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CBS51388_006919-T1, CBS51388_006919-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_006919-T1
Unique NameCBS51388_006919-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An11:1278169..1281073-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_006919-T1 ID=CBS51388_006919-T1|Name=CBS51388_006919-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2905bp|location=Sequence derived from alignment at An11:1278169..1281073- (Aspergillus niger CBS 513.88)
ATGCCATCCACAACCACTGCCATCCACACCAGCCGCCGACGCGTGTTCAA
CTCCGTCCTCCCTTCCGCGTCCCTAGAAGATTTCCCATCCGCAGGCCTCG
CAATCGGACCTACAACCTCCACTCTCTTTCCGACATTCTCCTCCGGCACG
AAAACCCGCGATAGCAGCTCGCAGTTTCGATCTTCGGTAACGTCAGATAA
GACCGACATAGATGAGCCATGGATGGACCAAGCGACACTGGATCGCGCCT
GGCAGGTTGCGACAACCTTCCTTGCCATCCCGGACTGCGGGTTCGACATA
CTCTACCGATATGAAGATATAGGAGAGGCGAAGTTCTTGCGATTGACGAA
TCGCGATAAGAAGCCTTCGCGGGAGGTGATTGAGGCGTTCGAGTACTTGA
TGAAGCCTTTTACAATGGGATTGGACGTGGCGGAGGATATGGCGCAAAGG
AACATACTGGACTGGTATGCGTATGAGATGCGGAGGCACTTTTTGAAGAA
TTTTAGGGGCGGGCTGTATAAGGTAGGATGCAAATCTGGGGTTCTTCAAA
TTATGTGCGTGGTGCTGATCGTGGAGTGTACAGCTTCTAAATTATCCTCA
CAAAGAAAGGTTGCTACATAAGATCGTGGACTGCTTGCAGTTGGCAAGGA
GGTTATACTTTTCGCACTTGATGGAATATCTGCTGCCGCTTCTGGATACT
CCCGATCAGGAGCCTATGTTCGTTAAGCTCCGGACGTCCTTCCACATGAT
GGTGGCTTATGCGTTGCCGTGGTCGTTGAGGTCCACGTTGCTGACTCATG
TGATTACTACGGAGGCACTGGTTATCCTCGGAATTGATAAGCTGGGTGAG
GAGAGAGATGCCGACGAGTCAGGGAGCGTTGATGACATGGAGGTCGATCG
GCAATTCTCGGTCTCGTACCAGGACTGGCGAAATGAGCCCTCTGTCGATG
CCAGAATGATGCTGATGGCCGGAGAGGATGCGCGTGTCAGTGCGTCTCGA
GAGATCCTCCTGGTGCTCTTTGATGGGCTACAGATGGTTGGGATGGGCGG
CGATAAGGCGCAGAAGGTCTTTGCTAGTGTCATGGACACCATGCTGAGCG
AGTTCATTCGAGCGGCATACACCGGGCAATGGGAAGGGCCGTCACTAGTC
GTCCAGCATTTACGGCACTGGATTGAGAATGTTTTCGCGCGGCTGGTCGT
GCAAGTCCTAGCAATTATCAACACCCCCGAATCTGGTGTGAGGGAACCGG
ATAGTCTCGATGTGAATCTGAGTGACGTGGAGAAGTGGCAGGAAGTCGGA
ATTTCTCGCCTCGGGGCTCTCCGGGCAGGCGAACTCTTTGATATCATTGT
CGAGTGGCCTGCGAGCAGTGGAGCCATCGAAGATTTACGACACTTTACTA
CATATCCAGCAGCGCGGTCCCACCTGACGCACTCTTTTATTGCCGTTCTC
AATCAACGATTGCTGCACCCAGGTGCTTCTACCGTCGAAATTCTGCAGGT
GTATATCTCCATTATACGAGCATTCAACCTGCTAGATCCTAAGGGGGTGC
