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Sequences
The following sequences are available for this feature:
mRNA from alignment at An11:1332092..1333614- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_006938-T1 ID=CBS51388_006938-T1|Name=CBS51388_006938-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1523bp|location=Sequence derived from alignment at An11:1332092..1333614- (Aspergillus niger CBS 513.88)
ATGACCGAGATAGACCAGGAGGAGGGTCCCCAGACAAAGCGGAGAAAAGT
CCGCAAGGGCACGCGAAGTTGCTGGGAGTGTAAGCGGCGCAAGGTCCGGT
GCATCTTCAGCCCCTCCACCGGTACTATCTGCGATAACTGCAGACGACGG
GGATCTACATGCATCAGTCAGGAGCTCCCAGACAGCCCAGTATTTACGAG
TAATGACACGGTTGATGCTCGACTCGACCGAGTGGAGAGGTTCCTCGCAC
AGCTGGTTAGCCCGGGCGCTACCCAAACTGTATCTTCCGAAGATCACTCT
GAAACTCCACCGACTTCTGGGACGTTAGACAATCATATGGAATCTAATCA
AGAAGAACATGTGAGTACAGTCCTGACATATAAATTCTAATTACCTAGAG
CTGAGGCCCCAAGAGCCGTTACCAGTTAACAGCATCACCACCGGCCAATA
TGCATGCATTAATCGCGACCTTCTCGAGGCATGGCCCAGCCAGAGGGATC
TGAACCATATCTACACCCTCCCTGTTGGAATATCAACGTACATGAGCTAT
GGAATCTGCGCCCCTAACTTCACCTCCACAAACCATGACCTACCGTCATC
CAAAGAAATGCTCCAACTACCTCCACCGACCTCCCACCCCGTCCTAATCG
CCCGCAAACTACTCACTCTGGGCATCTTCCTCCAAGGCATTCCCCCATCC
TCCATCCAAGCCCTAGCCGACCTATCCATCTCCCACCACGACATCATGTC
CCGCGCCGTCACCCGCGCCACCAGACTAGTAACGACCAACGATGAACTCA
CCCCTTCCATCGAAGGCGTGCAATGCATCATGCTCGAAGCCCAATACCAG
AACTTTCTCGGCAACCTGCATCAAGCATGGCTGGCCACTCGCAGAGCCAC
AGCCATCGCACAAATGCTGTCTCTCCACCGTGGACTCCCACCATCATCCC
TAAAGACTCTCGACCCAGCCACCCGCAACACCCTAAACCCAGACTACCTG
TGCTTCCGCCTCGTCGAAATGGACCATTACCTCTCCCTGATGCTCGGCCT
CCCACCCACCTCCCTTGAGGCACGGTATCTCTCCCCAAAAGCCCTAGAGA
CATGCACGCCGCAAGACCGCATGCACCGCATGCACTGCATCGTGGCAGGA
CGCATACTCCACCGCACAGACGGCGACATCAATAACCTCTCCCTCACCCA
GGATATTGACTCCATGCTCCAAAACGCAGCTGCCCAAATGCCTCCCCAGT
GGTGGCTCATTCCAGACCTATTACCCAGCCATACTCCCAAAGACGCCATC
CACAACACCCTCCGTCTTACTCACCACTTCACGCACTATCAACTCCTCCT
CCGCCTGCACCTGCCCTACATGCTCCGCTCATCCCAAGATACTACGGTGT
ACGACCAAAGTAAACTCACCATCATAACCGTAAGTCGCGAGATTCTCTCC
CGATATATCGCTTTCCGCACCTCGGATCCAGCGCAGTATTACTGCCGTGG
GGTGGATTTCATTGCTTTTGTAG back to topCoding sequence (CDS) from alignment at An11:1332092..1333614- >CBS51388_006938-T1 ID=CBS51388_006938-T1|Name=CBS51388_006938-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4311bp|location=Sequence derived from alignment at An11:1332092..1333614- (Aspergillus niger CBS 513.88)
CGCAGTATTACTGCCGTGGGGTGGATTTCATTGCTTTTGTAGAGCTGAGG
