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Sequences
The following sequences are available for this feature:
mRNA from alignment at An11:1473108..1474550- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_006983-T1 ID=CBS51388_006983-T1|Name=CBS51388_006983-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1443bp|location=Sequence derived from alignment at An11:1473108..1474550- (Aspergillus niger CBS 513.88)
ATGGCGTCCCTGGCCAACCTCCCTTTGGAACTTTTACGCTGGGTGGCTGA
ATACCTAACTACTCAACGCGATATCAGTCATCTTATGCAGACGACTAAGC
GCCTCTATCACACAATACACCCTCTTCTCTGCGAATACAATATTCAACAT
GATGACAGCTCCGCGCTGGTCTGGGCTGCCCAAAAGGGAAACGCTCTCTT
GGTTGACAAACTCCTCGCCGCGGGCGCCAATATCGCCGCCTACGTTCCTC
CTGCCCGGTATATAGTGAGGAAGATTAGGAGGGGTACAGGTGCTGATCCT
TGGGCTAAGAACAATCCTTTGTTGTATGCGGCTCAAGGAGGACACATGGA
GGTTCTGGGAATTCTGCTGGCTGAAACCTGTTCGGGCCACGCAGCGTCAT
CAGCACAGTTACGGTCGGTCCTGCATTGGGCGCTGCGCCAGCACGATGGC
CAGTTGGTCGAGCGAATGCTCGCCCACAAAGCACCCTTGGATCCCGCAAC
AGAGGCAAGATGCGCTCCTTCAGCGCTGGGTGTGGCCGTCGCCGCTGGCT
ATAAGTCTATTCTCCCTCGGCTACTGGATATTGGGGCACGGCCAGGGCTC
CGAGAGTGCCCCTGCCCAACCGAGCAGGCTGTCTGCAATAACCGGCCTGA
CATTTTGCGGATACTCCTGGATCATGGTATCGGTCTTTACGGTGATGACG
CATTGTGCCACATTGCCCATAACGATGACCGCAGCATGCTTCAGCTCTTC
CTGGAGTATGACATTGACCTCGTAGAATACGGTTCCGCAGCCTTGTTCAC
TGCGATTCGGGACGGTCATTACGAAATGGCAGAACTGCTGATTGACAATG
GCGCACTCAAAGATGTATCTTGTGATCTCTATCCCCCGTCTGGCTTGTTT
CCCGGTACTCCGTACAGTGCCGTCGGCTTCGCTATATTATATGAGCGAGT
GGACATCCTGAGGCTTCTCCTTGAAAAAGGGTTTCTCCCCGCCCCTTCAG
ACTTAGACCTCGCTAAAGAAAGAAATTTCGATGAGGCCGTGTCACTTTTG
GCTCCATTTGCGAAACGCGAGTTACACTATCATCTGGGTATCGCAAACTG
GCATGCTTTCGGGTTGAACCCCAAATCGACGGAGGAGCGGGCTTCAAACA
GGTGGCACAGTAAATATTGTGCTGGGGGAATAGCCGACACATCTGGGACC
AGGGAACCAGAGCCAGATCTAGGTCTCTATCTTCCACCTGGGCCGGTTGA
TTCAGACGGTGACCCCATCTCGGAGTCCGAAGATAGCCGTAACCGGAGGG
ATCATTTCACAGTGTGTTATTAGTATGTAGATGTAGTTCGGCTGCTTACA
GTTAAAAAATGGAAACAACTGACTAAACTTTGAAAGCAAACCATCGGATC
CCAGAAGGGGACTATGATGGCACTCATCACAAAGGTCGGCTAG back to topCoding sequence (CDS) from alignment at An11:1473108..1474550- >CBS51388_006983-T1 ID=CBS51388_006983-T1|Name=CBS51388_006983-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2736bp|location=Sequence derived from alignment at An11:1473108..1474550- (Aspergillus niger CBS 513.88)
CAAACCATCGGATCCCAGAAGGGGACTATGATGGCACTCATCACAAAGGT
CGGCTAGATGGCGTCCCTGGCCAACCTCCCTTTGGAACTTTTACGCTGGG
TGGCTGAATACCTAACTACTCAACGCGATATCAGTCATCTTATGCAGACG
ACTAAGCGCCTCTATCACACAATACACCCTCTTCTCTGCGAATACAATAT
TCAACATGATGACAGCTCCGCGCTGGTCTGGGCTGCCCAAAAGGGAAACG
CTCTCTTGGTTGACAAACTCCTCGCCGCGGGCGCCAATATCGCCGCCTAC
GTTCCTCCTGCCCGGTATATAGTGAGGAAGATTAGGAGGGGTACAGGTGC
TGATCCTTGGGCTAAGAACAATCCTTTGTTGTATGCGGCTCAAGGAGGAC
ACATGGAGGTTCTGGGAATTCTGCTGGCTGAAACCTGTTCGGGCCACGCA
