|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at An11:1619127..1620476+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_007031-T1 ID=CBS51388_007031-T1|Name=CBS51388_007031-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1350bp|location=Sequence derived from alignment at An11:1619127..1620476+ (Aspergillus niger CBS 513.88)
ATGCCCCTCCCGGAGTCCAACCCCTCCATCCACGATGATTTCCTCCTTCC
GATGACTCCTCCAGATCCCTCCGAGGTCCCACTAATGGGAACCAAGGACA
CTGCGCCCGTGACTTCAGCCCTGCAGGTTATCGCGGCGGAGCGCGCCGCT
CTGGCGCATCTGGAGCATATCTACCAGACCGATCCGCTGGCACAAGATAA
CCTCGCGCGCGCGGTGGCTCAGATTGTGCGCACCATCAAGTATGGCGGGA
AATTGGTCTGCTGTGGTGTCGGCAAGAGTGGTAAGATTGCTCAGAAGCTT
GAAGCCACCATGAATAGTATGGGGATCTATAGTGCTTTTCTGCACCCCAC
GGAAGCCTTGCACGGCGACCTGGGCATGATACGACCGGTAAGGCTGTCCT
GACCTCAAGTCAAGGGAGAACCGCTTGCTGACTGAATTCGAATGCACCAG
CATGATACGCTATTGTTAATATCTTTCTCGGGCCGCACACCCGAGCTTCT
GCTCATGCTTCCTCATATCCCTTCAACTGTCACGGTCATCGCTATCACTT
CCCATATGGTCTCGTCGACTTGTCCTCTGCTTTCTTTCCACCCGTCAAAC
ATGGGGATCCTCTTACCGGCACCGATCCACGAGGATGAAGAGACCTCGAT
CGGAGTCTGTGCCCCGACTTCGTCCACCACGGTAGCCTTATCGCTGGGAG
ATGCACTGGCTATCGCTACGGCTCGGCGACTACATACAGCTCCTGGCAGA
GGCCCGGCGGAGATCTTCAAGGGCTTCCATCCTGGCGGGGCCATCGGCGC
TGCGTCCATAGCTTTGACACCTATGAGCATGTCATCTGCGTCAAGTTCCG
CCGCCCCATCAGACTATATTCCTGCTCAACAGACCGCGACCTCCTTCCCG
CAGTCAGACGACAAGCCTAATCAGCGTTCTCTCGTCCGTGATATGCTCGT
GTCCCTCGATCAGATTCCCAGGGTGTCTACTTCGGGTAAAGTCCGTCTTC
TAGACATTCTCCTCACTGCTATCCAGCACCCCAACGCCAAGTCATGGGTC
CATCTCTCACCATCCGAAATCGTGCCCCCACGGCATCTCCGCTTCGTCTC
CCAGAGCAACTATGTAGATATGCACGTTTCCGCCTTCACTGAGCTGGGTC
TACCTTTCGGTGTCTCCCGCAAGGATTGGTTCCGCCTCGCGAGCTCGAGC
ACCATCGACGACGCGCGACGGCTGGTTTCTGAGGCTGGTGCATCCTCAGG
CACCCCCGTGACAGTGGTGGCCGTCATGGACGAGACCAACCCTGACCATT
GTGTTGGTGTCATAGAAGCTGAGGATCTATGGAATGATTGTGATGACTAA
back to topCoding sequence (CDS) from alignment at An11:1619127..1620476+ >CBS51388_007031-T1 ID=CBS51388_007031-T1|Name=CBS51388_007031-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2574bp|location=Sequence derived from alignment at An11:1619127..1620476+ (Aspergillus niger CBS 513.88)
ATGCCCCTCCCGGAGTCCAACCCCTCCATCCACGATGATTTCCTCCTTCC
GATGACTCCTCCAGATCCCTCCGAGGTCCCACTAATGGGAACCAAGGACA
CTGCGCCCGTGACTTCAGCCCTGCAGGTTATCGCGGCGGAGCGCGCCGCT
CTGGCGCATCTGGAGCATATCTACCAGACCGATCCGCTGGCACAAGATAA
CCTCGCGCGCGCGGTGGCTCAGATTGTGCGCACCATCAAGTATGGCGGGA
AATTGGTCTGCTGTGGTGTCGGCAAGAGTGGTAAGATTGCTCAGAAGCTT
GAAGCCACCATGAATAGTATGGGGATCTATAGTGCTTTTCTGCACCCCAC
GGAAGCCTTGCACGGCGACCTGGGCATGATACGACCGCATGATACGCTAT
TGTTAATATCTTTCTCGGGCCGCACACCCGAGCTTCTGCTCATGCTTCCT
CATATCCCTTCAACTGTCACGGTCATCGCTATCACTTCCCATATGGTCTC