TTCTGGATCGGATTGCTCGGCCCATTCGCAGATATCTTCGCGACCGCGAC
GACACAGTCAAAGTCATAGTTGGCGGACTCTTGTCTGACCCGGCCGATGC
TGATGGACAAACTGCTTCACACACGGATACACTGGTGGAGTTGTCAGCTG
AATTGACCAAAGCACACCAGAATTCGCTGCGAGCTGATAGTGGGGAGCTC
GACTGGGATGACATGAACTGGGTACCCGATCCGGTCGATGCGGCACCAGA
CTATCGGAAGTCGAAAACGTCCGACGTTATTGGAAGCCTTATCAGTCTGT
TCGAGTCCAAGGAGATGTTTGTCAAGGAGATGCAGAACATGCTGGGCGAG
CGGCTACTACAGAAGCGCGCCGACTTTGACCAGGAGATGTCCGTTCTGGA
ACTTCTCAAGGTGCGCTTTGGCGACAATGCCTTGCAAGCCTGTGAAGTCA
TGCTGCGGGACATTTTTGACTCCCGTCGCGTTGACGCCGTTATACGCAAT
GATCAAGGATTGAGCGGGAAGCGCAAGGCCGCGCCACTGCCAGTTACTCC
TGATGGTAGACAAGCGCCAGAGGACGAGGAAGACATGCCAGAGCTTCACG
CCAAGATCCTGTCCCACTTCTTCTGGCCTGAGATTCAAGGGCTGGAATTT
AATGTTCCAGAGGAGATTTCTTCGCTCCAGCAGCGATACGCGCAAGGATT
CGGATCGCTCAAGCAGTCGCGCAAGCTCACCTGGCTGAATGGACTCGGAC
AGGTCACTGTCGAGCTAGATCTCGAGGATCGTGTGTTCATGGACGAGGTT
ACCACCTGGCAAGCTACGGTGATCTACGCCTTCAATTCTGAGTCGGATGA
GGCCGTGACCAGGACAACGGACGAACTCGCCGGTGAACTTGGGATGTCGA
CTGCACTCGTGCGAAGCGCATGTCTCTTCTGGGTAAGCAAGCGCATTCTA
ATGGAAACACAGCGGGATACATTCCGAGTCCTGGAAGTTCTTCCGAGCGA
GGAGGGAGATGCATCAGGCGGAGAGCCCGGGTTACCTGGCGCAGGTGATG
CGGAGGATCAGTCTGCAGAAACAGCACAAGCAGCAGCCGAGGCCGATGCG
GCCGCGGCAGCAGCAGCGAAGGAAACGGCCGAAGCGGCGGCGATGGAGAA
GATGAATCTCTATTGGCAATTCATTGTGGGCATGTTGACCAACCAGGGCG
CAATGCCACTGCAACGAATCGTGATGATGCTAAAGATTGCCGTTCCGGGG
GGATTCCCGTATAGCAACGAGGAGCTGCGAGAGTTCCTGGCTGGGATGGT
CTCCAAAGGCAAGCTGGAAATTATCAGCGGAGGTAACTACAAAATTGTGC
AGTGA
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Coding sequence (CDS) from alignment at An11:1278169..1281073-

>CBS51388_006919-T1 ID=CBS51388_006919-T1|Name=CBS51388_006919-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=5688bp|location=Sequence derived from alignment at An11:1278169..1281073- (Aspergillus niger CBS 513.88)
CTTCTAAATTATCCTCACAAAGAAAGGTTGCTACATAAGATCGTGGACTG
CTTGCAGTTGGCAAGGAGGTTATACTTTTCGCACTTGATGGAATATCTGC
TGCCGCTTCTGGATACTCCCGATCAGGAGCCTATGTTCGTTAAGCTCCGG
ACGTCCTTCCACATGATGGTGGCTTATGCGTTGCCGTGGTCGTTGAGGTC
CACGTTGCTGACTCATGTGATTACTACGGAGGCACTGGTTATCCTCGGAA
TTGATAAGCTGGGTGAGGAGAGAGATGCCGACGAGTCAGGGAGCGTTGAT
GACATGGAGGTCGATCGGCAATTCTCGGTCTCGTACCAGGACTGGCGAAA
TGAGCCCTCTGTCGATGCCAGAATGATGCTGATGGCCGGAGAGGATGCGC
