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CBS51388_006883-T1, CBS51388_006883-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_006883-T1
Unique NameCBS51388_006883-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An11:1165148..1166661-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_006883-T1 ID=CBS51388_006883-T1|Name=CBS51388_006883-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1514bp|location=Sequence derived from alignment at An11:1165148..1166661- (Aspergillus niger CBS 513.88)
ATGGTATATCGTGGCAGGCCTTCTAAGTCATGCCGCGAATGCCGCAAACG
TGATATCAAAGTATGATGTTTTCTTCTACTTCTTCACCTTGACGACTGAA
CCAGGCTTACACCTCTCGATAGTGCGATAAAAAGGAAGATGGCTGCTCCC
AATGTGTCCGCGCTGGTCTGAAGTGCTCGGGATACCAAAAGTTAACAGAT
ATAGTCATACTTAATGAGACCTCTGCTACGGCAGAAAAAGTACTGAAGAA
GCACTCTTTAGGAGGTCCAGCTTCTGCAGGGCCTCTATCAACAAATCTTC
TTCCGACTGTTTTACAACGTGCGAAGCACCTATATGTCTCGCAATACGTT
CAAGACACACCTGCAACGGGTATGTACTCGTATATGCAGGTCTTCTACCC
GTCCAAATCAGACGACTATCCTCTTCTCGAGACCATGATTCATGCGCTTT
TCATGGCCACGTTCTCATCTCTTCAGGGATGGCCCCCAGCTCTCTATCAT
GCTCGAAACAACTATGGATTAGCTTTGTCATTGACTCGAAAGGCGATCCG
GTCACCAAAAGAGGCTTTGTTGGATAGAACCTTATTCTCGGTGCTGCTCA
TGAGCATATTTGAACGGCTCGCCAACGTAGAACAAGGAGCGCTATGTATA
CGCAACGGACATTTGATAGGTGCAGTTGAGCTTATGGCCTTGAGGGGTAA
TGGTCAATTTACAGACGAAGGGGGTGTTGCGATGTTTTTGCATCTAACAG
AGCTTGTTGTTCTTGATTGCCTTGCCAATGAAGTTGATATCCCTTCCCGG
TTTTTGGCATTGCGACAACAAGCTCTTGAAGCCGGTGCGGACACATCGTC
ACTAAGGTGGAGATTCTTGGAAGTTATGATGTGGTATGCACAGCTGGAGT
ACACCGCGAAATCTTCCACTTCCGCAGAAGATGTAATTTATCAAGCCAAA
GCACTTGACGCAGAACTTGATCGACTGTCCAAGCACCTGCCTTCTTTCTT
CTCGAGAAAACAGAGTCCTGAACCCCCAAGCATCCCGCCAACCAAGCCGG
ACATATATCCTGATTACAATACACAAAGATGCTGGAACAACATCCGTATA
CTTCGCATTCAGCTAATGAAGCTTATACGTGATCGATGTGCTCAGGCCTT
GGGAGATTCCGCCGATGACACCTGGATCATGGCTGAAGTTCATGACTCTA
ACCGCCGAGCAAATTTGCTTGCTACAGACATGTGCCTTTCCATACCTGGT
AAGGGCGCCCACAGCATGCTTCTATATGAGGTCTCCAATGTCCAATCAGC
TACACTCTTGTTTCATCTACATGTGGCCAAAGAGGTTCTTCCAAAGCCAG
CTCAATCGAGGCTATCCATTCAGGAGCGATTACAATTCTTGAAAGTGAAG
CAATCTCCCTCACAGCAGAGAACATTGGATCGTTTGCTTCATAATGATTA
TCAGATGCCGCGGAATATCTGGAGAGTGTGGCTTCTCATTGGGAGAGAGG
ATTTCTCGATCTGA
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Coding sequence (CDS) from alignment at An11:1165148..1166661-

>CBS51388_006883-T1 ID=CBS51388_006883-T1|Name=CBS51388_006883-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2904bp|location=Sequence derived from alignment at An11:1165148..1166661- (Aspergillus niger CBS 513.88)
TGCGATAAAAAGGAAGATGGCTGCTCCCAATGTGTCCGCGCTGGTCTGAA
GTGCTCGGGATACCAAAAGTTAACAGATATAGTCATACTTAATGAGACCT
CTGCTACGGCAGAAAAAGTACTGAAGAAGCACTCTTTAGGAGGTCCAGCT
TCTGCAGGGCCTCTATCAACAAATCTTCTTCCGACTGTTTTACAACGTGC
GAAGCACCTATATGTCTCGCAATACGTTCAAGACACACCTGCAACGGGTA
TGTACTCGTATATGCAGGTCTTCTACCCGTCCAAATCAGACGACTATCCT
CTTCTCGAGACCATGATTCATGCGCTTTTCATGGCCACGTTCTCATCTCT
TCAGGGATGGCCCCCAGCTCTCTATCATGCTCGAAACAACTATGGATTAG
CTTTGTCATTGACTCGAAAGGCGATCCGGTCACCAAAAGAGGCTTTGTTG
GATAGAACCTTATTCTCGGTGCTGCTCATGAGCATATTTGAACGGCTCGC
CAACGTAGAACAAGGAGCGCTATGTATACGCAACGGACATTTGATAGGTG
CAGTTGAGCTTATGGCCTTGAGGGGTAATGGTCAATTTACAGACGAAGGG
