You are here

Home

CBS51388_006950-T1, CBS51388_006950-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_006950-T1
Unique NameCBS51388_006950-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An11:1373855..1375516-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_006950-T1 ID=CBS51388_006950-T1|Name=CBS51388_006950-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1662bp|location=Sequence derived from alignment at An11:1373855..1375516- (Aspergillus niger CBS 513.88)
ATGCCTGACTCTTACGATTACATCATTGTCGGTGGAGGTCTGACGGGCTG
TGCTTTGGCTGGTCGGCTGGCTGAGAAAGACAAGTCATTACAAATCCTGA
TCATTGAAGCCGGACCCAACGTCGTCGATCATCCTCTCACCAGTACCCCG
TTGGCATGCTTTGGAGCTCATCACTCGCCTTTGGACTGGGACTACACCAC
GGTGCCACAGAAGCACCTCAACAGTCGTGAATGCTACAACGCGGCAGGGA
AGGCTCTGGGTGGAGGCACAGCGATAAACTACGGCACCTGGACCCGTGGT
AACGCTGCCGACTACAATCTCTGGGCAAAGCTGGTCGGGGATTTTAGCTG
GGGCTACAAAGGTCTACTTCCTTACTTCAAGCGTGTCGAGACGCATTACG
ATCGTAATGTCGACACGACAATTCACGGCACCAGGGGCCCCATCACCAAC
ACGATTGTCGCACTCACCAGCCCGGACCGAAAATATCCTCTGAAAGAGCC
AGTCCGCTCTGCATGGGAACGTATTGGCGTCAAGTTCAACCCAGATGCAA
ACGCTGGAAGCCCGCTGGGTCTAGCTCACTTTGGAGAGAACTGGCGTGAA
GGACAGCGTCAGCTTGCCAGTGAAGCATATGGATTGTCTCGGCGTCAAGG
AATATCCATTGTCACTGATACACTGGTGGCAAAGGTAATTCTCAAGGAGC
AAGATGGTCAACAGGTCGCGACAGGAGTCCAAGTAGTCAATGGAGAAGAA
TACCATGCCAGAAGAGAGGTGATCATTTCTGCTGGAACATACCGTACCCC
TCAGCTCCTCATGCTCTCTGGCATTGGGCCCGCAGAAGAGCTGGCAAAAC
ACAGCATCCCACAACTTGTGAACTCTCCAGAAGTGGGTCGAAACTTCCAT
GATCACATGTGTTTCCCCCAATGGTGGACACTGCGTCACCCCGAACAAGG
TCTCTCTATGGGGACGCCCCTTTGGGACAGTCCCGCGTATGGCATGGGGG
TACCTTATGATTGGAACGTGACGCTGCAGACGCCTACAGAGGAGTTGATC
AAAGCATTTCAAGCAGACGACGGGCAAATCCCGCCCAAGGACCATCCATA
CCTGGACACGGACTTTGCGCACTCCGAGGTTCTGGTTATATACGCACCGA
TGAGTCGCGCTGTGACTGGCTTTGAAACAGCCATGGATGGTACACACATA
AGCACGGCGGTTCTTTTGATGGCTCCGACAGCACGAGGCCAGATCACTCT
GGCCGATACAGATCCGGCCAGTGCACCTCTCATTGATCCCAACTACTGTT
CCAAGGAAGTGGACCGAGCCATTCTACGAGACGGGATTCGGAGAGTTGCC
AAGCTCATCCTGGACACGCCGGAGGGTCAAGACATGGTGGAGCACGAAGT
GACCAGACCCGGCAATGAACCTATGAGACTCGATTCCACTGACGAGGAAA
TCGACAACAACATCAGAAATGGTGCAATTACATTCTTCCATCCAGGTGGC
TCGGCATCCATGGGCAAGGTAGTGGATACTCAACTGCGGGTGAAGGGCGT
GAAGGGATTGCGTGTTGCGGATGCTAGTGTCCTGCCTGTACCTCTTGCGG
CGCATTATCAGGCTGTCCTTTATGCAGTGGCGGAGAAGGCAGCGGATCTA
CTCTTATACTAG
back to top

