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Sequences
The following sequences are available for this feature:
mRNA from alignment at An11:1544862..1547124- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_007012-T1 ID=CBS51388_007012-T1|Name=CBS51388_007012-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2263bp|location=Sequence derived from alignment at An11:1544862..1547124- (Aspergillus niger CBS 513.88) ATGCTCGTCAGTGATCGCTGTAGAAGTACGCTGAGAAATCCCACTCCCTT
TCTGCCGCCGGAAGGGTTGGTCCGTCCTTGCTGACATGGTCGGTTCACTA
TAGCTCTAGGTCGTCCCTGTCAATACAAACGCAAGTTCAAGAAACGAGGC
CGCAAAGCGGCCGTCAAACACAAGAGTCCGCTACCAGCCGAAGCCCATTG
CGATCTAGATGTACCGAGTACTCCATCTTCCGGAGGGATTCATCCAACTT
CCTTTGGACCAGCCCGCGACGAGGCCTCGATAGATGGCGTACCAGCGGTT
TCGGGCTTTCTTGCGATGGGCCGCGAGCTACCAGAGTCACACGAGCCAGT
GAACATGAATAATTTCGAGGCCACTTTCGCAACATATCAGGCCAACATTC
CCCGGTCATTCGACTTATCGCAGCCTGAGTCGGGGGCGACTGCGCTGTCC
CCAATCCCTCGATTTCCCACGCTGGCGCTAACTCCCCCGGATGCTAGCGC
AACGTCGGCGTCAAGCACGTCGTTGGCCGCGGGCTGCCGCTTTCCATGTC
TCGAGCCCCTCCTTCCTCATCTGAAGAGTGTCTTGAGCCCAGAAGACGCT
TGCAGTCTGCTCGAAACCTTCTTTACCGAGCCCGGTGAGTCCGCCGGATC
CTCCCATAGCCCCTACGTTCTCTCCCCCGTGCTTCGAAGATCCGCGGTCT
TGGATCCGATCAAGCCGCGGCCGACCTCTCCAGCGCTTCTGGCAACAATG
CTTTGGTGTGCAGCGCACACGGCAAATGGGAGACTGTACTATATCCCAGG
ATCGCGGGCACGAATCGTTGATCACCTTTACTGCCTGGTGATGTCCTTAC
TGCAGCGCCTGGACCCGGATAATTGGCGTCGCGTAAACGGTAAGTGTATA
TCTGCACCCTCCCATCAACCCCGGGTGATGAAAGTATCCAGTAGGCAAGC
GGCCAATAATTGGAGTTAGGGGGCTGGCAGTTGGAAAACGACTGTGTCTC
CGCCCTTGATGCTGGAGACCCAGACCGCGCTCGCAGGACTTTCGGGACTG
GCCCTACCCCTACGGTAGACGATGTCCTCACGTTCGTCATCCTGACTATC
GTTATTTCCGGTGGCGAATACAAGTCAGACTGCTTGAAGTGGTGGAACAA
AGCACTTCGCTTGATCAAGCATCTTGGGTTTCACCAGGACCCCTTGCGGA
CTGGCCAGCCGGAACGGGGATCACTTCAGATCATCGAAGAACAAGAAGAA
CAACGGCGGGCTTTCTGGTTGGTCTATGCCTTGGATCGGCACTTGGCCGT
ATCTCACAATCGTGCCGTTTATCTCCTCGACGCCGAATGTAAAGTGCTTA
CGCCCCTACCAGAATCTTGCTGGCAGAGGCTGCATGCCTTTACAGCTGAC
ACCCTGCCCTCGAGGACCTACGGCCCGCCAACTGTCATTTCGGGAACTGG
GCTCTTTGAGTACTTCCTCCCCTTGATGTCTATTTTGGGGGATATTATCG
