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CBS51388_006972-T1, CBS51388_006972-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_006972-T1
Unique NameCBS51388_006972-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An11:1429554..1431225-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_006972-T1 ID=CBS51388_006972-T1|Name=CBS51388_006972-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1672bp|location=Sequence derived from alignment at An11:1429554..1431225- (Aspergillus niger CBS 513.88)
ATGTTGGAGGTTTCACATGTAGCGAGACACAGAACAGATGCTTTGCCGGC
TGATGCATACAAACTCTTTCTCTTCTTTCTCATAAGACAGAATTCAATAA
TGACCTTGACGGTGTCGACATTGACTGGGAATATCCAGGGGCACCTGACC
TCCCTGAAAACGACCCTGGCACGGAGGAAGACGGACCCAACTACCTGGCA
TTTCTTGTCGGTCTCAAAAACCTCCTGCCGGGAAAGTCTGTCTCCATTGC
AGCACCGGCATCCTACTGGTACTTGAAGCAGTTCCCCATTAAAGATATGG
CCAAAATCGTGGACTACATTGTCTATATGACTTATGATCTTCACGGACAG
TGGGATGCGTATAACAGCAACTCACAGAAAGGCTGTGCTACGGGTAATTG
TCTGCGCAGCCAAGTTAATCTGACGCAAACAAAACAGTCCTTGGCAATGA
TTACCAAATCAGGTGTCCCTGGCGCAAAGGTCATTGTCGGTGTGACAAGC
TATGGTCGTTCCTTCAAGATGGCAGACCCAAATTGCTCGGGGACGGATTG
TCTTTACACTTGCGACCGCTTACATTCTGACGCAAAAAAGGGCGAATGCA
CCAATACTGCTGGGTACCTTGCAGGTGCGGAAATTGACGATATCATGAAA
GATTCCTCTCGGGTCGTCAAAAGCTATGTCGACACGACCAGCAATAGCGA
CATTCTTGTTTTTATGATAACGATGAGTGGGTCAGCTACACGAGCGCCGC
AACAAAAAGGACGCGCACCACTCTGTATAGTGCCTGGGGCTTGGGGGGAA
CCTCTGACTGGGCCAGCGACCTGCAAACCTATCATGATGTTCCCAACCCG
GCAAAAAGCTGGGCCAACTTCATCCAGCTCGCCAAAGCAGGGGAGGACCC
GAAGACAGACCAGACGCGTAACGGAAACTGGACCTCGTATAATTGCGCTG
ACGATAATGTGGCAAATCTGTTTGATTTCACACCCTCACAACGTTGGAAG
AATATGGACACTGATACGGCATGGGGTGACATTATCCGAATTTGGAATGA
CACCGATAGTCCACGGCATACTACTTTCATGGAATCTGTTGTAAGTACCA
CCCACTTTAAGGGTCAGGCTTGCGATGAAATGGAGTCAGGGAGCTGCAGT
TCCATTGGTTGCGAAGACGGTGCAAATGGCAACCACTCTGGGCCCGCAGC
CTTTTTCATATTGTACTCGATGGCCGAAATTCATAAGATGTACAAGAAAT
ACTACGACGGCTTATTCATGTCTCTCAGTATTGTCGGTACGGCACTCGAC
GATATGGAGAACAAATTTGCGCCTATCCCGCCTGAAGAAGACGATACCTG
GCTCAATATTCTCATCGACATGATCACACTTGGCTCCCTAGGAACTGCCG
GGCCGTTGTTCAACACGATGTTGAAGGACCATGATTGGTTTGCAGGGAAG
ACTGGCAGTGCCCTGGACAACGCAAAGGATACCACTATGACCCTCGTAGG
ACAAGGTACAACTACCGCCAAGGATTTACTATCTCCGGGTAACGAAGGGG
AATGGACACCTGAAAAACAGGATGAATTCTCAGCCTATATGGGGCAGGTC
GTGTATGGCTGGTCCAATGTCACCTCCCGCGCGCTTTTTGAAGTAAGCGT
CTTGATCTACACACAATGTTAG
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Coding sequence (CDS) from alignment at An11:1429554..1431225-

>CBS51388_006972-T1 ID=CBS51388_006972-T1|Name=CBS51388_006972-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4635bp|location=Sequence derived from alignment at An11:1429554..1431225- (Aspergillus niger CBS 513.88)
TGCCTGGGGCTTGGGGGGAACCTCTGACTGGGCCAGCGACCTGCAAACCT
ATCATGATGTTCCCAACCCGGCAAAAAGCTGGGCCAACTTCATCCAGCTC
GCCAAAGCAGGGGAGGACCCGAAGACAGACCAGACGCGTAACGGAAACTG