Coding sequence (CDS) from alignment at An11:1373855..1375516-

>CBS51388_006950-T1 ID=CBS51388_006950-T1|Name=CBS51388_006950-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1662bp|location=Sequence derived from alignment at An11:1373855..1375516- (Aspergillus niger CBS 513.88)
ATGCCTGACTCTTACGATTACATCATTGTCGGTGGAGGTCTGACGGGCTG
TGCTTTGGCTGGTCGGCTGGCTGAGAAAGACAAGTCATTACAAATCCTGA
TCATTGAAGCCGGACCCAACGTCGTCGATCATCCTCTCACCAGTACCCCG
TTGGCATGCTTTGGAGCTCATCACTCGCCTTTGGACTGGGACTACACCAC
GGTGCCACAGAAGCACCTCAACAGTCGTGAATGCTACAACGCGGCAGGGA
AGGCTCTGGGTGGAGGCACAGCGATAAACTACGGCACCTGGACCCGTGGT
AACGCTGCCGACTACAATCTCTGGGCAAAGCTGGTCGGGGATTTTAGCTG
GGGCTACAAAGGTCTACTTCCTTACTTCAAGCGTGTCGAGACGCATTACG
ATCGTAATGTCGACACGACAATTCACGGCACCAGGGGCCCCATCACCAAC
ACGATTGTCGCACTCACCAGCCCGGACCGAAAATATCCTCTGAAAGAGCC
AGTCCGCTCTGCATGGGAACGTATTGGCGTCAAGTTCAACCCAGATGCAA
ACGCTGGAAGCCCGCTGGGTCTAGCTCACTTTGGAGAGAACTGGCGTGAA
GGACAGCGTCAGCTTGCCAGTGAAGCATATGGATTGTCTCGGCGTCAAGG
AATATCCATTGTCACTGATACACTGGTGGCAAAGGTAATTCTCAAGGAGC
AAGATGGTCAACAGGTCGCGACAGGAGTCCAAGTAGTCAATGGAGAAGAA
TACCATGCCAGAAGAGAGGTGATCATTTCTGCTGGAACATACCGTACCCC
TCAGCTCCTCATGCTCTCTGGCATTGGGCCCGCAGAAGAGCTGGCAAAAC
ACAGCATCCCACAACTTGTGAACTCTCCAGAAGTGGGTCGAAACTTCCAT
GATCACATGTGTTTCCCCCAATGGTGGACACTGCGTCACCCCGAACAAGG
TCTCTCTATGGGGACGCCCCTTTGGGACAGTCCCGCGTATGGCATGGGGG
TACCTTATGATTGGAACGTGACGCTGCAGACGCCTACAGAGGAGTTGATC
AAAGCATTTCAAGCAGACGACGGGCAAATCCCGCCCAAGGACCATCCATA
CCTGGACACGGACTTTGCGCACTCCGAGGTTCTGGTTATATACGCACCGA
TGAGTCGCGCTGTGACTGGCTTTGAAACAGCCATGGATGGTACACACATA
AGCACGGCGGTTCTTTTGATGGCTCCGACAGCACGAGGCCAGATCACTCT
GGCCGATACAGATCCGGCCAGTGCACCTCTCATTGATCCCAACTACTGTT
CCAAGGAAGTGGACCGAGCCATTCTACGAGACGGGATTCGGAGAGTTGCC
AAGCTCATCCTGGACACGCCGGAGGGTCAAGACATGGTGGAGCACGAAGT
GACCAGACCCGGCAATGAACCTATGAGACTCGATTCCACTGACGAGGAAA
TCGACAACAACATCAGAAATGGTGCAATTACATTCTTCCATCCAGGTGGC
TCGGCATCCATGGGCAAGGTAGTGGATACTCAACTGCGGGTGAAGGGCGT
GAAGGGATTGCGTGTTGCGGATGCTAGTGTCCTGCCTGTACCTCTTGCGG
CGCATTATCAGGCTGTCCTTTATGCAGTGGCGGAGAAGGCAGCGGATCTA
CTCTTATACTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0016614oxidoreductase activity, acting on CH-OH group of donors
GO:0050660flavin adenine dinucleotide binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_006950CBS51388_006950Aspergillus niger CBS 513.88gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006950-T1.cdsCBS51388_006950-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006950-T1.exon1CBS51388_006950-T1.exon1Aspergillus niger CBS 513.88exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006950-T1CBS51388_006950-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_11.8
NoteCAZy:AA3_3
NoteCAZy:AA3
NoteCAZy:AA3_2
DBxrefInterPro:IPR007867
DBxrefInterPro:IPR036188
DBxrefInterPro:IPR012132
DBxrefInterPro:IPR000172
DBxrefPFAM:PF00732
DBxrefPFAM:PF05199
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An11supercontigAn11:1373855..1375516 -
Powered by Drupal