GTGTCAGTGCGTCTCGAGAGATCCTCCTGGTGCTCTTTGATGGGCTACAG
ATGGTTGGGATGGGCGGCGATAAGGCGCAGAAGGTCTTTGCTAGTGTCAT
GGACACCATGCTGAGCGAGTTCATTCGAGCGGCATACACCGGGCAATGGG
AAGGGCCGTCACTAGTCGTCCAGCATTTACGGCACTGGATTGAGAATGTT
TTCGCGCGGCTGGTCGTGCAAGTCCTAGCAATTATCAACACCCCCGAATC
TGGTGTGAGGGAACCGGATAGTCTCGATGTGAATCTGAGTGACGTGGAGA
AGTGGCAGGAAGTCGGAATTTCTCGCCTCGGGGCTCTCCGGGCAGGCGAA
CTCTTTGATATCATTGTCGAGTGGCCTGCGAGCAGTGGAGCCATCGAAGA
TTTACGACACTTTACTACATATCCAGCAGCGCGGTCCCACCTGACGCACT
CTTTTATTGCCGTTCTCAATCAACGATTGCTGCACCCAGGTGCTTCTACC
GTCGAAATTCTGCAGGTGTATATCTCCATTATACGAGCATTCAACCTGCT
AGATCCTAAGGGGGTGCTTCTGGATCGGATTGCTCGGCCCATTCGCAGAT
ATCTTCGCGACCGCGACGACACAGTCAAAGTCATAGTTGGCGGACTCTTG
TCTGACCCGGCCGATGCTGATGGACAAACTGCTTCACACACGGATACACT
GGTGGAGTTGTCAGCTGAATTGACCAAAGCACACCAGAATTCGCTGCGAG
CTGATAGTGGGGAGCTCGACTGGGATGACATGAACTGGGTACCCGATCCG
GTCGATGCGGCACCAGACTATCGGAAGTCGAAAACGTCCGACGTTATTGG
AAGCCTTATCAGTCTGTTCGAGTCCAAGGAGATGTTTGTCAAGGAGATGC
AGAACATGCTGGGCGAGCGGCTACTACAGAAGCGCGCCGACTTTGACCAG
GAGATGTCCGTTCTGGAACTTCTCAAGGTGCGCTTTGGCGACAATGCCTT
GCAAGCCTGTGAAGTCATGCTGCGGGACATTTTTGACTCCCGTCGCGTTG
ACGCCGTTATACGCAATGATCAAGGATTGAGCGGGAAGCGCAAGGCCGCG
CCACTGCCAGTTACTCCTGATGGTAGACAAGCGCCAGAGGACGAGGAAGA
CATGCCAGAGCTTCACGCCAAGATCCTGTCCCACTTCTTCTGGCCTGAGA
TTCAAGGGCTGGAATTTAATGTTCCAGAGGAGATTTCTTCGCTCCAGCAG
CGATACGCGCAAGGATTCGGATCGCTCAAGCAGTCGCGCAAGCTCACCTG
GCTGAATGGACTCGGACAGGTCACTGTCGAGCTAGATCTCGAGGATCGTG
TGTTCATGGACGAGGTTACCACCTGGCAAGCTACGGTGATCTACGCCTTC
AATTCTGAGTCGGATGAGGCCGTGACCAGGACAACGGACGAACTCGCCGG
TGAACTTGGGATGTCGACTGCACTCGTGCGAAGCGCATGTCTCTTCTGGG
TAAGCAAGCGCATTCTAATGGAAACACAGCGGGATACATTCCGAGTCCTG
GAAGTTCTTCCGAGCGAGGAGGGAGATGCATCAGGCGGAGAGCCCGGGTT
ACCTGGCGCAGGTGATGCGGAGGATCAGTCTGCAGAAACAGCACAAGCAG
CAGCCGAGGCCGATGCGGCCGCGGCAGCAGCAGCGAAGGAAACGGCCGAA
GCGGCGGCGATGGAGAAGATGAATCTCTATTGGCAATTCATTGTGGGCAT
GTTGACCAACCAGGGCGCAATGCCACTGCAACGAATCGTGATGATGCTAA
AGATTGCCGTTCCGGGGGGATTCCCGTATAGCAACGAGGAGCTGCGAGAG
TTCCTGGCTGGGATGGTCTCCAAAGGCAAGCTGGAAATTATCAGCGGAGG
TAACTACAAAATTGTGCAGTGAATGCCATCCACAACCACTGCCATCCACA
CCAGCCGCCGACGCGTGTTCAACTCCGTCCTCCCTTCCGCGTCCCTAGAA
GATTTCCCATCCGCAGGCCTCGCAATCGGACCTACAACCTCCACTCTCTT
TCCGACATTCTCCTCCGGCACGAAAACCCGCGATAGCAGCTCGCAGTTTC
