You are here

Home

CBS51388_007011-T1, CBS51388_007011-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_007011-T1
Unique NameCBS51388_007011-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An11:1542163..1543675-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_007011-T1 ID=CBS51388_007011-T1|Name=CBS51388_007011-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1513bp|location=Sequence derived from alignment at An11:1542163..1543675- (Aspergillus niger CBS 513.88)
ATGTCCGAGTCAAATCCACTCCATCCAACCCTAACCCTCCCTCCAATAAT
CCTCGGCGGCTCAGGCTTCAGCGACCAATCCCACCCCAATCCACAAACCC
TCCCCGTTGCAACAATCATCCGTCGCGCCTTCGACGAAGGCATCCTTGCT
ATCGACACCTCCCCCTACTACCACCCCTCCGAGCACCTCCTCGGTACCGC
CCTCTCCGACCCCCAGATAACAACCCGCTACGCACGCAGCGACTACATTC
TCATGACTAAAGTCGGGCGCCTCTCGACCAGCGCCTTTGACTATTCCCCC
ACCTGGGTCCGCCAATCAGTCCACAACTCCCTCGAGCGCCTACACACCAC
CTACCTAGACGTAGTCTTCTGCCACGACGTGGAATTCGTCTCGGAGCACG
AAGCCGTCGAAGCTGTCGGCGTGCTCTTCGACCTCCGCCGACAGGGCTAT
ATCAAGTACGTGGGCATCTCCGGCTATCCACTCGAGACGCTAGTCTCTGT
CGCGCATGCCGTGCGACACGTATATGGCCAGCCATTAGACGTCGTGCAGA
CCTGGGCTCAGTTGACAGTGCAGAACACTAAGCTGGAGCGGTATGGCATT
CCGGCTCTTCGTGAGGCTGGCGTGTCGGTGGTTTGTAGTTCGAGTCCGCT
TGCCTCCGGGTTGTTGCGTGCGGGAAAGGTGCCTTGTGGGAGACTGGGGG
ATTGGCATCCTGCGCCTGAGGGGCTGAGGAGCGCTGTGAGTATCGCTTCG
GGTTGGTTGGAGTGTCAGGGGTTCGGGTTAGCGGGGTTGGCGTTGCGGTT
TTCGTTGGCGAAAGCTGTGCGGGCTGCCGATAGATACGCCGTCTCTGTCT
CTACTGTCCTGGGGGTATCGTCCTTGAAGGATGTGGAAGAGGATGTGGAG
GTTGCGCGGGACATTTTACGTGATCTGGATGCTGGGCCTTTGGATAAAAG
GATGGAAGTGATGGGCGGCCTGTCGCGTCTTCGATGGGTGAATGAAGAGG
TTGAATGTCGGGATTTACGGCTGTGTTATGGCGTGCGGAACATCTTGGGG
GAATGGGCTGAGTATGACTTGCAGAAGTAAGACATTGCTGTATAAGTAGG
ACCTTGGTATAGAATATATAGACCGATATATTTGATTTGTTCTATCTTGT
CAGCATCATTCAGTACCGTGTAGATTATATCAGATTCGTGGAAGACAAAG
ACGAACCGCAATACTATGTGCATGCCTTGAATAAGTACAACACTGCAGTA
GCAATAGAGCTGAACCCATGTTCATGGGACTTGAATAACTACCTTCCCAG
AATAATGAAAATTATATGGATATTTATATATCTGCCTGGTCTGATTGAAG
TTAAAGTAACAGTCAATTACTAACTACATAGAATACCTCTTGAATAATCC
TAGCATCTTCCGTAACTACTTCTATAATTCTATTACTATATCTGAAATAG
GGAAGATTTAATCTCAAGCTAGGAAAGCTAAACCTAGATGATATAATCTT
CTATCTAGACTAA
back to top

Coding sequence (CDS) from alignment at An11:1542163..1543675-

>CBS51388_007011-T1 ID=CBS51388_007011-T1|Name=CBS51388_007011-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3933bp|location=Sequence derived from alignment at An11:1542163..1543675- (Aspergillus niger CBS 513.88)
GGAAGATTTAATCTCAAGCTAGGAAAGCTAAACCTAGATGATATAATCTT