CCCCAAGAGCCGTTACCAGTTAACAGCATCACCACCGGCCAATATGCATG
CATTAATCGCGACCTTCTCGAGGCATGGCCCAGCCAGAGGGATCTGAACC
ATATCTACACCCTCCCTGTTGGAATATCAACGTACATGAGCTATGGAATC
TGCGCCCCTAACTTCACCTCCACAAACCATGACCTACCGTCATCCAAAGA
AATGCTCCAACTACCTCCACCGACCTCCCACCCCGTCCTAATCGCCCGCA
AACTACTCACTCTGGGCATCTTCCTCCAAGGCATTCCCCCATCCTCCATC
CAAGCCCTAGCCGACCTATCCATCTCCCACCACGACATCATGTCCCGCGC
CGTCACCCGCGCCACCAGACTAGTAACGACCAACGATGAACTCACCCCTT
CCATCGAAGGCGTGCAATGCATCATGCTCGAAGCCCAATACCAGAACTTT
CTCGGCAACCTGCATCAAGCATGGCTGGCCACTCGCAGAGCCACAGCCAT
CGCACAAATGCTGTCTCTCCACCGTGGACTCCCACCATCATCCCTAAAGA
CTCTCGACCCAGCCACCCGCAACACCCTAAACCCAGACTACCTGTGCTTC
CGCCTCGTCGAAATGGACCATTACCTCTCCCTGATGCTCGGCCTCCCACC
CACCTCCCTTGAGGCACGGTATCTCTCCCCAAAAGCCCTAGAGACATGCA
CGCCGCAAGACCGCATGCACCGCATGCACTGCATCGTGGCAGGACGCATA
CTCCACCGCACAGACGGCGACATCAATAACCTCTCCCTCACCCAGGATAT
TGACTCCATGCTCCAAAACGCAGCTGCCCAAATGCCTCCCCAGTGGTGGC
TCATTCCAGACCTATTACCCAGCCATACTCCCAAAGACGCCATCCACAAC
ACCCTCCGTCTTACTCACCACTTCACGCACTATCAACTCCTCCTCCGCCT
GCACCTGCCCTACATGCTCCGCTCATCCCAAGATACTACGGTGTACGACC
AAAGTAAACTCACCATCATAACCATGACCGAGATAGACCAGGAGGAGGGT
CCCCAGACAAAGCGGAGAAAAGTCCGCAAGGGCACGCGAAGTTGCTGGGA
GTGTAAGCGGCGCAAGGTCCGGTGCATCTTCAGCCCCTCCACCGGTACTA
TCTGCGATAACTGCAGACGACGGGGATCTACATGCATCAGTCAGGAGCTC
CCAGACAGCCCAGTATTTACGAGTAATGACACGGTTGATGCTCGACTCGA
CCGAGTGGAGAGGTTCCTCGCACAGCTGGTTAGCCCGGGCGCTACCCAAA
CTGTATCTTCCGAAGATCACTCTGAAACTCCACCGACTTCTGGGACGTTA
GACAATCATATGGAATCTAATCAAGAAGAACATGTGACGCAGTATTACTG
CCGTGGGGTGGATTTCATTGCTTTTGTAGAGCTGAGGCCCCAAGAGCCGT
TACCAGTTAACAGCATCACCACCGGCCAATATGCATGCATTAATCGCGAC
CTTCTCGAGGCATGGCCCAGCCAGAGGGATCTGAACCATATCTACACCCT
CCCTGTTGGAATATCAACGTACATGAGCTATGGAATCTGCGCCCCTAACT
TCACCTCCACAAACCATGACCTACCGTCATCCAAAGAAATGCTCCAACTA
CCTCCACCGACCTCCCACCCCGTCCTAATCGCCCGCAAACTACTCACTCT
GGGCATCTTCCTCCAAGGCATTCCCCCATCCTCCATCCAAGCCCTAGCCG
ACCTATCCATCTCCCACCACGACATCATGTCCCGCGCCGTCACCCGCGCC
ACCAGACTAGTAACGACCAACGATGAACTCACCCCTTCCATCGAAGGCGT
GCAATGCATCATGCTCGAAGCCCAATACCAGAACTTTCTCGGCAACCTGC
ATCAAGCATGGCTGGCCACTCGCAGAGCCACAGCCATCGCACAAATGCTG
TCTCTCCACCGTGGACTCCCACCATCATCCCTAAAGACTCTCGACCCAGC
CACCCGCAACACCCTAAACCCAGACTACCTGTGCTTCCGCCTCGTCGAAA
TGGACCATTACCTCTCCCTGATGCTCGGCCTCCCACCCACCTCCCTTGAG
GCACGGTATCTCTCCCCAAAAGCCCTAGAGACATGCACGCCGCAAGACCG
CATGCACCGCATGCACTGCATCGTGGCAGGACGCATACTCCACCGCACAG
ACGGCGACATCAATAACCTCTCCCTCACCCAGGATATTGACTCCATGCTC
CAAAACGCAGCTGCCCAAATGCCTCCCCAGTGGTGGCTCATTCCAGACCT
ATTACCCAGCCATACTCCCAAAGACGCCATCCACAACACCCTCCGTCTTA