AGTTTCGTCTGTGGCGCCACCATCCGCGACTGAAATTCGACGAGCATGCC
GTGGTAAGGGACATCGATATTGCACTTACCAATTGTCATCAGAGTGTTTC
AGAATGGCTTCGCGAGGTAGGTCAGACTGCAAACGCCTCGCGACCTTCCT
CGACGACTCCACGTGCCGAGGTGACAATGGCATACGCCTCATATATTATC
AAGGTTCTCTTTGTAATGCTGTATGGGGAATGGGATGCCACCAGTATGCT
GGAAAACCATGGGGACTGGATCACCTCCGCACAATTCTCTGAGTGCGCCT
CTCATTCAATCGCTGCAGCCCAGCAAATCTCCTATGTCCTCTCGATCGAT
CCCGAACTGTCGTTCATGCCCTACCTGGTGGGGATTTATCTTTTCCACGG
CAGTCTCGTGCTTCTTTTGTTTGCTGAGCGAATGCCTCTCGTTGGCCCGA
ACCCGTCGGTGGAGGAAGCCTGTGAAGTAATCATCCGCGCGCATGAAGCT
TCCATCGTGACCTTGAGCACGGACTTTCAGGTTCGCATACCCCGGTTTCC
ACTTTACCTCCCCTTACCTTCCCAGGCAACGTGTGCCTTGGAATCCATGT
CTGAAACTAACTCATGTTAAAGAAAGCTTTCCGAAAGGCTTTCCGATCGG
TGCTGTTGCACTCTCGTGCCCAAGGGGAGGTGAATACCGAGCTTAGAGCC
TTGCGGCAGGATATATTGTCTATGTATCGCTGGACATTAGGGGACCCGGG
GCTGTGTCTGTAG back to topCoding sequence (CDS) from alignment at An11:1544862..1547124- >CBS51388_007012-T1 ID=CBS51388_007012-T1|Name=CBS51388_007012-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=8052bp|location=Sequence derived from alignment at An11:1544862..1547124- (Aspergillus niger CBS 513.88) AAAGCTTTCCGAAAGGCTTTCCGATCGGTGCTGTTGCACTCTCGTGCCCA AGGGGAGGTGAATACCGAGCTTAGAGCCTTGCGGCAGGATATATTGTCTA TGTATCGCTGGACATTAGGGGACCCGGGGCTGTGTCTGTAGGGGGCTGGC AGTTGGAAAACGACTGTGTCTCCGCCCTTGATGCTGGAGACCCAGACCGC GCTCGCAGGACTTTCGGGACTGGCCCTACCCCTACGGTAGACGATGTCCT CACGTTCGTCATCCTGACTATCGTTATTTCCGGTGGCGAATACAAGTCAG ACTGCTTGAAGTGGTGGAACAAAGCACTTCGCTTGATCAAGCATCTTGGG TTTCACCAGGACCCCTTGCGGACTGGCCAGCCGGAACGGGGATCACTTCA GATCATCGAAGAACAAGAAGAACAACGGCGGGCTTTCTGGTTGGTCTATG CCTTGGATCGGCACTTGGCCGTATCTCACAATCGTGCCGTTTATCTCCTC GACGCCGAATGTAAAGTGCTTACGCCCCTACCAGAATCTTGCTGGCAGAG GCTGCATGCCTTTACAGCTGACACCCTGCCCTCGAGGACCTACGGCCCGC CAACTGTCATTTCGGGAACTGGGCTCTTTGAGTACTTCCTCCCCTTGATG TCTATTTTGGGGGATATTATCGAGTTTCGTCTGTGGCGCCACCATCCGCG ACTGAAATTCGACGAGCATGCCGTGGTAAGGGACATCGATATTGCACTTA CCAATTGTCATCAGAGTGTTTCAGAATGGCTTCGCGAGGTAGGTCAGACT GCAAACGCCTCGCGACCTTCCTCGACGACTCCACGTGCCGAGGTGACAAT GGCATACGCCTCATATATTATCAAGGTTCTCTTTGTAATGCTGTATGGGG