CTATCTAGACTAAATTCGTGGAAGACAAAGACGAACCGCAATACTATGTG
CATGCCTTGAATAAGTACAACACTGCAGTAGCAATAGAGCTGAACCCATG
TTCATGGGACTTGAATAACTACCTTCCCAGAATAATGAAAATTATATGGA
TATTTATATATCTGCCTGGTCTGATTGAAGTTAAAATGTCCGAGTCAAAT
CCACTCCATCCAACCCTAACCCTCCCTCCAATAATCCTCGGCGGCTCAGG
CTTCAGCGACCAATCCCACCCCAATCCACAAACCCTCCCCGTTGCAACAA
TCATCCGTCGCGCCTTCGACGAAGGCATCCTTGCTATCGACACCTCCCCC
TACTACCACCCCTCCGAGCACCTCCTCGGTACCGCCCTCTCCGACCCCCA
GATAACAACCCGCTACGCACGCAGCGACTACATTCTCATGACTAAAGTCG
GGCGCCTCTCGACCAGCGCCTTTGACTATTCCCCCACCTGGGTCCGCCAA
TCAGTCCACAACTCCCTCGAGCGCCTACACACCACCTACCTAGACGTAGT
CTTCTGCCACGACGTGGAATTCGTCTCGGAGCACGAAGCCGTCGAAGCTG
TCGGCGTGCTCTTCGACCTCCGCCGACAGGGCTATATCAAGTACGTGGGC
ATCTCCGGCTATCCACTCGAGACGCTAGTCTCTGTCGCGCATGCCGTGCG
ACACGTATATGGCCAGCCATTAGACGTCGTGCAGACCTGGGCTCAGTTGA
CAGTGCAGAACACTAAGCTGGAGCGGTATGGCATTCCGGCTCTTCGTGAG
GCTGGCGTGTCGGTGGTTTGTAGTTCGAGTCCGCTTGCCTCCGGGTTGTT
GCGTGCGGGAAAGGTGCCTTGTGGGAGACTGGGGGATTGGCATCCTGCGC
CTGAGGGGCTGAGGAGCGCTGTGAGTATCGCTTCGGGTTGGTTGGAGTGT
CAGGGGTTCGGGTTAGCGGGGTTGGCGTTGCGGTTTTCGTTGGCGAAAGC
TGTGCGGGCTGCCGATAGATACGCCGTCTCTGTCTCTACTGTCCTGGGGG
TATCGTCCTTGAAGGATGTGGAAGAGGATGTGGAGGTTGCGCGGGACATT
TTACGTGATCTGGATGCTGGGCCTTTGGATAAAAGGATGGAAGTGATGGG
CGGCCTGTCGCGTCTTCGATGGGTGAATGAAGAGGTTGAATGTCGGGATT
TACGGCTGTGTTATGGCGTGCGGAACATCTTGGGGGAATGGGCTGAGTAT
GACTTGCAGAAGGAAGATTTAATCTCAAGCTAGGAAAGCTAAACCTAGAT
GATATAATCTTCTATCTAGACTAAATTCGTGGAAGACAAAGACGAACCGC
AATACTATGTGCATGCCTTGAATAAGTACAACACTGCAGTAGCAATAGAG
CTGAACCCATGTTCATGGGACTTGAATAACTACCTTCCCAGAATAATGAA
AATTATATGGATATTTATATATCTGCCTGGTCTGATTGAAGTTAAAATGT
CCGAGTCAAATCCACTCCATCCAACCCTAACCCTCCCTCCAATAATCCTC
GGCGGCTCAGGCTTCAGCGACCAATCCCACCCCAATCCACAAACCCTCCC
CGTTGCAACAATCATCCGTCGCGCCTTCGACGAAGGCATCCTTGCTATCG
ACACCTCCCCCTACTACCACCCCTCCGAGCACCTCCTCGGTACCGCCCTC
TCCGACCCCCAGATAACAACCCGCTACGCACGCAGCGACTACATTCTCAT
GACTAAAGTCGGGCGCCTCTCGACCAGCGCCTTTGACTATTCCCCCACCT
GGGTCCGCCAATCAGTCCACAACTCCCTCGAGCGCCTACACACCACCTAC
CTAGACGTAGTCTTCTGCCACGACGTGGAATTCGTCTCGGAGCACGAAGC
CGTCGAAGCTGTCGGCGTGCTCTTCGACCTCCGCCGACAGGGCTATATCA
AGTACGTGGGCATCTCCGGCTATCCACTCGAGACGCTAGTCTCTGTCGCG
CATGCCGTGCGACACGTATATGGCCAGCCATTAGACGTCGTGCAGACCTG
GGCTCAGTTGACAGTGCAGAACACTAAGCTGGAGCGGTATGGCATTCCGG
CTCTTCGTGAGGCTGGCGTGTCGGTGGTTTGTAGTTCGAGTCCGCTTGCC
TCCGGGTTGTTGCGTGCGGGAAAGGTGCCTTGTGGGAGACTGGGGGATTG
GCATCCTGCGCCTGAGGGGCTGAGGAGCGCTGTGAGTATCGCTTCGGGTT
GGTTGGAGTGTCAGGGGTTCGGGTTAGCGGGGTTGGCGTTGCGGTTTTCG
TTGGCGAAAGCTGTGCGGGCTGCCGATAGATACGCCGTCTCTGTCTCTAC