GGTGTTGCGATGTTTTTGCATCTAACAGAGCTTGTTGTTCTTGATTGCCT
TGCCAATGAAGTTGATATCCCTTCCCGGTTTTTGGCATTGCGACAACAAG
CTCTTGAAGCCGGTGCGGACACATCGTCACTAAGGTGGAGATTCTTGGAA
GTTATGATGTGGTATGCACAGCTGGAGTACACCGCGAAATCTTCCACTTC
CGCAGAAGATGTAATTTATCAAGCCAAAGCACTTGACGCAGAACTTGATC
GACTGTCCAAGCACCTGCCTTCTTTCTTCTCGAGAAAACAGAGTCCTGAA
CCCCCAAGCATCCCGCCAACCAAGCCGGACATATATCCTGATTACAATAC
ACAAAGATGCTGGAACAACATCCGTATACTTCGCATTCAGCTAATGAAGC
TTATACGTGATCGATGTGCTCAGGCCTTGGGAGATTCCGCCGATGACACC
TGGATCATGGCTGAAGTTCATGACTCTAACCGCCGAGCAAATTTGCTTGC
TACAGACATGTGCCTTTCCATACCTGGTAAGGGCGCCCACAGCATGCTTC
TATATGAGGTCTCCAATGTCCAATCAGCTACACTCTTGTTTCATCTACAT
GTGGCCAAAGAGGTTCTTCCAAAGCCAGCTCAATCGAGGCTATCCATTCA
GGAGCGATTACAATTCTTGAAAGTGAAGCAATCTCCCTCACAGCAGAGAA
CATTGGATCGTTTGCTTCATAATGATTATCAGATGCCGCGGAATATCTGG
AGAGTGTGGCTTCTCATTGGGAGAGAGGATTTCTCGATCTGAATGGTATA
TCGTGGCAGGCCTTCTAAGTCATGCCGCGAATGCCGCAAACGTGATATCA
AATGCGATAAAAAGGAAGATGGCTGCTCCCAATGTGTCCGCGCTGGTCTG
AAGTGCTCGGGATACCAAAAGTTAACAGATATAGTCATACTTAATGAGAC
CTCTGCTACGGCAGAAAAAGTACTGAAGAAGCACTCTTTAGGAGGTCCAG
CTTCTGCAGGGCCTCTATCAACAAATCTTCTTCCGACTGTTTTACAACGT
GCGAAGCACCTATATGTCTCGCAATACGTTCAAGACACACCTGCAACGGG
TATGTACTCGTATATGCAGGTCTTCTACCCGTCCAAATCAGACGACTATC
CTCTTCTCGAGACCATGATTCATGCGCTTTTCATGGCCACGTTCTCATCT
CTTCAGGGATGGCCCCCAGCTCTCTATCATGCTCGAAACAACTATGGATT
AGCTTTGTCATTGACTCGAAAGGCGATCCGGTCACCAAAAGAGGCTTTGT
TGGATAGAACCTTATTCTCGGTGCTGCTCATGAGCATATTTGAACGGCTC
GCCAACGTAGAACAAGGAGCGCTATGTATACGCAACGGACATTTGATAGG
TGCAGTTGAGCTTATGGCCTTGAGGGGTAATGGTCAATTTACAGACGAAG
GGGGTGTTGCGATGTTTTTGCATCTAACAGAGCTTGTTGTTCTTGATTGC
CTTGCCAATGAAGTTGATATCCCTTCCCGGTTTTTGGCATTGCGACAACA
AGCTCTTGAAGCCGGTGCGGACACATCGTCACTAAGGTGGAGATTCTTGG
AAGTTATGATGTGGTATGCACAGCTGGAGTACACCGCGAAATCTTCCACT
TCCGCAGAAGATGTAATTTATCAAGCCAAAGCACTTGACGCAGAACTTGA
TCGACTGTCCAAGCACCTGCCTTCTTTCTTCTCGAGAAAACAGAGTCCTG
AACCCCCAAGCATCCCGCCAACCAAGCCGGACATATATCCTGATTACAAT
ACACAAAGATGCTGGAACAACATCCGTATACTTCGCATTCAGCTAATGAA
GCTTATACGTGATCGATGTGCTCAGGCCTTGGGAGATTCCGCCGATGACA
CCTGGATCATGGCTGAAGTTCATGACTCTAACCGCCGAGCAAATTTGCTT
GCTACAGACATGTGCCTTTCCATACCTGGTAAGGGCGCCCACAGCATGCT
TCTATATGAGGTCTCCAATGTCCAATCAGCTACACTCTTGTTTCATCTAC
ATGTGGCCAAAGAGGTTCTTCCAAAGCCAGCTCAATCGAGGCTATCCATT
CAGGAGCGATTACAATTCTTGAAAGTGAAGCAATCTCCCTCACAGCAGAG
AACATTGGATCGTTTGCTTCATAATGATTATCAGATGCCGCGGAATATCT
GGAGAGTGTGGCTTCTCATTGGGAGAGAGGATTTCTCGATCTGAATGGTA
TATCGTGGCAGGCCTTCTAAGTCATGCCGCGAATGCCGCAAACGTGATAT
CAAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0042025host cell nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_006883CBS51388_006883Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006883-T1CBS51388_006883-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006883-T1.cdsCBS51388_006883-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006883-T1.exon2CBS51388_006883-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_006883-T1.exon1CBS51388_006883-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An11supercontigAn11:1165148..1166661 -
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