AATGGGATGCCACCAGTATGCTGGAAAACCATGGGGACTGGATCACCTCC GCACAATTCTCTGAGTGCGCCTCTCATTCAATCGCTGCAGCCCAGCAAAT CTCCTATGTCCTCTCGATCGATCCCGAACTGTCGTTCATGCCCTACCTGG TGGGGATTTATCTTTTCCACGGCAGTCTCGTGCTTCTTTTGTTTGCTGAG CGAATGCCTCTCGTTGGCCCGAACCCGTCGGTGGAGGAAGCCTGTGAAGT AATCATCCGCGCGCATGAAGCTTCCATCGTGACCTTGAGCACGGACTTTC AGCTCTAGGTCGTCCCTGTCAATACAAACGCAAGTTCAAGAAACGAGGCC GCAAAGCGGCCGTCAAACACAAGAGTCCGCTACCAGCCGAAGCCCATTGC GATCTAGATGTACCGAGTACTCCATCTTCCGGAGGGATTCATCCAACTTC CTTTGGACCAGCCCGCGACGAGGCCTCGATAGATGGCGTACCAGCGGTTT CGGGCTTTCTTGCGATGGGCCGCGAGCTACCAGAGTCACACGAGCCAGTG AACATGAATAATTTCGAGGCCACTTTCGCAACATATCAGGCCAACATTCC CCGGTCATTCGACTTATCGCAGCCTGAGTCGGGGGCGACTGCGCTGTCCC CAATCCCTCGATTTCCCACGCTGGCGCTAACTCCCCCGGATGCTAGCGCA ACGTCGGCGTCAAGCACGTCGTTGGCCGCGGGCTGCCGCTTTCCATGTCT CGAGCCCCTCCTTCCTCATCTGAAGAGTGTCTTGAGCCCAGAAGACGCTT GCAGTCTGCTCGAAACCTTCTTTACCGAGCCCGGTGAGTCCGCCGGATCC TCCCATAGCCCCTACGTTCTCTCCCCCGTGCTTCGAAGATCCGCGGTCTT GGATCCGATCAAGCCGCGGCCGACCTCTCCAGCGCTTCTGGCAACAATGC TTTGGTGTGCAGCGCACACGGCAAATGGGAGACTGTACTATATCCCAGGA TCGCGGGCACGAATCGTTGATCACCTTTACTGCCTGGTGATGTCCTTACT GCAGCGCCTGGACCCGGATAATTGGCGTCGCGTAAACGATGCTCGTCAGT GATCGCTGTAGAAAAAGCTTTCCGAAAGGCTTTCCGATCGGTGCTGTTGC ACTCTCGTGCCCAAGGGGAGGTGAATACCGAGCTTAGAGCCTTGCGGCAG GATATATTGTCTATGTATCGCTGGACATTAGGGGACCCGGGGCTGTGTCT GTAGGGGGCTGGCAGTTGGAAAACGACTGTGTCTCCGCCCTTGATGCTGG AGACCCAGACCGCGCTCGCAGGACTTTCGGGACTGGCCCTACCCCTACGG TAGACGATGTCCTCACGTTCGTCATCCTGACTATCGTTATTTCCGGTGGC GAATACAAGTCAGACTGCTTGAAGTGGTGGAACAAAGCACTTCGCTTGAT CAAGCATCTTGGGTTTCACCAGGACCCCTTGCGGACTGGCCAGCCGGAAC GGGGATCACTTCAGATCATCGAAGAACAAGAAGAACAACGGCGGGCTTTC TGGTTGGTCTATGCCTTGGATCGGCACTTGGCCGTATCTCACAATCGTGC CGTTTATCTCCTCGACGCCGAATGTAAAGTGCTTACGCCCCTACCAGAAT CTTGCTGGCAGAGGCTGCATGCCTTTACAGCTGACACCCTGCCCTCGAGG ACCTACGGCCCGCCAACTGTCATTTCGGGAACTGGGCTCTTTGAGTACTT CCTCCCCTTGATGTCTATTTTGGGGGATATTATCGAGTTTCGTCTGTGGC GCCACCATCCGCGACTGAAATTCGACGAGCATGCCGTGGTAAGGGACATC GATATTGCACTTACCAATTGTCATCAGAGTGTTTCAGAATGGCTTCGCGA GGTAGGTCAGACTGCAAACGCCTCGCGACCTTCCTCGACGACTCCACGTG