|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at An11:1039828..1041825- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_006848-T1 ID=CBS51388_006848-T1|Name=CBS51388_006848-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1998bp|location=Sequence derived from alignment at An11:1039828..1041825- (Aspergillus niger CBS 513.88)
ATGGCAACTCCCAACCCACCTCGATGGTGTTTAATCGCTCCGTTTGCATT
GCAGGATCTTTGGTCGTCTGAAAAGGGACGACAGGCGCTGCAGGGCTTGT
CTGCCGTGAACTTTGGTGGCGCACCACTGTCCAGCGCCACGGGGAACGCA
ATTTCATCACATTTTCGCCTGCAGACATTGATGGGTAGCAGTGAGACCGG
TTACACACCAACACTTCTTTGTGAAGACCCCGCGGACTGGGCATGCTTCG
AATGGAATCCCGCCTTCGAACATTGCATGGAGGAAGTCGGTGATGGACTG
TGGGAGTTGGTCATCCCTCGACCTTCGTCCCGTCGGTATCATGGCATATT
TCACGCCTTTCCACATCTTAGCGAATATCGAACGGGTGATCGTTTTGAAC
CTCATCCAACAAAACCGCACTTATGGCGGTCAAAGGGGAGGGCAGATGAC
ATAATTGTTCTAAGCAACGGCGAAAAGCTCAACCCTATTGATGCCGAGCA
CCATCTTGAGTCCCATTCCTTAGTCCATCGCGCTGCCATTTTCGGCCAGG
ATCGATTCCAAGTGGCTTTGCTGGTTCAACCTAAATGGGATGAGCTCCCG
GAGACATGGACCCCGCAATGGCTGAAGCAGGCTCTGGAGCCCCTCATGAA
GGATGCCAATGGCTTGTTGCCTGCCCACGGACAAATCCATCATAATCGTG
TCGCAATTGCCTCTCGTGGCCGGCCATTTGCACTGGCCCCTAAGGGGTCC
CTTCGCCGGCGAGAAACAGCTCAGCTCTATGAGGATGTTGTCAATGCATT
ATATAGTGATGCAGCAGGGTACGAAGGCTCTACCCGCGACGTGAAAAAAT
TGCAAGAGTCGACTATGGAAGGCATCAAGCAGTGGCTACAAGAGACCGTT
TCTCGGATCTTGGGTGGCATTACTGTGGATATAGATGTGGACATTGTCAC
TCTAGGGATGGATTCCCTTCAGGTAGTTCGACTCGCCCAGGTACTGCAAG
ATGCGACCGATCGCATGGGTCAAACCAAGCAAATATCTATGTTGTGGACT
AGTGCAGCCATCTATGAGCAAGCGACGGTCCGGCGCCTCGCAAGTACGCT
GTTTCGACAAATAGGTGGCCATCTTGGAGCGGAAGGGGAGAAACACGCAG
TGAGCTTTTGGTCACGAGAGCATCAATTGACACACGCAATCTGGCAGCAG
GCACAGAGCCTTCAGCTCCGCGGGAAGACGGTCCTTCTGACCGGTTCGAC
TGGTGAGCTTGGCAGTTATCTCTTGGAGGAGCTGCTGCAGGATCCGACCA
TCACACATGTATATTGCCTCAATCGTTCGGCAGATGCGGAAACCCGACAG
CTCGCTAAATTCCGTGAAAAGCGGTTAGCTGATGGCTGGCTCGTGGAAAC
TTCTCGAGTCAAATTCTGGCAGGCTGACCTGAGCCAGGAAAGGCTTGGGC
TAACTGAAGAGGAATATAGTTACTTGCGGGAGCGAGTGGATATCATATTC
CATAATGCGTGGATGGTGAATTTCAATCTGCCATTGTCCAGCTTTCGTTC
TCAACTGGAAGGGACGGGACGGCTTCTCAACCTAATCAAGGGCTCAGCAC
GTCAGGCAGCATTCCATTTCATTTCTTCCATCGCGGCCGTTAGTGGTCGC
TCTACCATCCTGCCTGAAACTGATCACATTGCAGAAACACTGCATGGACC
GTCAACAGTACTGAGTCAAGGCTACGCAGAATCGAAATACGCAGCAGAAG
TTCTCTGTGACCTCGTCGCGAGGGAAACTCAACAGACGATTGCTATTCAT
CGTGTTGGTCAATTGGGAGGACCTGCAGATGCTGAGGCAGGAATGTGGAC
GACACGAGACTGGTTTCCGGCACTGGTACGAACATCTCAGACGATGAAAG
AGCTGCCTGACAGTATTGGTTCAATCCCAGTGGATTGGGTGCCCATTGTA
TGTGAGCCACTTCCCGAATATGTTCCTAGGAAATCTGTAGTGTACTAA back to topCoding sequence (CDS) from alignment at An11:1039828..1041825- >CBS51388_006848-T1 ID=CBS51388_006848-T1|Name=CBS51388_006848-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1998bp|location=Sequence derived from alignment at An11:1039828..1041825- (Aspergillus niger CBS 513.88)