GATCTTCGGTAACGTCAGATAAGACCGACATAGATGAGCCATGGATGGAC
CAAGCGACACTGGATCGCGCCTGGCAGGTTGCGACAACCTTCCTTGCCAT
CCCGGACTGCGGGTTCGACATACTCTACCGATATGAAGATATAGGAGAGG
CGAAGTTCTTGCGATTGACGAATCGCGATAAGAAGCCTTCGCGGGAGGTG
ATTGAGGCGTTCGAGTACTTGATGAAGCCTTTTACAATGGGATTGGACGT
GGCGGAGGATATGGCGCAAAGGAACATACTGGACTGGTATGCGTATGAGA
TGCGGAGGCACTTTTTGAAGAATTTTAGGGGCGGGCTGTATAAGCTTCTA
AATTATCCTCACAAAGAAAGGTTGCTACATAAGATCGTGGACTGCTTGCA
GTTGGCAAGGAGGTTATACTTTTCGCACTTGATGGAATATCTGCTGCCGC
TTCTGGATACTCCCGATCAGGAGCCTATGTTCGTTAAGCTCCGGACGTCC
TTCCACATGATGGTGGCTTATGCGTTGCCGTGGTCGTTGAGGTCCACGTT
GCTGACTCATGTGATTACTACGGAGGCACTGGTTATCCTCGGAATTGATA
AGCTGGGTGAGGAGAGAGATGCCGACGAGTCAGGGAGCGTTGATGACATG
GAGGTCGATCGGCAATTCTCGGTCTCGTACCAGGACTGGCGAAATGAGCC
CTCTGTCGATGCCAGAATGATGCTGATGGCCGGAGAGGATGCGCGTGTCA
GTGCGTCTCGAGAGATCCTCCTGGTGCTCTTTGATGGGCTACAGATGGTT
GGGATGGGCGGCGATAAGGCGCAGAAGGTCTTTGCTAGTGTCATGGACAC
CATGCTGAGCGAGTTCATTCGAGCGGCATACACCGGGCAATGGGAAGGGC
CGTCACTAGTCGTCCAGCATTTACGGCACTGGATTGAGAATGTTTTCGCG
CGGCTGGTCGTGCAAGTCCTAGCAATTATCAACACCCCCGAATCTGGTGT
GAGGGAACCGGATAGTCTCGATGTGAATCTGAGTGACGTGGAGAAGTGGC
AGGAAGTCGGAATTTCTCGCCTCGGGGCTCTCCGGGCAGGCGAACTCTTT
GATATCATTGTCGAGTGGCCTGCGAGCAGTGGAGCCATCGAAGATTTACG
ACACTTTACTACATATCCAGCAGCGCGGTCCCACCTGACGCACTCTTTTA
TTGCCGTTCTCAATCAACGATTGCTGCACCCAGGTGCTTCTACCGTCGAA
ATTCTGCAGGTGTATATCTCCATTATACGAGCATTCAACCTGCTAGATCC
TAAGGGGGTGCTTCTGGATCGGATTGCTCGGCCCATTCGCAGATATCTTC
GCGACCGCGACGACACAGTCAAAGTCATAGTTGGCGGACTCTTGTCTGAC
CCGGCCGATGCTGATGGACAAACTGCTTCACACACGGATACACTGGTGGA
GTTGTCAGCTGAATTGACCAAAGCACACCAGAATTCGCTGCGAGCTGATA
GTGGGGAGCTCGACTGGGATGACATGAACTGGGTACCCGATCCGGTCGAT
GCGGCACCAGACTATCGGAAGTCGAAAACGTCCGACGTTATTGGAAGCCT
TATCAGTCTGTTCGAGTCCAAGGAGATGTTTGTCAAGGAGATGCAGAACA
TGCTGGGCGAGCGGCTACTACAGAAGCGCGCCGACTTTGACCAGGAGATG
TCCGTTCTGGAACTTCTCAAGGTGCGCTTTGGCGACAATGCCTTGCAAGC
CTGTGAAGTCATGCTGCGGGACATTTTTGACTCCCGTCGCGTTGACGCCG
TTATACGCAATGATCAAGGATTGAGCGGGAAGCGCAAGGCCGCGCCACTG
CCAGTTACTCCTGATGGTAGACAAGCGCCAGAGGACGAGGAAGACATGCC
AGAGCTTCACGCCAAGATCCTGTCCCACTTCTTCTGGCCTGAGATTCAAG
GGCTGGAATTTAATGTTCCAGAGGAGATTTCTTCGCTCCAGCAGCGATAC
GCGCAAGGATTCGGATCGCTCAAGCAGTCGCGCAAGCTCACCTGGCTGAA