CCGAGGTGACAATGGCATACGCCTCATATATTATCAAGGTTCTCTTTGTA ATGCTGTATGGGGAATGGGATGCCACCAGTATGCTGGAAAACCATGGGGA CTGGATCACCTCCGCACAATTCTCTGAGTGCGCCTCTCATTCAATCGCTG CAGCCCAGCAAATCTCCTATGTCCTCTCGATCGATCCCGAACTGTCGTTC ATGCCCTACCTGGTGGGGATTTATCTTTTCCACGGCAGTCTCGTGCTTCT TTTGTTTGCTGAGCGAATGCCTCTCGTTGGCCCGAACCCGTCGGTGGAGG AAGCCTGTGAAGTAATCATCCGCGCGCATGAAGCTTCCATCGTGACCTTG AGCACGGACTTTCAGCTCTAGGTCGTCCCTGTCAATACAAACGCAAGTTC AAGAAACGAGGCCGCAAAGCGGCCGTCAAACACAAGAGTCCGCTACCAGC CGAAGCCCATTGCGATCTAGATGTACCGAGTACTCCATCTTCCGGAGGGA TTCATCCAACTTCCTTTGGACCAGCCCGCGACGAGGCCTCGATAGATGGC GTACCAGCGGTTTCGGGCTTTCTTGCGATGGGCCGCGAGCTACCAGAGTC ACACGAGCCAGTGAACATGAATAATTTCGAGGCCACTTTCGCAACATATC AGGCCAACATTCCCCGGTCATTCGACTTATCGCAGCCTGAGTCGGGGGCG ACTGCGCTGTCCCCAATCCCTCGATTTCCCACGCTGGCGCTAACTCCCCC GGATGCTAGCGCAACGTCGGCGTCAAGCACGTCGTTGGCCGCGGGCTGCC GCTTTCCATGTCTCGAGCCCCTCCTTCCTCATCTGAAGAGTGTCTTGAGC CCAGAAGACGCTTGCAGTCTGCTCGAAACCTTCTTTACCGAGCCCGGTGA GTCCGCCGGATCCTCCCATAGCCCCTACGTTCTCTCCCCCGTGCTTCGAA GATCCGCGGTCTTGGATCCGATCAAGCCGCGGCCGACCTCTCCAGCGCTT CTGGCAACAATGCTTTGGTGTGCAGCGCACACGGCAAATGGGAGACTGTA CTATATCCCAGGATCGCGGGCACGAATCGTTGATCACCTTTACTGCCTGG TGATGTCCTTACTGCAGCGCCTGGACCCGGATAATTGGCGTCGCGTAAAC GATGCTCGTCAGTGATCGCTGTAGAAAAAGCTTTCCGAAAGGCTTTCCGA TCGGTGCTGTTGCACTCTCGTGCCCAAGGGGAGGTGAATACCGAGCTTAG AGCCTTGCGGCAGGATATATTGTCTATGTATCGCTGGACATTAGGGGACC CGGGGCTGTGTCTGTAGGGGGCTGGCAGTTGGAAAACGACTGTGTCTCCG CCCTTGATGCTGGAGACCCAGACCGCGCTCGCAGGACTTTCGGGACTGGC CCTACCCCTACGGTAGACGATGTCCTCACGTTCGTCATCCTGACTATCGT TATTTCCGGTGGCGAATACAAGTCAGACTGCTTGAAGTGGTGGAACAAAG CACTTCGCTTGATCAAGCATCTTGGGTTTCACCAGGACCCCTTGCGGACT GGCCAGCCGGAACGGGGATCACTTCAGATCATCGAAGAACAAGAAGAACA ACGGCGGGCTTTCTGGTTGGTCTATGCCTTGGATCGGCACTTGGCCGTAT CTCACAATCGTGCCGTTTATCTCCTCGACGCCGAATGTAAAGTGCTTACG CCCCTACCAGAATCTTGCTGGCAGAGGCTGCATGCCTTTACAGCTGACAC CCTGCCCTCGAGGACCTACGGCCCGCCAACTGTCATTTCGGGAACTGGGC TCTTTGAGTACTTCCTCCCCTTGATGTCTATTTTGGGGGATATTATCGAG TTTCGTCTGTGGCGCCACCATCCGCGACTGAAATTCGACGAGCATGCCGT