GACCTCGTATAATTGCGCTGACGATAATGTGGCAAATCTGTTTGATTTCA
CACCCTCACAACGTTGGAAGAATATGGACACTGATACGGCATGGGGTGAC
ATTATCCGAATTTGGAATGACACCGATAGTCCACGGCATACTACTTTCAT
GGAATCTGTTGTAAGTACCACCCACTTTAAGGGTCAGGCTTGCGATGAAA
TGGAGTCAGGGAGCTGCAGTTCCATTGGTTGCGAAGACGGTGCAAATGGC
AACCACTCTGGGCCCGCAGCCTTTTTCATATTGTACTCGATGGCCGAAAT
TCATAAGATGTACAAGAAATACTACGACGGCTTATTCATGTCTCTCAGTA
TTGTCGGTACGGCACTCGACGATATGGAGAACAAATTTGCGCCTATCCCG
CCTGAAGAAGACGATACCTGGCTCAATATTCTCATCGACATGATCACACT
TGGCTCCCTAGGAACTGCCGGGCCGTTGTTCAACACGATGTTGAAGGACC
ATGATTGGTTTGCAGGGAAGACTGGCAGTGCCCTGGACAACGCAAAGGAT
ACCACTATGACCCTCGTAGGACAAGGTACAACTACCGCCAAGGATTTACT
ATCTCCGGGTAACGAAGGGGAATGGACACCTGAAAAACAGGATGAATTCT
CAGCCTATATGGGGCAGGTCGTGTATGGCTGGTCCAATGTCACCTCCCGC
GCGCTTTTTGAAGTAAGCGTCTTGATCTACACACAATGTTAGACAGAATT
CAATAATGACCTTGACGGTGTCGACATTGACTGGGAATATCCAGGGGCAC
CTGACCTCCCTGAAAACGACCCTGGCACGGAGGAAGACGGACCCAACTAC
CTGGCATTTCTTGTCGGTCTCAAAAACCTCCTGCCGGGAAAGTCTGTCTC
CATTGCAGCACCGGCATCCTACTGGTACTTGAAGCAGTTCCCCATTAAAG
ATATGGCCAAAATCGTGGACTACATTGTCTATATGACTTATGATCTTCAC
GGACAGTGGGATGCGTATAACAGCAACTCACAGAAAGGCTGTGCTACGGG
TAATTGTCTGCGCAGCCAAGTTAATCTGACGCAAACAAAACAGTCCTTGG
CAATGATTACCAAATCAGGTGTCCCTGGCGCAAAGGTCATTGTCGGTGTG
ACAAGCTATGGTCGTTCCTTCAAGATGGCAGACCCAAATTGCTCGGGGAC
GGATTGTCTTTACACTTGCGACCGCTTACATTCTGACGCAAAAAAGGGCG
AATGCACCAATACTGCTGGGTACCTTGCAGGTGCGGAAATTGACGATATC
ATGAAAGATTCCTCTCGGGTCGTCAAAAGCTATGTCGACACGACCAGCAA
TAGCGACATTCTTGTTTTTATGATAACGATGAGTGGATGTTGGAGTGCCT
GGGGCTTGGGGGGAACCTCTGACTGGGCCAGCGACCTGCAAACCTATCAT
GATGTTCCCAACCCGGCAAAAAGCTGGGCCAACTTCATCCAGCTCGCCAA
AGCAGGGGAGGACCCGAAGACAGACCAGACGCGTAACGGAAACTGGACCT
CGTATAATTGCGCTGACGATAATGTGGCAAATCTGTTTGATTTCACACCC
TCACAACGTTGGAAGAATATGGACACTGATACGGCATGGGGTGACATTAT
CCGAATTTGGAATGACACCGATAGTCCACGGCATACTACTTTCATGGAAT
CTGTTGTAAGTACCACCCACTTTAAGGGTCAGGCTTGCGATGAAATGGAG
TCAGGGAGCTGCAGTTCCATTGGTTGCGAAGACGGTGCAAATGGCAACCA
CTCTGGGCCCGCAGCCTTTTTCATATTGTACTCGATGGCCGAAATTCATA
AGATGTACAAGAAATACTACGACGGCTTATTCATGTCTCTCAGTATTGTC
GGTACGGCACTCGACGATATGGAGAACAAATTTGCGCCTATCCCGCCTGA
AGAAGACGATACCTGGCTCAATATTCTCATCGACATGATCACACTTGGCT
CCCTAGGAACTGCCGGGCCGTTGTTCAACACGATGTTGAAGGACCATGAT
TGGTTTGCAGGGAAGACTGGCAGTGCCCTGGACAACGCAAAGGATACCAC
TATGACCCTCGTAGGACAAGGTACAACTACCGCCAAGGATTTACTATCTC
CGGGTAACGAAGGGGAATGGACACCTGAAAAACAGGATGAATTCTCAGCC
TATATGGGGCAGGTCGTGTATGGCTGGTCCAATGTCACCTCCCGCGCGCT
TTTTGAAGTAAGCGTCTTGATCTACACACAATGTTAGACAGAATTCAATA
ATGACCTTGACGGTGTCGACATTGACTGGGAATATCCAGGGGCACCTGAC
CTCCCTGAAAACGACCCTGGCACGGAGGAAGACGGACCCAACTACCTGGC
ATTTCTTGTCGGTCTCAAAAACCTCCTGCCGGGAAAGTCTGTCTCCATTG
CAGCACCGGCATCCTACTGGTACTTGAAGCAGTTCCCCATTAAAGATATG
GCCAAAATCGTGGACTACATTGTCTATATGACTTATGATCTTCACGGACA
GTGGGATGCGTATAACAGCAACTCACAGAAAGGCTGTGCTACGGGTAATT
GTCTGCGCAGCCAAGTTAATCTGACGCAAACAAAACAGTCCTTGGCAATG
ATTACCAAATCAGGTGTCCCTGGCGCAAAGGTCATTGTCGGTGTGACAAG
