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CBS51388_006882-T1, CBS51388_006882-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_006882-T1
Unique NameCBS51388_006882-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An11:1163996..1165105+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_006882-T1 ID=CBS51388_006882-T1|Name=CBS51388_006882-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1110bp|location=Sequence derived from alignment at An11:1163996..1165105+ (Aspergillus niger CBS 513.88)
ATGCCGTTCCTCGCTGGGAAGAAAATCACTCAGAACGGGTTGGGGCTTAT
GCGTCAGTTTTCCCTCGTTCCCTTCTCTTTGGGTTCTGTTTATTTTAGTC
CGGAGGCTTGTCTGCCACTCGCACTGTCATTGTAAAAGCTCATATATTGA
TAAAAACATATCGCAGGTTTCACCCTGCCAAACGACGTGACGCCAGATGA
ACAAGCATTCAAGGTCCTCAAGGCAGCGCTGGCAGCCGGCGTCAACGTAT
GGAATGGAGCAGACTTCTACGGGACACCCGACAACAACTCATTGCACCTC
ATGAACCGCTACTTCACAGCTTTTCCTGAAGACGCAGACAAGGTAGTCCT
TTCAATTAAGTCCGGCGTTGTGAGCATGAAGACCTTCACTATGGACTGCT
CACCCGCGGGACTTCGCGGCTTCGTGGACAACGCTCTCAAGATCCTGGAC
GGCAAGAAAAAGATCGACATTTTCGGCTGCGCGAGGGTTGATCCCAATGT
CCCAGTTGAAGAAAGCATCAAGGCGCTGGCTGAGCTAAAGGAAGAGGGTA
AGATCGGGGGTATCCAGCTGTCGGAGGTAAAAGCTGAGACTATTCGTCGT
GCGGCGAGCGTTGCGAAGATTGATATGCTAGAGGCCGAAGTTAGCCTTTG
GGCTACGGATGTTTTCCGCAATGGCGTCGCAGAGACGTGCGCGGAGCTTG
GTATTCCCATAATAGCCCATACACCGCTGGGAGCGGGGATGTTGACTGGC
ACGATAAAAAGCCCTGATGACTTGGCGGCGCACGATCATCATCGGCTTTT
CCCTCGGTTCCAGCCGGATAACCTTGCGAAGAATCGCCTGCTTGTTGATG
AGCTAGAGAAAATTGCGGCTGCGAAGGGGTGCACTCCGGCTCAGTTAGCT
TTGTCATGGATTAAAGTGCAGAGCAGAAAGCCTGAATTGCCGCTTTTTGT
CCCGGTTGCGGGTGCAAGATCTGAAGCCAGGGTTTTCGAAAATAGGAAGG
ATGTCGACCTAAGTGACGATGATCTTGCAAAGATTGAGATCCTCCAGGAG
AAATACCCAACCGCAGGGGAGAGATTTCCGCCTGCGGCTATGAAGTTGAA
CGAGTACTAG
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Coding sequence (CDS) from alignment at An11:1163996..1165105+

>CBS51388_006882-T1 ID=CBS51388_006882-T1|Name=CBS51388_006882-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1992bp|location=Sequence derived from alignment at An11:1163996..1165105+ (Aspergillus niger CBS 513.88)
ATGCCGTTCCTCGCTGGGAAGAAAATCACTCAGAACGGGTTGGGGCTTAT
GCGTTTCACCCTGCCAAACGACGTGACGCCAGATGAACAAGCATTCAAGG
TCCTCAAGGCAGCGCTGGCAGCCGGCGTCAACGTATGGAATGGAGCAGAC
TTCTACGGGACACCCGACAACAACTCATTGCACCTCATGAACCGCTACTT
CACAGCTTTTCCTGAAGACGCAGACAAGGTAGTCCTTTCAATTAAGTCCG
GCGTTGTGAGCATGAAGACCTTCACTATGGACTGCTCACCCGCGGGACTT
CGCGGCTTCGTGGACAACGCTCTCAAGATCCTGGACGGCAAGAAAAAGAT