TGTCCTGGGGGTATCGTCCTTGAAGGATGTGGAAGAGGATGTGGAGGTTG
CGCGGGACATTTTACGTGATCTGGATGCTGGGCCTTTGGATAAAAGGATG
GAAGTGATGGGCGGCCTGTCGCGTCTTCGATGGGTGAATGAAGAGGTTGA
ATGTCGGGATTTACGGCTGTGTTATGGCGTGCGGAACATCTTGGGGGAAT
GGGCTGAGTATGACTTGCAGAAGGAAGATTTAATCTCAAGCTAGGAAAGC
TAAACCTAGATGATATAATCTTCTATCTAGACTAAATTCGTGGAAGACAA
AGACGAACCGCAATACTATGTGCATGCCTTGAATAAGTACAACACTGCAG
TAGCAATAGAGCTGAACCCATGTTCATGGGACTTGAATAACTACCTTCCC
AGAATAATGAAAATTATATGGATATTTATATATCTGCCTGGTCTGATTGA
AGTTAAAATGTCCGAGTCAAATCCACTCCATCCAACCCTAACCCTCCCTC
CAATAATCCTCGGCGGCTCAGGCTTCAGCGACCAATCCCACCCCAATCCA
CAAACCCTCCCCGTTGCAACAATCATCCGTCGCGCCTTCGACGAAGGCAT
CCTTGCTATCGACACCTCCCCCTACTACCACCCCTCCGAGCACCTCCTCG
GTACCGCCCTCTCCGACCCCCAGATAACAACCCGCTACGCACGCAGCGAC
TACATTCTCATGACTAAAGTCGGGCGCCTCTCGACCAGCGCCTTTGACTA
TTCCCCCACCTGGGTCCGCCAATCAGTCCACAACTCCCTCGAGCGCCTAC
ACACCACCTACCTAGACGTAGTCTTCTGCCACGACGTGGAATTCGTCTCG
GAGCACGAAGCCGTCGAAGCTGTCGGCGTGCTCTTCGACCTCCGCCGACA
GGGCTATATCAAGTACGTGGGCATCTCCGGCTATCCACTCGAGACGCTAG
TCTCTGTCGCGCATGCCGTGCGACACGTATATGGCCAGCCATTAGACGTC
GTGCAGACCTGGGCTCAGTTGACAGTGCAGAACACTAAGCTGGAGCGGTA
TGGCATTCCGGCTCTTCGTGAGGCTGGCGTGTCGGTGGTTTGTAGTTCGA
GTCCGCTTGCCTCCGGGTTGTTGCGTGCGGGAAAGGTGCCTTGTGGGAGA
CTGGGGGATTGGCATCCTGCGCCTGAGGGGCTGAGGAGCGCTGTGAGTAT
CGCTTCGGGTTGGTTGGAGTGTCAGGGGTTCGGGTTAGCGGGGTTGGCGT
TGCGGTTTTCGTTGGCGAAAGCTGTGCGGGCTGCCGATAGATACGCCGTC
TCTGTCTCTACTGTCCTGGGGGTATCGTCCTTGAAGGATGTGGAAGAGGA
TGTGGAGGTTGCGCGGGACATTTTACGTGATCTGGATGCTGGGCCTTTGG
ATAAAAGGATGGAAGTGATGGGCGGCCTGTCGCGTCTTCGATGGGTGAAT
GAAGAGGTTGAATGTCGGGATTTACGGCTGTGTTATGGCGTGCGGAACAT
CTTGGGGGAATGGGCTGAGTATGACTTGCAGAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_007011CBS51388_007011Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007011-T1CBS51388_007011-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007011-T1.cdsCBS51388_007011-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007011-T1.exon3CBS51388_007011-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_007011-T1.exon2CBS51388_007011-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_007011-T1.exon1CBS51388_007011-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
NoteantiSMASH:Cluster_11.10
NoteSMCOG1039:aldo/keto reductase family oxidoreductase
DBxrefInterPro:IPR036812
DBxrefInterPro:IPR023210
DBxrefPFAM:PF00248
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An11supercontigAn11:1542163..1543675 -
Powered by Drupal