTCGGTAGTGCGCTTCTACC AGCAGGCGTCTTATAGTGTGTGGCCGGTTGTCAATGCAGAAGTGCTGTTG AACAAGCTTGAGCATGGCACGCCAGATATTGGAACCTTGTGTCTGGCCAT GGCTCTCTGTGCAGCCACCATGGCACAGCTGCAGCTTGCTCCGACAACTG TTGATAGCACGATGATGGCGGCGGAGTGTATGAGGATGCGTGAAGCGCAC CTTGATTTGAGGAGCGTCTTGGTCTCGTTCTTCCTGCATGTATATCATGC CAAGATCAACCAGAGGGACTCGGCCATGCGGTTCATACGAGAGGCTGTGT ATGGCGCTAGGCTGTTGAAGCTGGATGAAGGTGTGGGTGAGCAAGAGACT GCGCTCGGTGCAGATGTTGTTGCTAATAAAGAGATTGTATTCCTCTTGCT CTGGGTTTCTGAAAGCTGTTGAAGTGTTTCGAGATCGCCAACTCACTCGC GGATACTGTCCTGCTCACGCCATCGGTATCCACATACTCTGCCTTCCAGT TAGGGCCACACGACTTTCTGCACGCCTTATACCAGAAGCTGCTGCCTTTC CTGGAGCAAGATCTCATGTTGAAGTCGATACTGCATAGTAAGACGGCTGA GGCCTTGCTTAAAGCCCCCGCGCGCTTACTGGACTTGAACTATGACCCTT GGTCATTCGATGACGATAAAGATAACGCTTACACTACCGAAGAGCATGTG GACTCTCCTGAGCAGTACGTTGATTCGCGATGGGCTCTCTATTAAGGGCT ATGCTATGCATCTCGGTCTCGAACCATCATATACCAGTCCTATTCGCCTA CCCGATGAGGTCGATGTGGGAGATAGCGCGGATGCGAAAGGCCTGCTTGA GCTTGGCAGACTCTTTGCCACGTTCGATGGGTTTTCGTCCGGAAGGAGCA CAAATTCCAGAGATAAGCTAGTAATGACTGCGGATAGTCTTGCGAAGACG GAGACAGTTCTATCGATGCTTTCGTTCGGTAAAGGCGACCGACCTTCCAC CCGCATTGCGGATTATTGCATCACGAAAGAATGGATGAGGACTATCATCT GGCAGGAAGCTCTGTCTCGGCGTCTGCTCTCCTCGAAATCCGGTGCCCAG CTCATGACATTTAGATTCCCGGCGGTGGTTAGCCGTGACCTTTTGATGTC TCTACAAGGCTTTAATGAGTCTGACTTGCTGCCTTTGGGGCGCGACCAGA TGCGCCATCGACTCACAAAGCGTGCATGCGATGAGTGTATCTCCCGCAAG GTCAAGTGCAGCGGCGCCTGGCCCTGTGATACCTGCCAGAGTGCCCAAAA GCAAGTCAACTGCACTTACCTGAAACCTGCGCGGAGAAGGGGACCTAAGG TACGAAGGTATATCGGGGGTCAGGGATCGGAACACGCGACAACCGGTCCT TTGATCACTCCACATGTTGATCCGCGTGACGAGGGGATAGCCCGTGTGGA GGTAGAGCAACATGTCTTGAGTACTATCCCAACAGAAGAACTGGTCTCGG TAGTGCGCTTCTACCAGCAGGCGTCTTATAGTGTGTGGCCGGTTGTCAAT GCAGAAGTGCTGTTGAACAAGCTTGAGCATGGCACGCCAGATATTGGAAC CTTGTGTCTGGCCATGGCTCTCTGTGCAGCCACCATGGCACAGCTGCAGC TTGCTCCGACAACTGTTGATAGCACGATGATGGCGGCGGAGTGTATGAGG ATGCGTGAAGCGCACCTTGATTTGAGGAGCGTCTTGGTCTCGTTCTTCCT GCATGTATATCATGCCAAGATCAACCAGAGGGACTCGGCCATGCGGTTCA TACGAGAGGCTGTGTATGGCGCTAGGCTGTTGAAGCTGGATGAAGGTGTG GGTGAGCAAGAGACTGCGCTCGGTGCAGATGTTGTTGCTAATAAAGAGAT TGTATTCCTCTTGCTCTGGGTTTCTGAAAGCTGTTGAAGTGTTTCGAGAT CGCCAACTCACTCGCGGATACTGTCCTGCTCACGCCATCGGTATCCACAT ACTCTGCCTTCCAGTTAGGGCCACACGACTTTCTGCACGCCTTATACCAG