You are here

CBS51388_006935-T1, CBS51388_006935-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_006935-T1
Unique NameCBS51388_006935-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An11:1325051..1325563-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_006935-T1 ID=CBS51388_006935-T1|Name=CBS51388_006935-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=513bp|location=Sequence derived from alignment at An11:1325051..1325563- (Aspergillus niger CBS 513.88)
ATGGACCCCCGAGTAGGCGTAGGCGTCTTCGTCATCAACCACAAGGGACA GTTAGTTCTTGGCCAGCGCAAAAGCAGCCACGGCGCTGGTAAGTAATACC CTCACTAGAGTCGATTCATTCAATTTGGTCATATCATTAGTACACACTTA ACCTCAATCTCACTACTTACACCTCTACACAGGTACCTGGGCCCTACCCG GCGGCCATCTCGAATTCAATGAGTCCTTCGAAGACTGTGCGGCACGTGAA GTATTAGAAGAGACAGGCCTCAATGTGCGCGACATACAATTCCTCACAGC AACCAATGACATCATGAAAGATGAGGGGAAGCACTATGTCACTGTTTTTG TGGCATGTACTGTTGTGGGAGATGATGCGCAGCCGGAGGTTAGTGATGTA ACACCTACTTGCGATTTCTTCTTGTACAAAAAGGGAATACGTGCATATAC CGTCAGCTAATCATTCCTTCCAGGTATTGGAACCTCACAAGTGTGAGCAG TGGAAGTGGGTGA
back to top

Coding sequence (CDS) from alignment at An11:1325051..1325563-

>CBS51388_006935-T1 ID=CBS51388_006935-T1|Name=CBS51388_006935-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1053bp|location=Sequence derived from alignment at An11:1325051..1325563- (Aspergillus niger CBS 513.88)
CTAATCATTCCTTCCAGGTATTGGAACCTCACAAGTGTGAGCAGTGGAAG
TGGGTGAGTACCTGGGCCCTACCCGGCGGCCATCTCGAATTCAATGAGTC
CTTCGAAGACTGTGCGGCACGTGAAGTATTAGAAGAGACAGGCCTCAATG
TGCGCGACATACAATTCCTCACAGCAACCAATGACATCATGAAAGATGAG
GGGAAGCACTATGTCACTGTTTTTGTGGCATGTACTGTTGTGGGAGATGA
TGCGCAGCCGGAGATGGACCCCCGAGTAGGCGTAGGCGTCTTCGTCATCA
ACCACAAGGGACAGTTAGTTCTTGGCCAGCGCAAAAGCAGCCACGGCGCT
GCTAATCATTCCTTCCAGGTATTGGAACCTCACAAGTGTGAGCAGTGGAA
GTGGGTGAGTACCTGGGCCCTACCCGGCGGCCATCTCGAATTCAATGAGT
CCTTCGAAGACTGTGCGGCACGTGAAGTATTAGAAGAGACAGGCCTCAAT
GTGCGCGACATACAATTCCTCACAGCAACCAATGACATCATGAAAGATGA
GGGGAAGCACTATGTCACTGTTTTTGTGGCATGTACTGTTGTGGGAGATG
ATGCGCAGCCGGAGATGGACCCCCGAGTAGGCGTAGGCGTCTTCGTCATC
AACCACAAGGGACAGTTAGTTCTTGGCCAGCGCAAAAGCAGCCACGGCGC
TGCTAATCATTCCTTCCAGGTATTGGAACCTCACAAGTGTGAGCAGTGGA
AGTGGGTGAGTACCTGGGCCCTACCCGGCGGCCATCTCGAATTCAATGAG
TCCTTCGAAGACTGTGCGGCACGTGAAGTATTAGAAGAGACAGGCCTCAA
TGTGCGCGACATACAATTCCTCACAGCAACCAATGACATCATGAAAGATG
AGGGGAAGCACTATGTCACTGTTTTTGTGGCATGTACTGTTGTGGGAGAT
GATGCGCAGCCGGAGATGGACCCCCGAGTAGGCGTAGGCGTCTTCGTCAT
CAACCACAAGGGACAGTTAGTTCTTGGCCAGCGCAAAAGCAGCCACGGCG
CTG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_006935CBS51388_006935Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006935-T1CBS51388_006935-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006935-T1.cdsCBS51388_006935-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006935-T1.exon3CBS51388_006935-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_006935-T1.exon2CBS51388_006935-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_006935-T1.exon1CBS51388_006935-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
NoteantiSMASH:Cluster_11.7
DBxrefInterPro:IPR015797
DBxrefInterPro:IPR020084
DBxrefInterPro:IPR000086
DBxrefInterPro:IPR020476
DBxrefPFAM:PF00293
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An11supercontigAn11:1325051..1325563 -