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Sequences
The following sequences are available for this feature:
mRNA from alignment at An11:1481524..1482351- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_006986-T1 ID=CBS51388_006986-T1|Name=CBS51388_006986-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=828bp|location=Sequence derived from alignment at An11:1481524..1482351- (Aspergillus niger CBS 513.88)
ATGTCCTTGACGCTGGAAAGCCAGATCCAGCAGAGTCTCGAGGCCGACAT
CGCCAATGGCAAACTCTCGGCCGTCAGGGAACTTTACCAGTTAACAGACC
CAGATGGACAGCCCAGTCTACTAGAACAGATCGCTGCACTCGCTGCAAAG
CACATTCAGCTTGACATTATAGACTGGGTATTCACTGAAGGTTTCCAGGT
ACCTCTTGAAACACTAAATGACGAGTTCTACTTCCAAGTATGCGCCGCTG
GATCACTTGGGTTGTGGAAAAGAGTTGTCAAGAATGGCTTCAACCTAAAT
GGCCATCGCAGTGAGTACATAGGTGATGCTCTGAGCCTGGCAGCATACGA
GGGTAATATTGACATTGTACGCTTCCTTTTGGAAAATGGACAGGATCCAA
ATGATTCCTGGGCAGGGTATGATGATATGGAACCGAGCGTGGCTGCGTAA
GCGGGTGAGAGGCCATCTCTGATGATTCTCCATCTTGTACTACAACATGG
ATGGAACAAGAAGGGTAGTGTCGCGCATATTGCGGCAGCTGAAATGGGCA
ATATGGAAGCACTGAAGTTACTGGTAGAGCATGGCGCAGATTTGGAGGAG
GCCCGCGGGTGGTGGTTCAATTGTGGTGTGGAAGGGGATGTATGGGGGAC
TGCACTGTATCGAGCAGCCTTTAAGGGCCAGAGAGATTCTGTGGCGTATC
TGCTAGACAAGGGAGCCAGCACCAGGTTCAAGGATGAAAAGGGGCGGTCT
ATCATGTGGGCGGCGAGACAAGGGGATAATAAAGAGGTGATCAGCCTGCT
GCTGGATGTTGGGCTGGAGGGAGAATGA back to topCoding sequence (CDS) from alignment at An11:1481524..1482351- >CBS51388_006986-T1 ID=CBS51388_006986-T1|Name=CBS51388_006986-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1512bp|location=Sequence derived from alignment at An11:1481524..1482351- (Aspergillus niger CBS 513.88)
TGTCGCGCATATTGCGGCAGCTGAAATGGGCAATATGGAAGCACTGAAGT
TACTGGTAGAGCATGGCGCAGATTTGGAGGAGGCCCGCGGGTGGTGGTTC
AATTGTGGTGTGGAAGGGGATGTATGGGGGACTGCACTGTATCGAGCAGC
CTTTAAGGGCCAGAGAGATTCTGTGGCGTATCTGCTAGACAAGGGAGCCA
GCACCAGGTTCAAGGATGAAAAGGGGCGGTCTATCATGTGGGCGGCGAGA
CAAGGGGATAATAAAGAGGTGATCAGCCTGCTGCTGGATGTTGGGCTGGA
GGGAGAATGAATGTCCTTGACGCTGGAAAGCCAGATCCAGCAGAGTCTCG
AGGCCGACATCGCCAATGGCAAACTCTCGGCCGTCAGGGAACTTTACCAG
TTAACAGACCCAGATGGACAGCCCAGTCTACTAGAACAGATCGCTGCACT
CGCTGCAAAGCACATTCAGCTTGACATTATAGACTGGGTATTCACTGAAG
GTTTCCAGGTACCTCTTGAAACACTAAATGACGAGTTCTACTTCCAAGTA
TGCGCCGCTGGATCACTTGGGTTGTGGAAAAGAGTTGTCAAGAATGGCTT
CAACCTAAATGGCCATCGCAGTGAGTACATAGGTGATGCTCTGAGCCTGG
CAGCATACGAGGGTAATATTGACATTGTACGCTTCCTTTTGGAAAATGGA
CAGGATCCAAATGATTCCTGGGCAGGGTATGATGATATGGAACCGAGCGT
GGCTGCTGTCGCGCATATTGCGGCAGCTGAAATGGGCAATATGGAAGCAC
TGAAGTTACTGGTAGAGCATGGCGCAGATTTGGAGGAGGCCCGCGGGTGG
TGGTTCAATTGTGGTGTGGAAGGGGATGTATGGGGGACTGCACTGTATCG
AGCAGCCTTTAAGGGCCAGAGAGATTCTGTGGCGTATCTGCTAGACAAGG
GAGCCAGCACCAGGTTCAAGGATGAAAAGGGGCGGTCTATCATGTGGGCG
GCGAGACAAGGGGATAATAAAGAGGTGATCAGCCTGCTGCTGGATGTTGG
GCTGGAGGGAGAATGAATGTCCTTGACGCTGGAAAGCCAGATCCAGCAGA
GTCTCGAGGCCGACATCGCCAATGGCAAACTCTCGGCCGTCAGGGAACTT
TACCAGTTAACAGACCCAGATGGACAGCCCAGTCTACTAGAACAGATCGC
TGCACTCGCTGCAAAGCACATTCAGCTTGACATTATAGACTGGGTATTCA
CTGAAGGTTTCCAGGTACCTCTTGAAACACTAAATGACGAGTTCTACTTC
CAAGTATGCGCCGCTGGATCACTTGGGTTGTGGAAAAGAGTTGTCAAGAA
TGGCTTCAACCTAAATGGCCATCGCAGTGAGTACATAGGTGATGCTCTGA
GCCTGGCAGCATACGAGGGTAATATTGACATTGTACGCTTCCTTTTGGAA
AATGGACAGGATCCAAATGATTCCTGGGCAGGGTATGATGATATGGAACC
GAGCGTGGCTGC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_11.9 |
| DBxref | InterPro:IPR036770 |
| DBxref | InterPro:IPR020683 |
| DBxref | InterPro:IPR002110 |
| DBxref | PFAM:PF13637 |
| DBxref | PFAM:PF13606 |
| DBxref | PFAM:PF12796 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An11 | supercontig | An11:1481524..1482351 - |
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