GGTAAGGGACATCGATATTGCACTTACCAATTGTCATCAGAGTGTTTCAG AATGGCTTCGCGAGGTAGGTCAGACTGCAAACGCCTCGCGACCTTCCTCG ACGACTCCACGTGCCGAGGTGACAATGGCATACGCCTCATATATTATCAA GGTTCTCTTTGTAATGCTGTATGGGGAATGGGATGCCACCAGTATGCTGG AAAACCATGGGGACTGGATCACCTCCGCACAATTCTCTGAGTGCGCCTCT CATTCAATCGCTGCAGCCCAGCAAATCTCCTATGTCCTCTCGATCGATCC CGAACTGTCGTTCATGCCCTACCTGGTGGGGATTTATCTTTTCCACGGCA GTCTCGTGCTTCTTTTGTTTGCTGAGCGAATGCCTCTCGTTGGCCCGAAC CCGTCGGTGGAGGAAGCCTGTGAAGTAATCATCCGCGCGCATGAAGCTTC CATCGTGACCTTGAGCACGGACTTTCAGCTCTAGGTCGTCCCTGTCAATA CAAACGCAAGTTCAAGAAACGAGGCCGCAAAGCGGCCGTCAAACACAAGA GTCCGCTACCAGCCGAAGCCCATTGCGATCTAGATGTACCGAGTACTCCA TCTTCCGGAGGGATTCATCCAACTTCCTTTGGACCAGCCCGCGACGAGGC CTCGATAGATGGCGTACCAGCGGTTTCGGGCTTTCTTGCGATGGGCCGCG AGCTACCAGAGTCACACGAGCCAGTGAACATGAATAATTTCGAGGCCACT TTCGCAACATATCAGGCCAACATTCCCCGGTCATTCGACTTATCGCAGCC TGAGTCGGGGGCGACTGCGCTGTCCCCAATCCCTCGATTTCCCACGCTGG CGCTAACTCCCCCGGATGCTAGCGCAACGTCGGCGTCAAGCACGTCGTTG GCCGCGGGCTGCCGCTTTCCATGTCTCGAGCCCCTCCTTCCTCATCTGAA GAGTGTCTTGAGCCCAGAAGACGCTTGCAGTCTGCTCGAAACCTTCTTTA CCGAGCCCGGTGAGTCCGCCGGATCCTCCCATAGCCCCTACGTTCTCTCC CCCGTGCTTCGAAGATCCGCGGTCTTGGATCCGATCAAGCCGCGGCCGAC CTCTCCAGCGCTTCTGGCAACAATGCTTTGGTGTGCAGCGCACACGGCAA ATGGGAGACTGTACTATATCCCAGGATCGCGGGCACGAATCGTTGATCAC CTTTACTGCCTGGTGATGTCCTTACTGCAGCGCCTGGACCCGGATAATTG GCGTCGCGTAAACGATGCTCGTCAGTGATCGCTGTAGAAAAAGCTTTCCG AAAGGCTTTCCGATCGGTGCTGTTGCACTCTCGTGCCCAAGGGGAGGTGA ATACCGAGCTTAGAGCCTTGCGGCAGGATATATTGTCTATGTATCGCTGG ACATTAGGGGACCCGGGGCTGTGTCTGTAGGGGGCTGGCAGTTGGAAAAC GACTGTGTCTCCGCCCTTGATGCTGGAGACCCAGACCGCGCTCGCAGGAC TTTCGGGACTGGCCCTACCCCTACGGTAGACGATGTCCTCACGTTCGTCA TCCTGACTATCGTTATTTCCGGTGGCGAATACAAGTCAGACTGCTTGAAG TGGTGGAACAAAGCACTTCGCTTGATCAAGCATCTTGGGTTTCACCAGGA CCCCTTGCGGACTGGCCAGCCGGAACGGGGATCACTTCAGATCATCGAAG AACAAGAAGAACAACGGCGGGCTTTCTGGTTGGTCTATGCCTTGGATCGG CACTTGGCCGTATCTCACAATCGTGCCGTTTATCTCCTCGACGCCGAATG TAAAGTGCTTACGCCCCTACCAGAATCTTGCTGGCAGAGGCTGCATGCCT TTACAGCTGACACCCTGCCCTCGAGGACCTACGGCCCGCCAACTGTCATT TCGGGAACTGGGCTCTTTGAGTACTTCCTCCCCTTGATGTCTATTTTGGG