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Sequences
The following sequences are available for this feature:
mRNA from alignment at An11:1429554..1431225- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_006972-T1 ID=CBS51388_006972-T1|Name=CBS51388_006972-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1672bp|location=Sequence derived from alignment at An11:1429554..1431225- (Aspergillus niger CBS 513.88) ATGTTGGAGGTTTCACATGTAGCGAGACACAGAACAGATGCTTTGCCGGC
TGATGCATACAAACTCTTTCTCTTCTTTCTCATAAGACAGAATTCAATAA
TGACCTTGACGGTGTCGACATTGACTGGGAATATCCAGGGGCACCTGACC
TCCCTGAAAACGACCCTGGCACGGAGGAAGACGGACCCAACTACCTGGCA
TTTCTTGTCGGTCTCAAAAACCTCCTGCCGGGAAAGTCTGTCTCCATTGC
AGCACCGGCATCCTACTGGTACTTGAAGCAGTTCCCCATTAAAGATATGG
CCAAAATCGTGGACTACATTGTCTATATGACTTATGATCTTCACGGACAG
TGGGATGCGTATAACAGCAACTCACAGAAAGGCTGTGCTACGGGTAATTG
TCTGCGCAGCCAAGTTAATCTGACGCAAACAAAACAGTCCTTGGCAATGA
TTACCAAATCAGGTGTCCCTGGCGCAAAGGTCATTGTCGGTGTGACAAGC
TATGGTCGTTCCTTCAAGATGGCAGACCCAAATTGCTCGGGGACGGATTG
TCTTTACACTTGCGACCGCTTACATTCTGACGCAAAAAAGGGCGAATGCA
CCAATACTGCTGGGTACCTTGCAGGTGCGGAAATTGACGATATCATGAAA
GATTCCTCTCGGGTCGTCAAAAGCTATGTCGACACGACCAGCAATAGCGA
CATTCTTGTTTTTATGATAACGATGAGTGGGTCAGCTACACGAGCGCCGC
AACAAAAAGGACGCGCACCACTCTGTATAGTGCCTGGGGCTTGGGGGGAA
CCTCTGACTGGGCCAGCGACCTGCAAACCTATCATGATGTTCCCAACCCG
GCAAAAAGCTGGGCCAACTTCATCCAGCTCGCCAAAGCAGGGGAGGACCC
GAAGACAGACCAGACGCGTAACGGAAACTGGACCTCGTATAATTGCGCTG
ACGATAATGTGGCAAATCTGTTTGATTTCACACCCTCACAACGTTGGAAG
AATATGGACACTGATACGGCATGGGGTGACATTATCCGAATTTGGAATGA
CACCGATAGTCCACGGCATACTACTTTCATGGAATCTGTTGTAAGTACCA
CCCACTTTAAGGGTCAGGCTTGCGATGAAATGGAGTCAGGGAGCTGCAGT
TCCATTGGTTGCGAAGACGGTGCAAATGGCAACCACTCTGGGCCCGCAGC
CTTTTTCATATTGTACTCGATGGCCGAAATTCATAAGATGTACAAGAAAT
ACTACGACGGCTTATTCATGTCTCTCAGTATTGTCGGTACGGCACTCGAC
GATATGGAGAACAAATTTGCGCCTATCCCGCCTGAAGAAGACGATACCTG
GCTCAATATTCTCATCGACATGATCACACTTGGCTCCCTAGGAACTGCCG
GGCCGTTGTTCAACACGATGTTGAAGGACCATGATTGGTTTGCAGGGAAG
ACTGGCAGTGCCCTGGACAACGCAAAGGATACCACTATGACCCTCGTAGG
ACAAGGTACAACTACCGCCAAGGATTTACTATCTCCGGGTAACGAAGGGG
AATGGACACCTGAAAAACAGGATGAATTCTCAGCCTATATGGGGCAGGTC
GTGTATGGCTGGTCCAATGTCACCTCCCGCGCGCTTTTTGAAGTAAGCGT
CTTGATCTACACACAATGTTAG back to topCoding sequence (CDS) from alignment at An11:1429554..1431225- >CBS51388_006972-T1 ID=CBS51388_006972-T1|Name=CBS51388_006972-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4635bp|location=Sequence derived from alignment at An11:1429554..1431225- (Aspergillus niger CBS 513.88) TGCCTGGGGCTTGGGGGGAACCTCTGACTGGGCCAGCGACCTGCAAACCT ATCATGATGTTCCCAACCCGGCAAAAAGCTGGGCCAACTTCATCCAGCTC GCCAAAGCAGGGGAGGACCCGAAGACAGACCAGACGCGTAACGGAAACTG