GTCGACTTGTCCTCTGCTTTCTTTCCACCCGTCAAACATGGGGATCCTCT
TACCGGCACCGATCCACGAGGATGAAGAGACCTCGATCGGAGTCTGTGCC
CCGACTTCGTCCACCACGGTAGCCTTATCGCTGGGAGATGCACTGGCTAT
CGCTACGGCTCGGCGACTACATACAGCTCCTGGCAGAGGCCCGGCGGAGA
TCTTCAAGGGCTTCCATCCTGGCGGGGCCATCGGCGCTGCGTCCATAGCT
TTGACACCTATGAGCATGTCATCTGCGTCAAGTTCCGCCGCCCCATCAGA
CTATATTCCTGCTCAACAGACCGCGACCTCCTTCCCGCAGTCAGACGACA
AGCCTAATCAGCGTTCTCTCGTCCGTGATATGCTCGTGTCCCTCGATCAG
ATTCCCAGGGTGTCTACTTCGGGTAAAGTCCGTCTTCTAGACATTCTCCT
CACTGCTATCCAGCACCCCAACGCCAAGTCATGGGTCCATCTCTCACCAT
CCGAAATCGTGCCCCCACGGCATCTCCGCTTCGTCTCCCAGAGCAACTAT
GTAGATATGCACGTTTCCGCCTTCACTGAGCTGGGTCTACCTTTCGGTGT
CTCCCGCAAGGATTGGTTCCGCCTCGCGAGCTCGAGCACCATCGACGACG
CGCGACGGCTGGTTTCTGAGGCTGGTGCATCCTCAGGCACCCCCGTGACA
GTGGTGGCCGTCATGGACGAGACCAACCCTGACCATTGTGTTGGTGTCAT
AGAAGCTGAGGATCTATGGAATGATTGTGATGACTAAATGCCCCTCCCGG
AGTCCAACCCCTCCATCCACGATGATTTCCTCCTTCCGATGACTCCTCCA
GATCCCTCCGAGGTCCCACTAATGGGAACCAAGGACACTGCGCCCGTGAC
TTCAGCCCTGCAGGTTATCGCGGCGGAGCGCGCCGCTCTGGCGCATCTGG
AGCATATCTACCAGACCGATCCGCTGGCACAAGATAACCTCGCGCGCGCG
GTGGCTCAGATTGTGCGCACCATCAAGTATGGCGGGAAATTGGTCTGCTG
TGGTGTCGGCAAGAGTGGTAAGATTGCTCAGAAGCTTGAAGCCACCATGA
ATAGTATGGGGATCTATAGTGCTTTTCTGCACCCCACGGAAGCCTTGCAC
GGCGACCTGGGCATGATACGACCGCATGATACGCTATTGTTAATATCTTT
CTCGGGCCGCACACCCGAGCTTCTGCTCATGCTTCCTCATATCCCTTCAA
CTGTCACGGTCATCGCTATCACTTCCCATATGGTCTCGTCGACTTGTCCT
CTGCTTTCTTTCCACCCGTCAAACATGGGGATCCTCTTACCGGCACCGAT
CCACGAGGATGAAGAGACCTCGATCGGAGTCTGTGCCCCGACTTCGTCCA
CCACGGTAGCCTTATCGCTGGGAGATGCACTGGCTATCGCTACGGCTCGG
CGACTACATACAGCTCCTGGCAGAGGCCCGGCGGAGATCTTCAAGGGCTT
CCATCCTGGCGGGGCCATCGGCGCTGCGTCCATAGCTTTGACACCTATGA
GCATGTCATCTGCGTCAAGTTCCGCCGCCCCATCAGACTATATTCCTGCT
CAACAGACCGCGACCTCCTTCCCGCAGTCAGACGACAAGCCTAATCAGCG
TTCTCTCGTCCGTGATATGCTCGTGTCCCTCGATCAGATTCCCAGGGTGT
CTACTTCGGGTAAAGTCCGTCTTCTAGACATTCTCCTCACTGCTATCCAG
CACCCCAACGCCAAGTCATGGGTCCATCTCTCACCATCCGAAATCGTGCC
CCCACGGCATCTCCGCTTCGTCTCCCAGAGCAACTATGTAGATATGCACG
TTTCCGCCTTCACTGAGCTGGGTCTACCTTTCGGTGTCTCCCGCAAGGAT
TGGTTCCGCCTCGCGAGCTCGAGCACCATCGACGACGCGCGACGGCTGGT
TTCTGAGGCTGGTGCATCCTCAGGCACCCCCGTGACAGTGGTGGCCGTCA
TGGACGAGACCAACCCTGACCATTGTGTTGGTGTCATAGAAGCTGAGGAT
CTATGGAATGATTGTGATGACTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:1901135 | carbohydrate derivative metabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0097367 | carbohydrate derivative binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR035474 |
| DBxref | InterPro:IPR001347 |
| DBxref | PFAM:PF01380 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An11 | supercontig | An11:1619127..1620476 + |
|
