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Sequences
The following sequences are available for this feature:
mRNA from alignment at An11:1014916..1016535- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_006840-T1 ID=CBS51388_006840-T1|Name=CBS51388_006840-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1620bp|location=Sequence derived from alignment at An11:1014916..1016535- (Aspergillus niger CBS 513.88)
ATGCGCCATCGACTCACAAAGCGTGCATGCGATGAGTGTATCTCCCGCAA
GGTCAAGTGCAGCGGCGCCTGGCCCTGTGATACCTGCCAGAGTGCCCAAA
AGCAAGTCAACTGCACTTACCTGAAACCTGCGCGGAGAAGGGGACCTAAG
GTACGAAGGTATATCGGGGGTCAGGGATCGGAACACGCGACAACCGGTCC
TTTGATCACTCCACATGTTGATCCGCGTGACGAGGGGATAGCCCGTGTGG
AGGTAGAGCAACATGTCTTGAGTACTATCCCAACAGAAGAACTGGTCTCG
GTAGTGCGCTTCTACCAGCAGGCGTCTTATAGTGTGTGGCCGGTTGTCAA
TGCAGAAGTGCTGTTGAACAAGCTTGAGCATGGCACGCCAGATATTGGAA
CCTTGTGTCTGGCCATGGCTCTCTGTGCAGCCACCATGGCACAGCTGCAG
CTTGCTCCGACAACTGTTGATAGCACGATGATGGCGGCGGAGTGTATGAG
GATGCGTGAAGCGCACCTTGATTTGAGGAGCGTCTTGGTCTCGTTCTTCC
TGCATGTATATCATGCCAAGATCAACCAGAGGGACTCGGCCATGCGGTTC
ATACGAGAGGCTGTGTATGGCGCTAGGCTGTTGAAGCTGGATGAAGGTGT
GGGTGAGCAAGAGACTGCGCTCGGTGCAGATGTTGTTGCTAATAAAGAGA
TTGTATTCCTCTTGCTCTGGGTTTCTGAAAGGTAGAAATTCCTCTTCGCA
AGTCCACTGTAGTTCATACTGACATTGCTCAGGGGCTATGCTATGCATCT
CGGTCTCGAACCATCATATACCAGTCCTATTCGCCTACCCGATGAGGTCG
ATGTGGGAGATAGCGCGGATGCGAAAGGCCTGCTTGAGCTTGGCAGACTC
TTTGCCACGTTCGATGGGTTTTCGTCCGGAAGGAGCACAAATTCCAGAGA
TAAGCTAGTAATGACTGCGGATAGTCTTGCGAAGACGGAGACAGTTCTAT
CGATGCTTTCGTTCGGTAAAGGCGACCGACCTTCCACCCGCATTGCGGAT
TATTGCATCACGAAAGAATGGATGAGGACTATCATCTGGCAGGAAGCTCT
GTCTCGGCGTCTGCTCTCCTCGAAATCCGGTGCCCAGCTCATGACATTTA
GATTCCCGGCGGTGGTTAGCCGTGACCTTTTGATGTCTCTACAAGGCTTT
AATGAGTCTGACTTGCTGCCTTTGGGGCGCGACCAGGTTTGTTTTCGCGA
TTCTTGGGGCTGCCAGGTACTAATCGAATTCCGAGTTTAGCTGTTGAAGT
GTTTCGAGATCGCCAACTCACTCGCGGATACTGTCCTGCTCACGCCATCG
GTATCCACATACTCTGCCTTCCAGTTAGGGCCACACGACTTTCTGCACGC
CTTATACCAGAAGCTGCTGCCTTTCCTGGAGCAAGATCTCATGTTGAAGT
CGATACTGCATAGTAAGACGGCTGAGGCCTTGCTTAAAGCCCCCGCGCGC
TTACTGGACTTGAACTATGACCCTTGGTCATTCGATGACGATAAAGATAA
CGCTTACACTACCGAAGAGCATGTGGACTCTCCTGAGCAGTACGTTGATT
CGCGATGGGCTCTCTATTAA back to topCoding sequence (CDS) from alignment at An11:1014916..1016535- >CBS51388_006840-T1 ID=CBS51388_006840-T1|Name=CBS51388_006840-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4545bp|location=Sequence derived from alignment at An11:1014916..1016535- (Aspergillus niger CBS 513.88)
CTGTTGAAGTGTTTCGAGATCGCCAACTCACTCGCGGATACTGTCCTGCT