TGGACTCGGACAGGTCACTGTCGAGCTAGATCTCGAGGATCGTGTGTTCA
TGGACGAGGTTACCACCTGGCAAGCTACGGTGATCTACGCCTTCAATTCT
GAGTCGGATGAGGCCGTGACCAGGACAACGGACGAACTCGCCGGTGAACT
TGGGATGTCGACTGCACTCGTGCGAAGCGCATGTCTCTTCTGGGTAAGCA
AGCGCATTCTAATGGAAACACAGCGGGATACATTCCGAGTCCTGGAAGTT
CTTCCGAGCGAGGAGGGAGATGCATCAGGCGGAGAGCCCGGGTTACCTGG
CGCAGGTGATGCGGAGGATCAGTCTGCAGAAACAGCACAAGCAGCAGCCG
AGGCCGATGCGGCCGCGGCAGCAGCAGCGAAGGAAACGGCCGAAGCGGCG
GCGATGGAGAAGATGAATCTCTATTGGCAATTCATTGTGGGCATGTTGAC
CAACCAGGGCGCAATGCCACTGCAACGAATCGTGATGATGCTAAAGATTG
CCGTTCCGGGGGGATTCCCGTATAGCAACGAGGAGCTGCGAGAGTTCCTG
GCTGGGATGGTCTCCAAAGGCAAGCTGGAAATTATCAGCGGAGGTAACTA
CAAAATTGTGCAGTGAATGCCATCCACAACCACTGCCATCCACACCAGCC
GCCGACGCGTGTTCAACTCCGTCCTCCCTTCCGCGTCCCTAGAAGATTTC
CCATCCGCAGGCCTCGCAATCGGACCTACAACCTCCACTCTCTTTCCGAC
ATTCTCCTCCGGCACGAAAACCCGCGATAGCAGCTCGCAGTTTCGATCTT
CGGTAACGTCAGATAAGACCGACATAGATGAGCCATGGATGGACCAAGCG
ACACTGGATCGCGCCTGGCAGGTTGCGACAACCTTCCTTGCCATCCCGGA
CTGCGGGTTCGACATACTCTACCGATATGAAGATATAGGAGAGGCGAAGT
TCTTGCGATTGACGAATCGCGATAAGAAGCCTTCGCGGGAGGTGATTGAG
GCGTTCGAGTACTTGATGAAGCCTTTTACAATGGGATTGGACGTGGCGGA
GGATATGGCGCAAAGGAACATACTGGACTGGTATGCGTATGAGATGCGGA
GGCACTTTTTGAAGAATTTTAGGGGCGGGCTGTATAAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0031625ubiquitin protein ligase binding
Vocabulary: Biological Process
TermDefinition
GO:0006511ubiquitin-dependent protein catabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_006919CBS51388_006919Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006919-T1CBS51388_006919-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006919-T1.cdsCBS51388_006919-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006919-T1.exon2CBS51388_006919-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_006919-T1.exon1CBS51388_006919-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
NoteBUSCO:EOG09260FKU
DBxrefInterPro:IPR036317
DBxrefInterPro:IPR036390
DBxrefInterPro:IPR036388
DBxrefInterPro:IPR001373
DBxrefInterPro:IPR016158
DBxrefInterPro:IPR014786
DBxrefPFAM:PF08672
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An11supercontigAn11:1278169..1281073 -
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