GGATATTATCGAGTTTCGTCTGTGGCGCCACCATCCGCGACTGAAATTCG ACGAGCATGCCGTGGTAAGGGACATCGATATTGCACTTACCAATTGTCAT CAGAGTGTTTCAGAATGGCTTCGCGAGGTAGGTCAGACTGCAAACGCCTC GCGACCTTCCTCGACGACTCCACGTGCCGAGGTGACAATGGCATACGCCT CATATATTATCAAGGTTCTCTTTGTAATGCTGTATGGGGAATGGGATGCC ACCAGTATGCTGGAAAACCATGGGGACTGGATCACCTCCGCACAATTCTC TGAGTGCGCCTCTCATTCAATCGCTGCAGCCCAGCAAATCTCCTATGTCC TCTCGATCGATCCCGAACTGTCGTTCATGCCCTACCTGGTGGGGATTTAT CTTTTCCACGGCAGTCTCGTGCTTCTTTTGTTTGCTGAGCGAATGCCTCT CGTTGGCCCGAACCCGTCGGTGGAGGAAGCCTGTGAAGTAATCATCCGCG CGCATGAAGCTTCCATCGTGACCTTGAGCACGGACTTTCAGCTCTAGGTC GTCCCTGTCAATACAAACGCAAGTTCAAGAAACGAGGCCGCAAAGCGGCC GTCAAACACAAGAGTCCGCTACCAGCCGAAGCCCATTGCGATCTAGATGT ACCGAGTACTCCATCTTCCGGAGGGATTCATCCAACTTCCTTTGGACCAG CCCGCGACGAGGCCTCGATAGATGGCGTACCAGCGGTTTCGGGCTTTCTT GCGATGGGCCGCGAGCTACCAGAGTCACACGAGCCAGTGAACATGAATAA TTTCGAGGCCACTTTCGCAACATATCAGGCCAACATTCCCCGGTCATTCG ACTTATCGCAGCCTGAGTCGGGGGCGACTGCGCTGTCCCCAATCCCTCGA TTTCCCACGCTGGCGCTAACTCCCCCGGATGCTAGCGCAACGTCGGCGTC AAGCACGTCGTTGGCCGCGGGCTGCCGCTTTCCATGTCTCGAGCCCCTCC TTCCTCATCTGAAGAGTGTCTTGAGCCCAGAAGACGCTTGCAGTCTGCTC GAAACCTTCTTTACCGAGCCCGGTGAGTCCGCCGGATCCTCCCATAGCCC CTACGTTCTCTCCCCCGTGCTTCGAAGATCCGCGGTCTTGGATCCGATCA AGCCGCGGCCGACCTCTCCAGCGCTTCTGGCAACAATGCTTTGGTGTGCA GCGCACACGGCAAATGGGAGACTGTACTATATCCCAGGATCGCGGGCACG AATCGTTGATCACCTTTACTGCCTGGTGATGTCCTTACTGCAGCGCCTGG ACCCGGATAATTGGCGTCGCGTAAACGATGCTCGTCAGTGATCGCTGTAG AA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
Term | Definition |
GO:0005634 | nucleus |
Vocabulary: Biological Process
Term | Definition |
GO:0006351 | transcription, DNA-templated |
Vocabulary: Molecular Function
Term | Definition |
GO:0008270 | zinc ion binding |
GO:0003677 | DNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
Property Name | Value |
Note | antiSMASH:Cluster_11.10 |
DBxref | InterPro:IPR007219 |
DBxref | PFAM:PF04082 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
An11 | supercontig | An11:1544862..1547124 - |
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