AAGCTGCTGCCTTTCCTGGAGCAAGATCTCATGTTGAAGTCGATACTGCA TAGTAAGACGGCTGAGGCCTTGCTTAAAGCCCCCGCGCGCTTACTGGACT TGAACTATGACCCTTGGTCATTCGATGACGATAAAGATAACGCTTACACT ACCGAAGAGCATGTGGACTCTCCTGAGCAGTACGTTGATTCGCGATGGGC TCTCTATTAAGGGCTATGCTATGCATCTCGGTCTCGAACCATCATATACC AGTCCTATTCGCCTACCCGATGAGGTCGATGTGGGAGATAGCGCGGATGC GAAAGGCCTGCTTGAGCTTGGCAGACTCTTTGCCACGTTCGATGGGTTTT CGTCCGGAAGGAGCACAAATTCCAGAGATAAGCTAGTAATGACTGCGGAT AGTCTTGCGAAGACGGAGACAGTTCTATCGATGCTTTCGTTCGGTAAAGG CGACCGACCTTCCACCCGCATTGCGGATTATTGCATCACGAAAGAATGGA TGAGGACTATCATCTGGCAGGAAGCTCTGTCTCGGCGTCTGCTCTCCTCG AAATCCGGTGCCCAGCTCATGACATTTAGATTCCCGGCGGTGGTTAGCCG TGACCTTTTGATGTCTCTACAAGGCTTTAATGAGTCTGACTTGCTGCCTT TGGGGCGCGACCAGATGCGCCATCGACTCACAAAGCGTGCATGCGATGAG TGTATCTCCCGCAAGGTCAAGTGCAGCGGCGCCTGGCCCTGTGATACCTG CCAGAGTGCCCAAAAGCAAGTCAACTGCACTTACCTGAAACCTGCGCGGA GAAGGGGACCTAAGGTACGAAGGTATATCGGGGGTCAGGGATCGGAACAC GCGACAACCGGTCCTTTGATCACTCCACATGTTGATCCGCGTGACGAGGG GATAGCCCGTGTGGAGGTAGAGCAACATGTCTTGAGTACTATCCCAACAG AAGAACTGGTCTCGGTAGTGCGCTTCTACCAGCAGGCGTCTTATAGTGTG TGGCCGGTTGTCAATGCAGAAGTGCTGTTGAACAAGCTTGAGCATGGCAC GCCAGATATTGGAACCTTGTGTCTGGCCATGGCTCTCTGTGCAGCCACCA TGGCACAGCTGCAGCTTGCTCCGACAACTGTTGATAGCACGATGATGGCG GCGGAGTGTATGAGGATGCGTGAAGCGCACCTTGATTTGAGGAGCGTCTT GGTCTCGTTCTTCCTGCATGTATATCATGCCAAGATCAACCAGAGGGACT CGGCCATGCGGTTCATACGAGAGGCTGTGTATGGCGCTAGGCTGTTGAAG CTGGATGAAGGTGTGGGTGAGCAAGAGACTGCGCTCGGTGCAGATGTTGT TGCTAATAAAGAGATTGTATTCCTCTTGCTCTGGGTTTCTGAAAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
Term | Definition |
GO:0042025 | host cell nucleus |
Vocabulary: Molecular Function
Term | Definition |
GO:0008270 | zinc ion binding |
GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
Vocabulary: Biological Process
Term | Definition |
GO:0006355 | regulation of transcription, DNA-templated |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
Property Name | Value |
DBxref | InterPro:IPR036864 |
DBxref | InterPro:IPR001138 |
DBxref | PFAM:PF00172 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
An11 | supercontig | An11:1014916..1016535 - |
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