CTATGGTCGTTCCTTCAAGATGGCAGACCCAAATTGCTCGGGGACGGATT
GTCTTTACACTTGCGACCGCTTACATTCTGACGCAAAAAAGGGCGAATGC
ACCAATACTGCTGGGTACCTTGCAGGTGCGGAAATTGACGATATCATGAA
AGATTCCTCTCGGGTCGTCAAAAGCTATGTCGACACGACCAGCAATAGCG
ACATTCTTGTTTTTATGATAACGATGAGTGGATGTTGGAGTGCCTGGGGC
TTGGGGGGAACCTCTGACTGGGCCAGCGACCTGCAAACCTATCATGATGT
TCCCAACCCGGCAAAAAGCTGGGCCAACTTCATCCAGCTCGCCAAAGCAG
GGGAGGACCCGAAGACAGACCAGACGCGTAACGGAAACTGGACCTCGTAT
AATTGCGCTGACGATAATGTGGCAAATCTGTTTGATTTCACACCCTCACA
ACGTTGGAAGAATATGGACACTGATACGGCATGGGGTGACATTATCCGAA
TTTGGAATGACACCGATAGTCCACGGCATACTACTTTCATGGAATCTGTT
GTAAGTACCACCCACTTTAAGGGTCAGGCTTGCGATGAAATGGAGTCAGG
GAGCTGCAGTTCCATTGGTTGCGAAGACGGTGCAAATGGCAACCACTCTG
GGCCCGCAGCCTTTTTCATATTGTACTCGATGGCCGAAATTCATAAGATG
TACAAGAAATACTACGACGGCTTATTCATGTCTCTCAGTATTGTCGGTAC
GGCACTCGACGATATGGAGAACAAATTTGCGCCTATCCCGCCTGAAGAAG
ACGATACCTGGCTCAATATTCTCATCGACATGATCACACTTGGCTCCCTA
GGAACTGCCGGGCCGTTGTTCAACACGATGTTGAAGGACCATGATTGGTT
TGCAGGGAAGACTGGCAGTGCCCTGGACAACGCAAAGGATACCACTATGA
CCCTCGTAGGACAAGGTACAACTACCGCCAAGGATTTACTATCTCCGGGT
AACGAAGGGGAATGGACACCTGAAAAACAGGATGAATTCTCAGCCTATAT
GGGGCAGGTCGTGTATGGCTGGTCCAATGTCACCTCCCGCGCGCTTTTTG
AAGTAAGCGTCTTGATCTACACACAATGTTAGACAGAATTCAATAATGAC
CTTGACGGTGTCGACATTGACTGGGAATATCCAGGGGCACCTGACCTCCC
TGAAAACGACCCTGGCACGGAGGAAGACGGACCCAACTACCTGGCATTTC
TTGTCGGTCTCAAAAACCTCCTGCCGGGAAAGTCTGTCTCCATTGCAGCA
CCGGCATCCTACTGGTACTTGAAGCAGTTCCCCATTAAAGATATGGCCAA
AATCGTGGACTACATTGTCTATATGACTTATGATCTTCACGGACAGTGGG
ATGCGTATAACAGCAACTCACAGAAAGGCTGTGCTACGGGTAATTGTCTG
CGCAGCCAAGTTAATCTGACGCAAACAAAACAGTCCTTGGCAATGATTAC
CAAATCAGGTGTCCCTGGCGCAAAGGTCATTGTCGGTGTGACAAGCTATG
GTCGTTCCTTCAAGATGGCAGACCCAAATTGCTCGGGGACGGATTGTCTT
TACACTTGCGACCGCTTACATTCTGACGCAAAAAAGGGCGAATGCACCAA
TACTGCTGGGTACCTTGCAGGTGCGGAAATTGACGATATCATGAAAGATT
CCTCTCGGGTCGTCAAAAGCTATGTCGACACGACCAGCAATAGCGACATT
CTTGTTTTTATGATAACGATGAGTGGATGTTGGAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0008061chitin binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_006972CBS51388_006972Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006972-T1CBS51388_006972-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006972-T1.cdsCBS51388_006972-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006972-T1.exon3CBS51388_006972-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_006972-T1.exon2CBS51388_006972-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_006972-T1.exon1CBS51388_006972-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
NoteCAZy:GH18
DBxrefInterPro:IPR017853
DBxrefInterPro:IPR001579
DBxrefInterPro:IPR001223
DBxrefInterPro:IPR029070
DBxrefInterPro:IPR011583
DBxrefPFAM:PF00704
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An11supercontigAn11:1429554..1431225 -
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