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Sequences
The following sequences are available for this feature:
mRNA from alignment at An11:1292467..1293312- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_006923-T1 ID=CBS51388_006923-T1|Name=CBS51388_006923-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=846bp|location=Sequence derived from alignment at An11:1292467..1293312- (Aspergillus niger CBS 513.88)
ATGGCCGACGCCGCACAGCAACGGACGCTCGCGACTGCCTTTGCCCCGCC
GCCTCCGCTATGGAAACACTTCACGCCCGATAATCTGAAGAGACTCGAGG
AGATCAAGAAGGAGGCATCCAAAGGCGAGGATGGGAAACCGCAGAAGAAG
AAGTGGTCGCCTGCCGAATTGCGCGCTCTCGATCTACCACCAGAGCTCCG
GCTTCTCGTGCCACCAGCGATCCCTGACACCGGCCATTACAGCGTGTTCG
GAGAGCTTCAGAACGTAAGTCTTCGATCATTCTGCCACTGTGTCTCTGCT
GCTCACACATCACCACAGCTTTCGACAGCTTTACCGTCCCTGAAAGATCA
AGGCATTACCCAGCTATACCCTTCCTCCTCCCCGGCAGATACCGACCGTC
AATCTCCCTCAGAGCCTTCGCGGCCGCTCAATCACGCATACTACCTCCTC
AAAATCAGCAAATCTCTTCTTTTAAACTTCCTCGAATTTGTCGGCGTTCT
ATCAGTATCCCCGGAGCAGTTCGAATCCAAAGTCGAGGACTTGCGTAACC
TCTTCATCAACGCACATCATCTCCTCAACTTGTACAGACCACACCAAGCT
AGGGAATCCCTGATCATGATGATGGAAGAGCAATTGAGTCGAACCAAGGA
AGAAATTCAGCAGATGGACAAACTGAAAGCCGAGATAACGGGTGTTCTAG
AGCGGTTGGAAGCAGATGGCATCGCTGCGCAGTCACATCCCCAGCAGACC
GATGAGGACGGCAGAAAGGAGTCTGAAACCAGTCAAAAGACCATCGAAGA
TGCACAATTAGTGTGGGATCTCCTGGATGGGAAGATTGAGGGTTGA back to topCoding sequence (CDS) from alignment at An11:1292467..1293312- >CBS51388_006923-T1 ID=CBS51388_006923-T1|Name=CBS51388_006923-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1584bp|location=Sequence derived from alignment at An11:1292467..1293312- (Aspergillus niger CBS 513.88)
CTTTCGACAGCTTTACCGTCCCTGAAAGATCAAGGCATTACCCAGCTATA
CCCTTCCTCCTCCCCGGCAGATACCGACCGTCAATCTCCCTCAGAGCCTT
CGCGGCCGCTCAATCACGCATACTACCTCCTCAAAATCAGCAAATCTCTT
CTTTTAAACTTCCTCGAATTTGTCGGCGTTCTATCAGTATCCCCGGAGCA
GTTCGAATCCAAAGTCGAGGACTTGCGTAACCTCTTCATCAACGCACATC
ATCTCCTCAACTTGTACAGACCACACCAAGCTAGGGAATCCCTGATCATG
ATGATGGAAGAGCAATTGAGTCGAACCAAGGAAGAAATTCAGCAGATGGA
CAAACTGAAAGCCGAGATAACGGGTGTTCTAGAGCGGTTGGAAGCAGATG
GCATCGCTGCGCAGTCACATCCCCAGCAGACCGATGAGGACGGCAGAAAG
GAGTCTGAAACCAGTCAAAAGACCATCGAAGATGCACAATTAGTGTGGGA
TCTCCTGGATGGGAAGATTGAGGGTTGAATGGCCGACGCCGCACAGCAAC
GGACGCTCGCGACTGCCTTTGCCCCGCCGCCTCCGCTATGGAAACACTTC
ACGCCCGATAATCTGAAGAGACTCGAGGAGATCAAGAAGGAGGCATCCAA
AGGCGAGGATGGGAAACCGCAGAAGAAGAAGTGGTCGCCTGCCGAATTGC
GCGCTCTCGATCTACCACCAGAGCTCCGGCTTCTCGTGCCACCAGCGATC
CCTGACACCGGCCATTACAGCGTGTTCGGAGAGCTTCAGAACCTTTCGAC
AGCTTTACCGTCCCTGAAAGATCAAGGCATTACCCAGCTATACCCTTCCT
CCTCCCCGGCAGATACCGACCGTCAATCTCCCTCAGAGCCTTCGCGGCCG
CTCAATCACGCATACTACCTCCTCAAAATCAGCAAATCTCTTCTTTTAAA
CTTCCTCGAATTTGTCGGCGTTCTATCAGTATCCCCGGAGCAGTTCGAAT
CCAAAGTCGAGGACTTGCGTAACCTCTTCATCAACGCACATCATCTCCTC
AACTTGTACAGACCACACCAAGCTAGGGAATCCCTGATCATGATGATGGA
AGAGCAATTGAGTCGAACCAAGGAAGAAATTCAGCAGATGGACAAACTGA
AAGCCGAGATAACGGGTGTTCTAGAGCGGTTGGAAGCAGATGGCATCGCT
GCGCAGTCACATCCCCAGCAGACCGATGAGGACGGCAGAAAGGAGTCTGA
AACCAGTCAAAAGACCATCGAAGATGCACAATTAGTGTGGGATCTCCTGG
ATGGGAAGATTGAGGGTTGAATGGCCGACGCCGCACAGCAACGGACGCTC
GCGACTGCCTTTGCCCCGCCGCCTCCGCTATGGAAACACTTCACGCCCGA
TAATCTGAAGAGACTCGAGGAGATCAAGAAGGAGGCATCCAAAGGCGAGG
ATGGGAAACCGCAGAAGAAGAAGTGGTCGCCTGCCGAATTGCGCGCTCTC
GATCTACCACCAGAGCTCCGGCTTCTCGTGCCACCAGCGATCCCTGACAC
CGGCCATTACAGCGTGTTCGGAGAGCTTCAGAAC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016592 | mediator complex |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006357 | regulation of transcription by RNA polymerase II |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003712 | transcription coregulator activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG0926587S |
| DBxref | InterPro:IPR037212 |
| DBxref | InterPro:IPR009244 |
| DBxref | PFAM:PF05983 |
| Product | Mediator of RNA polymerase II transcription subunit 7 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An11 | supercontig | An11:1292467..1293312 - |
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