ATGGCAACTCCCAACCCACCTCGATGGTGTTTAATCGCTCCGTTTGCATT
GCAGGATCTTTGGTCGTCTGAAAAGGGACGACAGGCGCTGCAGGGCTTGT
CTGCCGTGAACTTTGGTGGCGCACCACTGTCCAGCGCCACGGGGAACGCA
ATTTCATCACATTTTCGCCTGCAGACATTGATGGGTAGCAGTGAGACCGG
TTACACACCAACACTTCTTTGTGAAGACCCCGCGGACTGGGCATGCTTCG
AATGGAATCCCGCCTTCGAACATTGCATGGAGGAAGTCGGTGATGGACTG
TGGGAGTTGGTCATCCCTCGACCTTCGTCCCGTCGGTATCATGGCATATT
TCACGCCTTTCCACATCTTAGCGAATATCGAACGGGTGATCGTTTTGAAC
CTCATCCAACAAAACCGCACTTATGGCGGTCAAAGGGGAGGGCAGATGAC
ATAATTGTTCTAAGCAACGGCGAAAAGCTCAACCCTATTGATGCCGAGCA
CCATCTTGAGTCCCATTCCTTAGTCCATCGCGCTGCCATTTTCGGCCAGG
ATCGATTCCAAGTGGCTTTGCTGGTTCAACCTAAATGGGATGAGCTCCCG
GAGACATGGACCCCGCAATGGCTGAAGCAGGCTCTGGAGCCCCTCATGAA
GGATGCCAATGGCTTGTTGCCTGCCCACGGACAAATCCATCATAATCGTG
TCGCAATTGCCTCTCGTGGCCGGCCATTTGCACTGGCCCCTAAGGGGTCC
CTTCGCCGGCGAGAAACAGCTCAGCTCTATGAGGATGTTGTCAATGCATT
ATATAGTGATGCAGCAGGGTACGAAGGCTCTACCCGCGACGTGAAAAAAT
TGCAAGAGTCGACTATGGAAGGCATCAAGCAGTGGCTACAAGAGACCGTT
TCTCGGATCTTGGGTGGCATTACTGTGGATATAGATGTGGACATTGTCAC
TCTAGGGATGGATTCCCTTCAGGTAGTTCGACTCGCCCAGGTACTGCAAG
ATGCGACCGATCGCATGGGTCAAACCAAGCAAATATCTATGTTGTGGACT
AGTGCAGCCATCTATGAGCAAGCGACGGTCCGGCGCCTCGCAAGTACGCT
GTTTCGACAAATAGGTGGCCATCTTGGAGCGGAAGGGGAGAAACACGCAG
TGAGCTTTTGGTCACGAGAGCATCAATTGACACACGCAATCTGGCAGCAG
GCACAGAGCCTTCAGCTCCGCGGGAAGACGGTCCTTCTGACCGGTTCGAC
TGGTGAGCTTGGCAGTTATCTCTTGGAGGAGCTGCTGCAGGATCCGACCA
TCACACATGTATATTGCCTCAATCGTTCGGCAGATGCGGAAACCCGACAG
CTCGCTAAATTCCGTGAAAAGCGGTTAGCTGATGGCTGGCTCGTGGAAAC
TTCTCGAGTCAAATTCTGGCAGGCTGACCTGAGCCAGGAAAGGCTTGGGC
TAACTGAAGAGGAATATAGTTACTTGCGGGAGCGAGTGGATATCATATTC
CATAATGCGTGGATGGTGAATTTCAATCTGCCATTGTCCAGCTTTCGTTC
TCAACTGGAAGGGACGGGACGGCTTCTCAACCTAATCAAGGGCTCAGCAC
GTCAGGCAGCATTCCATTTCATTTCTTCCATCGCGGCCGTTAGTGGTCGC
TCTACCATCCTGCCTGAAACTGATCACATTGCAGAAACACTGCATGGACC
GTCAACAGTACTGAGTCAAGGCTACGCAGAATCGAAATACGCAGCAGAAG
TTCTCTGTGACCTCGTCGCGAGGGAAACTCAACAGACGATTGCTATTCAT
CGTGTTGGTCAATTGGGAGGACCTGCAGATGCTGAGGCAGGAATGTGGAC
GACACGAGACTGGTTTCCGGCACTGGTACGAACATCTCAGACGATGAAAG
AGCTGCCTGACAGTATTGGTTCAATCCCAGTGGATTGGGTGCCCATTGTA
TGTGAGCCACTTCCCGAATATGTTCCTAGGAAATCTGTAGTGTACTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0031177 | phosphopantetheine binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_11.6 |
| Note | SMCOG1010:NAD-dependent epimerase/dehydratase |
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR009081 |
| DBxref | InterPro:IPR036736 |
| DBxref | InterPro:IPR013120 |
| DBxref | InterPro:IPR020806 |
| DBxref | PFAM:PF07993 |
| DBxref | PFAM:PF01370 |
| Product | putative secondary metabolism biosynthetic enzyme |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An11 | supercontig | An11:1039828..1041825 - |
|
