|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at An11:1384339..1385496+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_006953-T1 ID=CBS51388_006953-T1|Name=CBS51388_006953-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1158bp|location=Sequence derived from alignment at An11:1384339..1385496+ (Aspergillus niger CBS 513.88)
ATGTTCGGGGCTCTGAATCGGTTTATTGGCTTGGATGCCGAGCCTACCCG
GCAGGCGCGGGCTCAAAGCACCAGCGACAACTCGTTTGGATTCCAGGTCC
TTCGCAACAAGGATGCGGAGCTCCCTCTAGAGCCGTGGTTCGATTTCATT
GTCGGAATTAATGGGCGGTTAATAGTAAGACACTTCACTCTACAGGCAGA
TCTCTTGACATGCGCGAGTTCGGCTAACTAGCTACCAGGAGGATCCCGAC
CCCAACCTCTTCGCTACGGAAGTGCGCAACTGCGCCGGATCCAGCGTGAC
CTTTGAAGTCTGGAGCGCCAAGGTACAAACATAAACCAATACCCTCCGGT
TAAATCTACTAATACCGTTGTGAAGGGTCAAAAAACACACACCGTCTCCA
TCCCCGTCCCCGCATCCAACCCCGATCTGGGCCTGGCGCTCCAACTAGCC
CCCCTCTCCTCCACGCAAAACATCTGGCACGTCCTGTCGATCCCCTCTCC
GCTCAGTCCCGCCTACCGCGCAGGCCTCCTTCCACACTCCGACTACATTA
TCGGCACTCCAAGCGGGACATTACGTGGGGAATCGGCACTTGGCGAGCTT
GTCGAAGACCACCTGAACCGCACACTAGTCCTATGGGTATACAACAGCGA
GTTTGATGTGGTGCGCGAGGTCGAGCTGGTGCCTACACGGGGCTGGGGAG
GTGAGGGAGCTCTTGGCGCAGAATTGGGCTTTGGAGCACTACACCGGTTA
CCGGTCGGCCTGGGTGAGGAAGTAGAAGGTCCAGGAGAGGTGGTTTTTGA
GACGCGGGACGATGGCTCATCCGCGCCGGTAGTGGAAGCTCTGGGCCAGG
GACCCCCGCCGTCTGGGCATTTCCTGGTCCCGGCTAACATGACCTCTCCT
CCGCCGTTGTCGGGGCCACCGAGGAATTTGGCAGCGTCGCCAGCTAGTCA
TTCGTCTGCGGGTCGGCGGCATAAGACGCGTCATACAGGATCAGCTGCTG
CAGTGTCGTTTGATGACTACTTTGCGGAGGGCGAGCAGAAGAGCAAGGAA
CAAGACTTCGCGCCGTCTCGCAGGGGAACGCCGCTACCGCCTCCGCCCAA
GGCTGGGGTGCGGTCACCGCCTAGCTCGGGCAGTCCGGCGCCAGCGGCTG
CCGAATAG back to topCoding sequence (CDS) from alignment at An11:1384339..1385496+ >CBS51388_006953-T1 ID=CBS51388_006953-T1|Name=CBS51388_006953-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3123bp|location=Sequence derived from alignment at An11:1384339..1385496+ (Aspergillus niger CBS 513.88)
ATGTTCGGGGCTCTGAATCGGTTTATTGGCTTGGATGCCGAGCCTACCCG
GCAGGCGCGGGCTCAAAGCACCAGCGACAACTCGTTTGGATTCCAGGTCC
TTCGCAACAAGGATGCGGAGCTCCCTCTAGAGCCGTGGTTCGATTTCATT
GTCGGAATTAATGGGCGGTTAATAGAGGATCCCGACCCCAACCTCTTCGC
TACGGAAGTGCGCAACTGCGCCGGATCCAGCGTGACCTTTGAAGTCTGGA
GCGCCAAGGGTCAAAAAACACACACCGTCTCCATCCCCGTCCCCGCATCC
AACCCCGATCTGGGCCTGGCGCTCCAACTAGCCCCCCTCTCCTCCACGCA
AAACATCTGGCACGTCCTGTCGATCCCCTCTCCGCTCAGTCCCGCCTACC
GCGCAGGCCTCCTTCCACACTCCGACTACATTATCGGCACTCCAAGCGGG
ACATTACGTGGGGAATCGGCACTTGGCGAGCTTGTCGAAGACCACCTGAA
CCGCACACTAGTCCTATGGGTATACAACAGCGAGTTTGATGTGGTGCGCG
AGGTCGAGCTGGTGCCTACACGGGGCTGGGGAGGTGAGGGAGCTCTTGGC
GCAGAATTGGGCTTTGGAGCACTACACCGGTTACCGGTCGGCCTGGGTGA
GGAAGTAGAAGGTCCAGGAGAGGTGGTTTTTGAGACGCGGGACGATGGCT
CATCCGCGCCGGTAGTGGAAGCTCTGGGCCAGGGACCCCCGCCGTCTGGG
CATTTCCTGGTCCCGGCTAACATGACCTCTCCTCCGCCGTTGTCGGGGCC