GCGTCATCAGCACAGTTACGGTCGGTCCTGCATTGGGCGCTGCGCCAGCA
CGATGGCCAGTTGGTCGAGCGAATGCTCGCCCACAAAGCACCCTTGGATC
CCGCAACAGAGGCAAGATGCGCTCCTTCAGCGCTGGGTGTGGCCGTCGCC
GCTGGCTATAAGTCTATTCTCCCTCGGCTACTGGATATTGGGGCACGGCC
AGGGCTCCGAGAGTGCCCCTGCCCAACCGAGCAGGCTGTCTGCAATAACC
GGCCTGACATTTTGCGGATACTCCTGGATCATGGTATCGGTCTTTACGGT
GATGACGCATTGTGCCACATTGCCCATAACGATGACCGCAGCATGCTTCA
GCTCTTCCTGGAGTATGACATTGACCTCGTAGAATACGGTTCCGCAGCCT
TGTTCACTGCGATTCGGGACGGTCATTACGAAATGGCAGAACTGCTGATT
GACAATGGCGCACTCAAAGATGTATCTTGTGATCTCTATCCCCCGTCTGG
CTTGTTTCCCGGTACTCCGTACAGTGCCGTCGGCTTCGCTATATTATATG
AGCGAGTGGACATCCTGAGGCTTCTCCTTGAAAAAGGGTTTCTCCCCGCC
CCTTCAGACTTAGACCTCGCTAAAGAAAGAAATTTCGATGAGGCCGTGTC
ACTTTTGGCTCCATTTGCGAAACGCGAGTTACACTATCATCTGGGTATCG
CAAACTGGCATGCTTTCGGGTTGAACCCCAAATCGACGGAGGAGCGGGCT
TCAAACAGGTGGCACAGTAAATATTGTGCTGGGGGAATAGCCGACACATC
TGGGACCAGGGAACCAGAGCCAGATCTAGGTCTCTATCTTCCACCTGGGC
CGGTTGATTCAGACGGTGACCCCATCTCGGAGTCCGAAGATAGCCGTAAC
CGGAGGGATCATTTCACACAAACCATCGGATCCCAGAAGGGGACTATGAT
GGCACTCATCACAAAGGTCGGCTAGATGGCGTCCCTGGCCAACCTCCCTT
TGGAACTTTTACGCTGGGTGGCTGAATACCTAACTACTCAACGCGATATC
AGTCATCTTATGCAGACGACTAAGCGCCTCTATCACACAATACACCCTCT
TCTCTGCGAATACAATATTCAACATGATGACAGCTCCGCGCTGGTCTGGG
CTGCCCAAAAGGGAAACGCTCTCTTGGTTGACAAACTCCTCGCCGCGGGC
GCCAATATCGCCGCCTACGTTCCTCCTGCCCGGTATATAGTGAGGAAGAT
TAGGAGGGGTACAGGTGCTGATCCTTGGGCTAAGAACAATCCTTTGTTGT
ATGCGGCTCAAGGAGGACACATGGAGGTTCTGGGAATTCTGCTGGCTGAA
ACCTGTTCGGGCCACGCAGCGTCATCAGCACAGTTACGGTCGGTCCTGCA
TTGGGCGCTGCGCCAGCACGATGGCCAGTTGGTCGAGCGAATGCTCGCCC
ACAAAGCACCCTTGGATCCCGCAACAGAGGCAAGATGCGCTCCTTCAGCG
CTGGGTGTGGCCGTCGCCGCTGGCTATAAGTCTATTCTCCCTCGGCTACT
GGATATTGGGGCACGGCCAGGGCTCCGAGAGTGCCCCTGCCCAACCGAGC
AGGCTGTCTGCAATAACCGGCCTGACATTTTGCGGATACTCCTGGATCAT
GGTATCGGTCTTTACGGTGATGACGCATTGTGCCACATTGCCCATAACGA
TGACCGCAGCATGCTTCAGCTCTTCCTGGAGTATGACATTGACCTCGTAG
AATACGGTTCCGCAGCCTTGTTCACTGCGATTCGGGACGGTCATTACGAA
ATGGCAGAACTGCTGATTGACAATGGCGCACTCAAAGATGTATCTTGTGA
TCTCTATCCCCCGTCTGGCTTGTTTCCCGGTACTCCGTACAGTGCCGTCG
GCTTCGCTATATTATATGAGCGAGTGGACATCCTGAGGCTTCTCCTTGAA
AAAGGGTTTCTCCCCGCCCCTTCAGACTTAGACCTCGCTAAAGAAAGAAA
TTTCGATGAGGCCGTGTCACTTTTGGCTCCATTTGCGAAACGCGAGTTAC
ACTATCATCTGGGTATCGCAAACTGGCATGCTTTCGGGTTGAACCCCAAA
TCGACGGAGGAGCGGGCTTCAAACAGGTGGCACAGTAAATATTGTGCTGG
GGGAATAGCCGACACATCTGGGACCAGGGAACCAGAGCCAGATCTAGGTC
TCTATCTTCCACCTGGGCCGGTTGATTCAGACGGTGACCCCATCTCGGAG
TCCGAAGATAGCCGTAACCGGAGGGATCATTTCACA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_11.9 |
| DBxref | InterPro:IPR020683 |
| DBxref | InterPro:IPR036770 |
| DBxref | InterPro:IPR002110 |
| DBxref | PFAM:PF12796 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An11 | supercontig | An11:1473108..1474550 - |
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