CACGCCATCGGTATCCACATACTCTGCCTTCCAGTTAGGGCCACACGACT
TTCTGCACGCCTTATACCAGAAGCTGCTGCCTTTCCTGGAGCAAGATCTC
ATGTTGAAGTCGATACTGCATAGTAAGACGGCTGAGGCCTTGCTTAAAGC
CCCCGCGCGCTTACTGGACTTGAACTATGACCCTTGGTCATTCGATGACG
ATAAAGATAACGCTTACACTACCGAAGAGCATGTGGACTCTCCTGAGCAG
TACGTTGATTCGCGATGGGCTCTCTATTAAGGGCTATGCTATGCATCTCG
GTCTCGAACCATCATATACCAGTCCTATTCGCCTACCCGATGAGGTCGAT
GTGGGAGATAGCGCGGATGCGAAAGGCCTGCTTGAGCTTGGCAGACTCTT
TGCCACGTTCGATGGGTTTTCGTCCGGAAGGAGCACAAATTCCAGAGATA
AGCTAGTAATGACTGCGGATAGTCTTGCGAAGACGGAGACAGTTCTATCG
ATGCTTTCGTTCGGTAAAGGCGACCGACCTTCCACCCGCATTGCGGATTA
TTGCATCACGAAAGAATGGATGAGGACTATCATCTGGCAGGAAGCTCTGT
CTCGGCGTCTGCTCTCCTCGAAATCCGGTGCCCAGCTCATGACATTTAGA
TTCCCGGCGGTGGTTAGCCGTGACCTTTTGATGTCTCTACAAGGCTTTAA
TGAGTCTGACTTGCTGCCTTTGGGGCGCGACCAGATGCGCCATCGACTCA
CAAAGCGTGCATGCGATGAGTGTATCTCCCGCAAGGTCAAGTGCAGCGGC
GCCTGGCCCTGTGATACCTGCCAGAGTGCCCAAAAGCAAGTCAACTGCAC
TTACCTGAAACCTGCGCGGAGAAGGGGACCTAAGGTACGAAGGTATATCG
GGGGTCAGGGATCGGAACACGCGACAACCGGTCCTTTGATCACTCCACAT
GTTGATCCGCGTGACGAGGGGATAGCCCGTGTGGAGGTAGAGCAACATGT
CTTGAGTACTATCCCAACAGAAGAACTGGTCTCGGTAGTGCGCTTCTACC
AGCAGGCGTCTTATAGTGTGTGGCCGGTTGTCAATGCAGAAGTGCTGTTG
AACAAGCTTGAGCATGGCACGCCAGATATTGGAACCTTGTGTCTGGCCAT
GGCTCTCTGTGCAGCCACCATGGCACAGCTGCAGCTTGCTCCGACAACTG
TTGATAGCACGATGATGGCGGCGGAGTGTATGAGGATGCGTGAAGCGCAC
CTTGATTTGAGGAGCGTCTTGGTCTCGTTCTTCCTGCATGTATATCATGC
CAAGATCAACCAGAGGGACTCGGCCATGCGGTTCATACGAGAGGCTGTGT
ATGGCGCTAGGCTGTTGAAGCTGGATGAAGGTGTGGGTGAGCAAGAGACT
GCGCTCGGTGCAGATGTTGTTGCTAATAAAGAGATTGTATTCCTCTTGCT
CTGGGTTTCTGAAAGCTGTTGAAGTGTTTCGAGATCGCCAACTCACTCGC
GGATACTGTCCTGCTCACGCCATCGGTATCCACATACTCTGCCTTCCAGT
TAGGGCCACACGACTTTCTGCACGCCTTATACCAGAAGCTGCTGCCTTTC
CTGGAGCAAGATCTCATGTTGAAGTCGATACTGCATAGTAAGACGGCTGA
GGCCTTGCTTAAAGCCCCCGCGCGCTTACTGGACTTGAACTATGACCCTT
GGTCATTCGATGACGATAAAGATAACGCTTACACTACCGAAGAGCATGTG
GACTCTCCTGAGCAGTACGTTGATTCGCGATGGGCTCTCTATTAAGGGCT
ATGCTATGCATCTCGGTCTCGAACCATCATATACCAGTCCTATTCGCCTA
CCCGATGAGGTCGATGTGGGAGATAGCGCGGATGCGAAAGGCCTGCTTGA
GCTTGGCAGACTCTTTGCCACGTTCGATGGGTTTTCGTCCGGAAGGAGCA
CAAATTCCAGAGATAAGCTAGTAATGACTGCGGATAGTCTTGCGAAGACG
GAGACAGTTCTATCGATGCTTTCGTTCGGTAAAGGCGACCGACCTTCCAC
CCGCATTGCGGATTATTGCATCACGAAAGAATGGATGAGGACTATCATCT
GGCAGGAAGCTCTGTCTCGGCGTCTGCTCTCCTCGAAATCCGGTGCCCAG
CTCATGACATTTAGATTCCCGGCGGTGGTTAGCCGTGACCTTTTGATGTC
TCTACAAGGCTTTAATGAGTCTGACTTGCTGCCTTTGGGGCGCGACCAGA
TGCGCCATCGACTCACAAAGCGTGCATGCGATGAGTGTATCTCCCGCAAG
GTCAAGTGCAGCGGCGCCTGGCCCTGTGATACCTGCCAGAGTGCCCAAAA
GCAAGTCAACTGCACTTACCTGAAACCTGCGCGGAGAAGGGGACCTAAGG