GACCTCGTATAATTGCGCTGACGATAATGTGGCAAATCTGTTTGATTTCA CACCCTCACAACGTTGGAAGAATATGGACACTGATACGGCATGGGGTGAC ATTATCCGAATTTGGAATGACACCGATAGTCCACGGCATACTACTTTCAT GGAATCTGTTGTAAGTACCACCCACTTTAAGGGTCAGGCTTGCGATGAAA TGGAGTCAGGGAGCTGCAGTTCCATTGGTTGCGAAGACGGTGCAAATGGC AACCACTCTGGGCCCGCAGCCTTTTTCATATTGTACTCGATGGCCGAAAT TCATAAGATGTACAAGAAATACTACGACGGCTTATTCATGTCTCTCAGTA TTGTCGGTACGGCACTCGACGATATGGAGAACAAATTTGCGCCTATCCCG CCTGAAGAAGACGATACCTGGCTCAATATTCTCATCGACATGATCACACT TGGCTCCCTAGGAACTGCCGGGCCGTTGTTCAACACGATGTTGAAGGACC ATGATTGGTTTGCAGGGAAGACTGGCAGTGCCCTGGACAACGCAAAGGAT ACCACTATGACCCTCGTAGGACAAGGTACAACTACCGCCAAGGATTTACT ATCTCCGGGTAACGAAGGGGAATGGACACCTGAAAAACAGGATGAATTCT CAGCCTATATGGGGCAGGTCGTGTATGGCTGGTCCAATGTCACCTCCCGC GCGCTTTTTGAAGTAAGCGTCTTGATCTACACACAATGTTAGACAGAATT CAATAATGACCTTGACGGTGTCGACATTGACTGGGAATATCCAGGGGCAC CTGACCTCCCTGAAAACGACCCTGGCACGGAGGAAGACGGACCCAACTAC CTGGCATTTCTTGTCGGTCTCAAAAACCTCCTGCCGGGAAAGTCTGTCTC CATTGCAGCACCGGCATCCTACTGGTACTTGAAGCAGTTCCCCATTAAAG ATATGGCCAAAATCGTGGACTACATTGTCTATATGACTTATGATCTTCAC GGACAGTGGGATGCGTATAACAGCAACTCACAGAAAGGCTGTGCTACGGG TAATTGTCTGCGCAGCCAAGTTAATCTGACGCAAACAAAACAGTCCTTGG CAATGATTACCAAATCAGGTGTCCCTGGCGCAAAGGTCATTGTCGGTGTG ACAAGCTATGGTCGTTCCTTCAAGATGGCAGACCCAAATTGCTCGGGGAC GGATTGTCTTTACACTTGCGACCGCTTACATTCTGACGCAAAAAAGGGCG AATGCACCAATACTGCTGGGTACCTTGCAGGTGCGGAAATTGACGATATC ATGAAAGATTCCTCTCGGGTCGTCAAAAGCTATGTCGACACGACCAGCAA TAGCGACATTCTTGTTTTTATGATAACGATGAGTGGATGTTGGAGTGCCT GGGGCTTGGGGGGAACCTCTGACTGGGCCAGCGACCTGCAAACCTATCAT GATGTTCCCAACCCGGCAAAAAGCTGGGCCAACTTCATCCAGCTCGCCAA AGCAGGGGAGGACCCGAAGACAGACCAGACGCGTAACGGAAACTGGACCT CGTATAATTGCGCTGACGATAATGTGGCAAATCTGTTTGATTTCACACCC TCACAACGTTGGAAGAATATGGACACTGATACGGCATGGGGTGACATTAT CCGAATTTGGAATGACACCGATAGTCCACGGCATACTACTTTCATGGAAT CTGTTGTAAGTACCACCCACTTTAAGGGTCAGGCTTGCGATGAAATGGAG TCAGGGAGCTGCAGTTCCATTGGTTGCGAAGACGGTGCAAATGGCAACCA CTCTGGGCCCGCAGCCTTTTTCATATTGTACTCGATGGCCGAAATTCATA AGATGTACAAGAAATACTACGACGGCTTATTCATGTCTCTCAGTATTGTC GGTACGGCACTCGACGATATGGAGAACAAATTTGCGCCTATCCCGCCTGA AGAAGACGATACCTGGCTCAATATTCTCATCGACATGATCACACTTGGCT CCCTAGGAACTGCCGGGCCGTTGTTCAACACGATGTTGAAGGACCATGAT TGGTTTGCAGGGAAGACTGGCAGTGCCCTGGACAACGCAAAGGATACCAC TATGACCCTCGTAGGACAAGGTACAACTACCGCCAAGGATTTACTATCTC CGGGTAACGAAGGGGAATGGACACCTGAAAAACAGGATGAATTCTCAGCC TATATGGGGCAGGTCGTGTATGGCTGGTCCAATGTCACCTCCCGCGCGCT TTTTGAAGTAAGCGTCTTGATCTACACACAATGTTAGACAGAATTCAATA ATGACCTTGACGGTGTCGACATTGACTGGGAATATCCAGGGGCACCTGAC CTCCCTGAAAACGACCCTGGCACGGAGGAAGACGGACCCAACTACCTGGC ATTTCTTGTCGGTCTCAAAAACCTCCTGCCGGGAAAGTCTGTCTCCATTG CAGCACCGGCATCCTACTGGTACTTGAAGCAGTTCCCCATTAAAGATATG GCCAAAATCGTGGACTACATTGTCTATATGACTTATGATCTTCACGGACA GTGGGATGCGTATAACAGCAACTCACAGAAAGGCTGTGCTACGGGTAATT