ACCGAGGAATTTGGCAGCGTCGCCAGCTAGTCATTCGTCTGCGGGTCGGC
GGCATAAGACGCGTCATACAGGATCAGCTGCTGCAGTGTCGTTTGATGAC
TACTTTGCGGAGGGCGAGCAGAAGAGCAAGGAACAAGACTTCGCGCCGTC
TCGCAGGGGAACGCCGCTACCGCCTCCGCCCAAGGCTGGGGTGCGGTCAC
CGCCTAGCTCGGGCAGTCCGGCGCCAGCGGCTGCCGAATAGATGTTCGGG
GCTCTGAATCGGTTTATTGGCTTGGATGCCGAGCCTACCCGGCAGGCGCG
GGCTCAAAGCACCAGCGACAACTCGTTTGGATTCCAGGTCCTTCGCAACA
AGGATGCGGAGCTCCCTCTAGAGCCGTGGTTCGATTTCATTGTCGGAATT
AATGGGCGGTTAATAGAGGATCCCGACCCCAACCTCTTCGCTACGGAAGT
GCGCAACTGCGCCGGATCCAGCGTGACCTTTGAAGTCTGGAGCGCCAAGG
GTCAAAAAACACACACCGTCTCCATCCCCGTCCCCGCATCCAACCCCGAT
CTGGGCCTGGCGCTCCAACTAGCCCCCCTCTCCTCCACGCAAAACATCTG
GCACGTCCTGTCGATCCCCTCTCCGCTCAGTCCCGCCTACCGCGCAGGCC
TCCTTCCACACTCCGACTACATTATCGGCACTCCAAGCGGGACATTACGT
GGGGAATCGGCACTTGGCGAGCTTGTCGAAGACCACCTGAACCGCACACT
AGTCCTATGGGTATACAACAGCGAGTTTGATGTGGTGCGCGAGGTCGAGC
TGGTGCCTACACGGGGCTGGGGAGGTGAGGGAGCTCTTGGCGCAGAATTG
GGCTTTGGAGCACTACACCGGTTACCGGTCGGCCTGGGTGAGGAAGTAGA
AGGTCCAGGAGAGGTGGTTTTTGAGACGCGGGACGATGGCTCATCCGCGC
CGGTAGTGGAAGCTCTGGGCCAGGGACCCCCGCCGTCTGGGCATTTCCTG
GTCCCGGCTAACATGACCTCTCCTCCGCCGTTGTCGGGGCCACCGAGGAA
TTTGGCAGCGTCGCCAGCTAGTCATTCGTCTGCGGGTCGGCGGCATAAGA
CGCGTCATACAGGATCAGCTGCTGCAGTGTCGTTTGATGACTACTTTGCG
GAGGGCGAGCAGAAGAGCAAGGAACAAGACTTCGCGCCGTCTCGCAGGGG
AACGCCGCTACCGCCTCCGCCCAAGGCTGGGGTGCGGTCACCGCCTAGCT
CGGGCAGTCCGGCGCCAGCGGCTGCCGAATAGATGTTCGGGGCTCTGAAT
CGGTTTATTGGCTTGGATGCCGAGCCTACCCGGCAGGCGCGGGCTCAAAG
CACCAGCGACAACTCGTTTGGATTCCAGGTCCTTCGCAACAAGGATGCGG
AGCTCCCTCTAGAGCCGTGGTTCGATTTCATTGTCGGAATTAATGGGCGG
TTAATAGAGGATCCCGACCCCAACCTCTTCGCTACGGAAGTGCGCAACTG
CGCCGGATCCAGCGTGACCTTTGAAGTCTGGAGCGCCAAGGGTCAAAAAA
CACACACCGTCTCCATCCCCGTCCCCGCATCCAACCCCGATCTGGGCCTG
GCGCTCCAACTAGCCCCCCTCTCCTCCACGCAAAACATCTGGCACGTCCT
GTCGATCCCCTCTCCGCTCAGTCCCGCCTACCGCGCAGGCCTCCTTCCAC
ACTCCGACTACATTATCGGCACTCCAAGCGGGACATTACGTGGGGAATCG
GCACTTGGCGAGCTTGTCGAAGACCACCTGAACCGCACACTAGTCCTATG
GGTATACAACAGCGAGTTTGATGTGGTGCGCGAGGTCGAGCTGGTGCCTA
CACGGGGCTGGGGAGGTGAGGGAGCTCTTGGCGCAGAATTGGGCTTTGGA
GCACTACACCGGTTACCGGTCGGCCTGGGTGAGGAAGTAGAAGGTCCAGG
AGAGGTGGTTTTTGAGACGCGGGACGATGGCTCATCCGCGCCGGTAGTGG
AAGCTCTGGGCCAGGGACCCCCGCCGTCTGGGCATTTCCTGGTCCCGGCT
AACATGACCTCTCCTCCGCCGTTGTCGGGGCCACCGAGGAATTTGGCAGC
GTCGCCAGCTAGTCATTCGTCTGCGGGTCGGCGGCATAAGACGCGTCATA
CAGGATCAGCTGCTGCAGTGTCGTTTGATGACTACTTTGCGGAGGGCGAG
CAGAAGAGCAAGGAACAAGACTTCGCGCCGTCTCGCAGGGGAACGCCGCT
ACCGCCTCCGCCCAAGGCTGGGGTGCGGTCACCGCCTAGCTCGGGCAGTC
CGGCGCCAGCGGCTGCCGAATAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_11.8 |
| Note | BUSCO:EOG09262V9N |
| DBxref | InterPro:IPR024958 |
| DBxref | InterPro:IPR036034 |
| DBxref | PFAM:PF04495 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An11 | supercontig | An11:1384339..1385496 + |
|