CTCACCACTTCACGCACTATCAACTCCTCCTCCGCCTGCACCTGCCCTAC
ATGCTCCGCTCATCCCAAGATACTACGGTGTACGACCAAAGTAAACTCAC
CATCATAACCATGACCGAGATAGACCAGGAGGAGGGTCCCCAGACAAAGC
GGAGAAAAGTCCGCAAGGGCACGCGAAGTTGCTGGGAGTGTAAGCGGCGC
AAGGTCCGGTGCATCTTCAGCCCCTCCACCGGTACTATCTGCGATAACTG
CAGACGACGGGGATCTACATGCATCAGTCAGGAGCTCCCAGACAGCCCAG
TATTTACGAGTAATGACACGGTTGATGCTCGACTCGACCGAGTGGAGAGG
TTCCTCGCACAGCTGGTTAGCCCGGGCGCTACCCAAACTGTATCTTCCGA
AGATCACTCTGAAACTCCACCGACTTCTGGGACGTTAGACAATCATATGG
AATCTAATCAAGAAGAACATGTGACGCAGTATTACTGCCGTGGGGTGGAT
TTCATTGCTTTTGTAGAGCTGAGGCCCCAAGAGCCGTTACCAGTTAACAG
CATCACCACCGGCCAATATGCATGCATTAATCGCGACCTTCTCGAGGCAT
GGCCCAGCCAGAGGGATCTGAACCATATCTACACCCTCCCTGTTGGAATA
TCAACGTACATGAGCTATGGAATCTGCGCCCCTAACTTCACCTCCACAAA
CCATGACCTACCGTCATCCAAAGAAATGCTCCAACTACCTCCACCGACCT
CCCACCCCGTCCTAATCGCCCGCAAACTACTCACTCTGGGCATCTTCCTC
CAAGGCATTCCCCCATCCTCCATCCAAGCCCTAGCCGACCTATCCATCTC
CCACCACGACATCATGTCCCGCGCCGTCACCCGCGCCACCAGACTAGTAA
CGACCAACGATGAACTCACCCCTTCCATCGAAGGCGTGCAATGCATCATG
CTCGAAGCCCAATACCAGAACTTTCTCGGCAACCTGCATCAAGCATGGCT
GGCCACTCGCAGAGCCACAGCCATCGCACAAATGCTGTCTCTCCACCGTG
GACTCCCACCATCATCCCTAAAGACTCTCGACCCAGCCACCCGCAACACC
CTAAACCCAGACTACCTGTGCTTCCGCCTCGTCGAAATGGACCATTACCT
CTCCCTGATGCTCGGCCTCCCACCCACCTCCCTTGAGGCACGGTATCTCT
CCCCAAAAGCCCTAGAGACATGCACGCCGCAAGACCGCATGCACCGCATG
CACTGCATCGTGGCAGGACGCATACTCCACCGCACAGACGGCGACATCAA
TAACCTCTCCCTCACCCAGGATATTGACTCCATGCTCCAAAACGCAGCTG
CCCAAATGCCTCCCCAGTGGTGGCTCATTCCAGACCTATTACCCAGCCAT
ACTCCCAAAGACGCCATCCACAACACCCTCCGTCTTACTCACCACTTCAC
GCACTATCAACTCCTCCTCCGCCTGCACCTGCCCTACATGCTCCGCTCAT
CCCAAGATACTACGGTGTACGACCAAAGTAAACTCACCATCATAACCATG
ACCGAGATAGACCAGGAGGAGGGTCCCCAGACAAAGCGGAGAAAAGTCCG
CAAGGGCACGCGAAGTTGCTGGGAGTGTAAGCGGCGCAAGGTCCGGTGCA
TCTTCAGCCCCTCCACCGGTACTATCTGCGATAACTGCAGACGACGGGGA
TCTACATGCATCAGTCAGGAGCTCCCAGACAGCCCAGTATTTACGAGTAA
TGACACGGTTGATGCTCGACTCGACCGAGTGGAGAGGTTCCTCGCACAGC
TGGTTAGCCCGGGCGCTACCCAAACTGTATCTTCCGAAGATCACTCTGAA
ACTCCACCGACTTCTGGGACGTTAGACAATCATATGGAATCTAATCAAGA
AGAACATGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0042025 | host cell nucleus |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_11.7 |
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR001138 |
| DBxref | PFAM:PF00172 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An11 | supercontig | An11:1332092..1333614 - |
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