GTCTGCGCAGCCAAGTTAATCTGACGCAAACAAAACAGTCCTTGGCAATG ATTACCAAATCAGGTGTCCCTGGCGCAAAGGTCATTGTCGGTGTGACAAG CTATGGTCGTTCCTTCAAGATGGCAGACCCAAATTGCTCGGGGACGGATT GTCTTTACACTTGCGACCGCTTACATTCTGACGCAAAAAAGGGCGAATGC ACCAATACTGCTGGGTACCTTGCAGGTGCGGAAATTGACGATATCATGAA AGATTCCTCTCGGGTCGTCAAAAGCTATGTCGACACGACCAGCAATAGCG ACATTCTTGTTTTTATGATAACGATGAGTGGATGTTGGAGTGCCTGGGGC TTGGGGGGAACCTCTGACTGGGCCAGCGACCTGCAAACCTATCATGATGT TCCCAACCCGGCAAAAAGCTGGGCCAACTTCATCCAGCTCGCCAAAGCAG GGGAGGACCCGAAGACAGACCAGACGCGTAACGGAAACTGGACCTCGTAT AATTGCGCTGACGATAATGTGGCAAATCTGTTTGATTTCACACCCTCACA ACGTTGGAAGAATATGGACACTGATACGGCATGGGGTGACATTATCCGAA TTTGGAATGACACCGATAGTCCACGGCATACTACTTTCATGGAATCTGTT GTAAGTACCACCCACTTTAAGGGTCAGGCTTGCGATGAAATGGAGTCAGG GAGCTGCAGTTCCATTGGTTGCGAAGACGGTGCAAATGGCAACCACTCTG GGCCCGCAGCCTTTTTCATATTGTACTCGATGGCCGAAATTCATAAGATG TACAAGAAATACTACGACGGCTTATTCATGTCTCTCAGTATTGTCGGTAC GGCACTCGACGATATGGAGAACAAATTTGCGCCTATCCCGCCTGAAGAAG ACGATACCTGGCTCAATATTCTCATCGACATGATCACACTTGGCTCCCTA GGAACTGCCGGGCCGTTGTTCAACACGATGTTGAAGGACCATGATTGGTT TGCAGGGAAGACTGGCAGTGCCCTGGACAACGCAAAGGATACCACTATGA CCCTCGTAGGACAAGGTACAACTACCGCCAAGGATTTACTATCTCCGGGT AACGAAGGGGAATGGACACCTGAAAAACAGGATGAATTCTCAGCCTATAT GGGGCAGGTCGTGTATGGCTGGTCCAATGTCACCTCCCGCGCGCTTTTTG AAGTAAGCGTCTTGATCTACACACAATGTTAGACAGAATTCAATAATGAC CTTGACGGTGTCGACATTGACTGGGAATATCCAGGGGCACCTGACCTCCC TGAAAACGACCCTGGCACGGAGGAAGACGGACCCAACTACCTGGCATTTC TTGTCGGTCTCAAAAACCTCCTGCCGGGAAAGTCTGTCTCCATTGCAGCA CCGGCATCCTACTGGTACTTGAAGCAGTTCCCCATTAAAGATATGGCCAA AATCGTGGACTACATTGTCTATATGACTTATGATCTTCACGGACAGTGGG ATGCGTATAACAGCAACTCACAGAAAGGCTGTGCTACGGGTAATTGTCTG CGCAGCCAAGTTAATCTGACGCAAACAAAACAGTCCTTGGCAATGATTAC CAAATCAGGTGTCCCTGGCGCAAAGGTCATTGTCGGTGTGACAAGCTATG GTCGTTCCTTCAAGATGGCAGACCCAAATTGCTCGGGGACGGATTGTCTT TACACTTGCGACCGCTTACATTCTGACGCAAAAAAGGGCGAATGCACCAA TACTGCTGGGTACCTTGCAGGTGCGGAAATTGACGATATCATGAAAGATT CCTCTCGGGTCGTCAAAAGCTATGTCGACACGACCAGCAATAGCGACATT CTTGTTTTTATGATAACGATGAGTGGATGTTGGAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
Term | Definition |
GO:0005975 | carbohydrate metabolic process |
Vocabulary: Molecular Function
Term | Definition |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0008061 | chitin binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
Property Name | Value |
Note | CAZy:GH18 |
DBxref | InterPro:IPR017853 |
DBxref | InterPro:IPR001579 |
DBxref | InterPro:IPR001223 |
DBxref | InterPro:IPR029070 |
DBxref | InterPro:IPR011583 |
DBxref | PFAM:PF00704 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
An11 | supercontig | An11:1429554..1431225 - |
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