CGACATTTTCGGCTGCGCGAGGGTTGATCCCAATGTCCCAGTTGAAGAAA
GCATCAAGGCGCTGGCTGAGCTAAAGGAAGAGGGTAAGATCGGGGGTATC
CAGCTGTCGGAGGTAAAAGCTGAGACTATTCGTCGTGCGGCGAGCGTTGC
GAAGATTGATATGCTAGAGGCCGAAGTTAGCCTTTGGGCTACGGATGTTT
TCCGCAATGGCGTCGCAGAGACGTGCGCGGAGCTTGGTATTCCCATAATA
GCCCATACACCGCTGGGAGCGGGGATGTTGACTGGCACGATAAAAAGCCC
TGATGACTTGGCGGCGCACGATCATCATCGGCTTTTCCCTCGGTTCCAGC
CGGATAACCTTGCGAAGAATCGCCTGCTTGTTGATGAGCTAGAGAAAATT
GCGGCTGCGAAGGGGTGCACTCCGGCTCAGTTAGCTTTGTCATGGATTAA
AGTGCAGAGCAGAAAGCCTGAATTGCCGCTTTTTGTCCCGGTTGCGGGTG
CAAGATCTGAAGCCAGGGTTTTCGAAAATAGGAAGGATGTCGACCTAAGT
GACGATGATCTTGCAAAGATTGAGATCCTCCAGGAGAAATACCCAACCGC
AGGGGAGAGATTTCCGCCTGCGGCTATGAAGTTGAACGAGTACTAGATGC
CGTTCCTCGCTGGGAAGAAAATCACTCAGAACGGGTTGGGGCTTATGCGT
TTCACCCTGCCAAACGACGTGACGCCAGATGAACAAGCATTCAAGGTCCT
CAAGGCAGCGCTGGCAGCCGGCGTCAACGTATGGAATGGAGCAGACTTCT
ACGGGACACCCGACAACAACTCATTGCACCTCATGAACCGCTACTTCACA
GCTTTTCCTGAAGACGCAGACAAGGTAGTCCTTTCAATTAAGTCCGGCGT
TGTGAGCATGAAGACCTTCACTATGGACTGCTCACCCGCGGGACTTCGCG
GCTTCGTGGACAACGCTCTCAAGATCCTGGACGGCAAGAAAAAGATCGAC
ATTTTCGGCTGCGCGAGGGTTGATCCCAATGTCCCAGTTGAAGAAAGCAT
CAAGGCGCTGGCTGAGCTAAAGGAAGAGGGTAAGATCGGGGGTATCCAGC
TGTCGGAGGTAAAAGCTGAGACTATTCGTCGTGCGGCGAGCGTTGCGAAG
ATTGATATGCTAGAGGCCGAAGTTAGCCTTTGGGCTACGGATGTTTTCCG
CAATGGCGTCGCAGAGACGTGCGCGGAGCTTGGTATTCCCATAATAGCCC
ATACACCGCTGGGAGCGGGGATGTTGACTGGCACGATAAAAAGCCCTGAT
GACTTGGCGGCGCACGATCATCATCGGCTTTTCCCTCGGTTCCAGCCGGA
TAACCTTGCGAAGAATCGCCTGCTTGTTGATGAGCTAGAGAAAATTGCGG
CTGCGAAGGGGTGCACTCCGGCTCAGTTAGCTTTGTCATGGATTAAAGTG
CAGAGCAGAAAGCCTGAATTGCCGCTTTTTGTCCCGGTTGCGGGTGCAAG
ATCTGAAGCCAGGGTTTTCGAAAATAGGAAGGATGTCGACCTAAGTGACG
ATGATCTTGCAAAGATTGAGATCCTCCAGGAGAAATACCCAACCGCAGGG
GAGAGATTTCCGCCTGCGGCTATGAAGTTGAACGAGTACTAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_006882CBS51388_006882Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006882-T1.exon1CBS51388_006882-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_006882-T1.exon2CBS51388_006882-T1.exon2Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006882-T1.cdsCBS51388_006882-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006882-T1CBS51388_006882-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR023210
DBxrefInterPro:IPR036812
DBxrefPFAM:PF00248
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An11supercontigAn11:1163996..1165105 +
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