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Sequences
The following sequences are available for this feature:
mRNA from alignment at An11:1498248..1499217- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_006993-T1 ID=CBS51388_006993-T1|Name=CBS51388_006993-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=970bp|location=Sequence derived from alignment at An11:1498248..1499217- (Aspergillus niger CBS 513.88)
ATGACCGGTAGCCCGGTCCAGTTTAGAACCCTGGAAGGCAGAGAGGAGCT
CAGCGCGCCGGCGTATATCTCTAGCCTGGAACCCACACCGGCACCTCCGA
GTACGTCTCATCTCTTTCAAGTCCCATGCAAGGTAAACCATGGGCGCGAA
TCTACCTCTATATTTGGCCTTGCTGGCAGGCATTATCCCCTGGTCAACTG
CCTCCTCCCCTCCCCTAAATGCTCGAGACGATGGCGCCTTCTCGCCTCCC
TACTACCCAGCCCCTAATGGAGGCTGGCTTTCCGACTGGGCTAGCGCATA
CGAGAAGGCGCAGAAGGTCGTCAGTAACATGACGCTGGCGGAAAAAATGA
ACCTCACGACTGGGACCGGCATGTACATGGGCCCCTGTGCGGGCCAGACA
GGAAGTGCGCTTCGGTTTGGTATTCCGAATCTCTGTCTGCATGATTCCCC
GCTGGGCATTCGCAACTCGGACCATAACACGGCCTTCCCTCCTGGTGTTA
CGGTGGGCGCGACATTTGACAAGGAGCTCATGTATCAGCGCGGCGTTGAA
CTCGGGGAAGAGGCCCGTGGCAAGGGTGTTAATGTTCTCTTGGGCCCGGT
CGTTGGTCCGACATTTCGCAAGCCGAGAGGAGGCCGTGGCTGGGAGGGCT
TTGGCGCGGATCCAAGTCTGCAGGCCATCGGGGGTGCGCTGACGATTCAG
GGCATGCAGAGTACGGGGGCGATCGCGTGTCTTAAGCACTTTATCGGTAA
TGAGCAGGAGATGCATCGCATGAGCAGTGTTATTACGCAGGGGTATTCTT
CGAATATTGATGATCGGACTCTTCATGAACTCTACTTGTGGCCGTTTGCG
GAGGGCGTTCGTGCTGGGACTGGGTCGGTGATGATGGCTTACAATGATGT
AGGTGCATTTTCCACAAGTTCAAGGGTATCTCACTCATCTGTTGTTCTAG
GTCAACCGTTCAGCGTGTAG back to topCoding sequence (CDS) from alignment at An11:1498248..1499217- >CBS51388_006993-T1 ID=CBS51388_006993-T1|Name=CBS51388_006993-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1782bp|location=Sequence derived from alignment at An11:1498248..1499217- (Aspergillus niger CBS 513.88)
GCATTATCCCCTGGTCAACTGCCTCCTCCCCTCCCCTAAATGCTCGAGAC
GATGGCGCCTTCTCGCCTCCCTACTACCCAGCCCCTAATGGAGGCTGGCT
TTCCGACTGGGCTAGCGCATACGAGAAGGCGCAGAAGGTCGTCAGTAACA
TGACGCTGGCGGAAAAAATGAACCTCACGACTGGGACCGGCATGTACATG
GGCCCCTGTGCGGGCCAGACAGGAAGTGCGCTTCGGTTTGGTATTCCGAA
TCTCTGTCTGCATGATTCCCCGCTGGGCATTCGCAACTCGGACCATAACA
CGGCCTTCCCTCCTGGTGTTACGGTGGGCGCGACATTTGACAAGGAGCTC
ATGTATCAGCGCGGCGTTGAACTCGGGGAAGAGGCCCGTGGCAAGGGTGT
TAATGTTCTCTTGGGCCCGGTCGTTGGTCCGACATTTCGCAAGCCGAGAG
GAGGCCGTGGCTGGGAGGGCTTTGGCGCGGATCCAAGTCTGCAGGCCATC
GGGGGTGCGCTGACGATTCAGGGCATGCAGAGTACGGGGGCGATCGCGTG
TCTTAAGCACTTTATCGGTAATGAGCAGGAGATGCATCGCATGAGCAGTG
TTATTACGCAGGGGTATTCTTCGAATATTGATGATCGGACTCTTCATGAA
CTCTACTTGTGGCCGTTTGCGGAGGGCGTTCGTGCTGGGACTGGGTCGGT
GATGATGGCTTACAATGATGTAGGTGCATTTTCCACAAGTTCAAGGGTAT
CTCACTCATCTGTTGTTCTAGGTCAACCGTTCAGCGTGTAGATGACCGGT
AGCCCGGTCCAGTTTAGAACCCTGGAAGGCAGAGAGGAGCTCAGCGCGCC
GGCGTATATCTCTAGCCTGGAACCCACACCGGCACCTCCGAGCATTATCC
CCTGGTCAACTGCCTCCTCCCCTCCCCTAAATGCTCGAGACGATGGCGCC
TTCTCGCCTCCCTACTACCCAGCCCCTAATGGAGGCTGGCTTTCCGACTG
GGCTAGCGCATACGAGAAGGCGCAGAAGGTCGTCAGTAACATGACGCTGG
CGGAAAAAATGAACCTCACGACTGGGACCGGCATGTACATGGGCCCCTGT
GCGGGCCAGACAGGAAGTGCGCTTCGGTTTGGTATTCCGAATCTCTGTCT
GCATGATTCCCCGCTGGGCATTCGCAACTCGGACCATAACACGGCCTTCC
CTCCTGGTGTTACGGTGGGCGCGACATTTGACAAGGAGCTCATGTATCAG
CGCGGCGTTGAACTCGGGGAAGAGGCCCGTGGCAAGGGTGTTAATGTTCT
CTTGGGCCCGGTCGTTGGTCCGACATTTCGCAAGCCGAGAGGAGGCCGTG
GCTGGGAGGGCTTTGGCGCGGATCCAAGTCTGCAGGCCATCGGGGGTGCG
CTGACGATTCAGGGCATGCAGAGTACGGGGGCGATCGCGTGTCTTAAGCA
CTTTATCGGTAATGAGCAGGAGATGCATCGCATGAGCAGTGTTATTACGC
AGGGGTATTCTTCGAATATTGATGATCGGACTCTTCATGAACTCTACTTG
TGGCCGTTTGCGGAGGGCGTTCGTGCTGGGACTGGGTCGGTGATGATGGC
TTACAATGATGTAGGTGCATTTTCCACAAGTTCAAGGGTATCTCACTCAT
CTGTTGTTCTAGGTCAACCGTTCAGCGTGTAGATGACCGGTAGCCCGGTC
CAGTTTAGAACCCTGGAAGGCAGAGAGGAGCTCAGCGCGCCGGCGTATAT
CTCTAGCCTGGAACCCACACCGGCACCTCCGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0005975 | carbohydrate metabolic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | CAZy:GH3 |
| DBxref | InterPro:IPR017853 |
| DBxref | InterPro:IPR036962 |
| DBxref | InterPro:IPR001764 |
| DBxref | PFAM:PF00933 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An11 | supercontig | An11:1498248..1499217 - |
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