TACGAAGGTATATCGGGGGTCAGGGATCGGAACACGCGACAACCGGTCCT
TTGATCACTCCACATGTTGATCCGCGTGACGAGGGGATAGCCCGTGTGGA
GGTAGAGCAACATGTCTTGAGTACTATCCCAACAGAAGAACTGGTCTCGG
TAGTGCGCTTCTACCAGCAGGCGTCTTATAGTGTGTGGCCGGTTGTCAAT
GCAGAAGTGCTGTTGAACAAGCTTGAGCATGGCACGCCAGATATTGGAAC
CTTGTGTCTGGCCATGGCTCTCTGTGCAGCCACCATGGCACAGCTGCAGC
TTGCTCCGACAACTGTTGATAGCACGATGATGGCGGCGGAGTGTATGAGG
ATGCGTGAAGCGCACCTTGATTTGAGGAGCGTCTTGGTCTCGTTCTTCCT
GCATGTATATCATGCCAAGATCAACCAGAGGGACTCGGCCATGCGGTTCA
TACGAGAGGCTGTGTATGGCGCTAGGCTGTTGAAGCTGGATGAAGGTGTG
GGTGAGCAAGAGACTGCGCTCGGTGCAGATGTTGTTGCTAATAAAGAGAT
TGTATTCCTCTTGCTCTGGGTTTCTGAAAGCTGTTGAAGTGTTTCGAGAT
CGCCAACTCACTCGCGGATACTGTCCTGCTCACGCCATCGGTATCCACAT
ACTCTGCCTTCCAGTTAGGGCCACACGACTTTCTGCACGCCTTATACCAG
AAGCTGCTGCCTTTCCTGGAGCAAGATCTCATGTTGAAGTCGATACTGCA
TAGTAAGACGGCTGAGGCCTTGCTTAAAGCCCCCGCGCGCTTACTGGACT
TGAACTATGACCCTTGGTCATTCGATGACGATAAAGATAACGCTTACACT
ACCGAAGAGCATGTGGACTCTCCTGAGCAGTACGTTGATTCGCGATGGGC
TCTCTATTAAGGGCTATGCTATGCATCTCGGTCTCGAACCATCATATACC
AGTCCTATTCGCCTACCCGATGAGGTCGATGTGGGAGATAGCGCGGATGC
GAAAGGCCTGCTTGAGCTTGGCAGACTCTTTGCCACGTTCGATGGGTTTT
CGTCCGGAAGGAGCACAAATTCCAGAGATAAGCTAGTAATGACTGCGGAT
AGTCTTGCGAAGACGGAGACAGTTCTATCGATGCTTTCGTTCGGTAAAGG
CGACCGACCTTCCACCCGCATTGCGGATTATTGCATCACGAAAGAATGGA
TGAGGACTATCATCTGGCAGGAAGCTCTGTCTCGGCGTCTGCTCTCCTCG
AAATCCGGTGCCCAGCTCATGACATTTAGATTCCCGGCGGTGGTTAGCCG
TGACCTTTTGATGTCTCTACAAGGCTTTAATGAGTCTGACTTGCTGCCTT
TGGGGCGCGACCAGATGCGCCATCGACTCACAAAGCGTGCATGCGATGAG
TGTATCTCCCGCAAGGTCAAGTGCAGCGGCGCCTGGCCCTGTGATACCTG
CCAGAGTGCCCAAAAGCAAGTCAACTGCACTTACCTGAAACCTGCGCGGA
GAAGGGGACCTAAGGTACGAAGGTATATCGGGGGTCAGGGATCGGAACAC
GCGACAACCGGTCCTTTGATCACTCCACATGTTGATCCGCGTGACGAGGG
GATAGCCCGTGTGGAGGTAGAGCAACATGTCTTGAGTACTATCCCAACAG
AAGAACTGGTCTCGGTAGTGCGCTTCTACCAGCAGGCGTCTTATAGTGTG
TGGCCGGTTGTCAATGCAGAAGTGCTGTTGAACAAGCTTGAGCATGGCAC
GCCAGATATTGGAACCTTGTGTCTGGCCATGGCTCTCTGTGCAGCCACCA
TGGCACAGCTGCAGCTTGCTCCGACAACTGTTGATAGCACGATGATGGCG
GCGGAGTGTATGAGGATGCGTGAAGCGCACCTTGATTTGAGGAGCGTCTT
GGTCTCGTTCTTCCTGCATGTATATCATGCCAAGATCAACCAGAGGGACT
CGGCCATGCGGTTCATACGAGAGGCTGTGTATGGCGCTAGGCTGTTGAAG
CTGGATGAAGGTGTGGGTGAGCAAGAGACTGCGCTCGGTGCAGATGTTGT
TGCTAATAAAGAGATTGTATTCCTCTTGCTCTGGGTTTCTGAAAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0042025 | host cell nucleus |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR001138 |
| DBxref | PFAM:PF00172 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An11 | supercontig | An11:1014916..1016535 - |
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