You are here

CBS51388_007034-T1, CBS51388_007034-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_007034-T1
Unique NameCBS51388_007034-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An11:1631608..1632488-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_007034-T1 ID=CBS51388_007034-T1|Name=CBS51388_007034-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=881bp|location=Sequence derived from alignment at An11:1631608..1632488- (Aspergillus niger CBS 513.88)
ATGTCCCTCCCACGCACCTTCACCCGTCTCCTTACCAAACGACCACCCAC CCACCTCAACCCTTACACCCAAATCCGCACCATCAAAGCCGGCGCCGCCT CCTCGGCCATCGAATCCCCCTCCACCCTCCCCTCCTACCATGACCGTCTC GACCAGCCCCCAACTCAACCACCCTCTCAATCTCAACTCTCCGCAGCCGC AGAACATCTCATAACCACCCACCCGCTAGTCCAATCCCTCCGCTCGAACC CCTCCTACAAAGAGTCCCGTCCCCACCTACACATGAAACCCTCCCACCGG CCCAATCACTTCGTCGCGGGCACCCTCTCCGGCGCGAACAAGGTGACGGT GCCGCCGTATATGTTCACTTCCATTGTCAACCCAAACCGAACCCAGAAGC AGAATGATGAGGGGAAGGAGGTAAAGGAGTCCCCCCGCGCGCGCCTCATC TCCGTGTTCCACATCGGTCCTCAGCTGTGCGGACACCCCGGGTACGTTCA CGGAGGCTTGCTGAGCGTGATGTTCGACGAGGCGTTTGCGCGGTGCGTGT CGGATTCGTTTAAGAGCGGGTTGGGCATGACGGCGAACTTGAATGTGGAT TTCAGGAAGCCGGCGTTGCCGGAACGGGTGTATGTGCTCAAGGCGGAGAC GGTCAAGGTTGAGGGGAGGAAGGCGTGGGTGGAGGGAGAGATGAGGAGTA TGCCTGCTGATGGTGCTGAGGGAGAAGGGGAGACAGTAGTGGCGGAGGCG AGGGCGTTGTTTGTGGAGCCGAAGTTTGCGGAGGTGAGTTCTTTCTATTC TTTTCCCTGACGTGGTTTGTATGGGATGATGGCTAACTGATTGACGTTGT GTAGTCCATGGTGCCGCTGTATCGGAATTGA
back to top

Coding sequence (CDS) from alignment at An11:1631608..1632488-

>CBS51388_007034-T1 ID=CBS51388_007034-T1|Name=CBS51388_007034-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1620bp|location=Sequence derived from alignment at An11:1631608..1632488- (Aspergillus niger CBS 513.88)
TCCATGGTGCCGCTGTATCGGAATTGAATGTCCCTCCCACGCACCTTCAC
CCGTCTCCTTACCAAACGACCACCCACCCACCTCAACCCTTACACCCAAA
TCCGCACCATCAAAGCCGGCGCCGCCTCCTCGGCCATCGAATCCCCCTCC
ACCCTCCCCTCCTACCATGACCGTCTCGACCAGCCCCCAACTCAACCACC
CTCTCAATCTCAACTCTCCGCAGCCGCAGAACATCTCATAACCACCCACC
CGCTAGTCCAATCCCTCCGCTCGAACCCCTCCTACAAAGAGTCCCGTCCC
CACCTACACATGAAACCCTCCCACCGGCCCAATCACTTCGTCGCGGGCAC
CCTCTCCGGCGCGAACAAGGTGACGGTGCCGCCGTATATGTTCACTTCCA
TTGTCAACCCAAACCGAACCCAGAAGCAGAATGATGAGGGGAAGGAGGTA
AAGGAGTCCCCCCGCGCGCGCCTCATCTCCGTGTTCCACATCGGTCCTCA
GCTGTGCGGACACCCCGGGTACGTTCACGGAGGCTTGCTGAGCGTGATGT
TCGACGAGGCGTTTGCGCGGTGCGTGTCGGATTCGTTTAAGAGCGGGTTG
GGCATGACGGCGAACTTGAATGTGGATTTCAGGAAGCCGGCGTTGCCGGA
ACGGGTGTATGTGCTCAAGGCGGAGACGGTCAAGGTTGAGGGGAGGAAGG
CGTGGGTGGAGGGAGAGATGAGGAGTATGCCTGCTGATGGTGCTGAGGGA
GAAGGGGAGACAGTAGTGGCGGAGGCGAGGGCGTTGTTTGTGGAGCCGAA
GTTTGCGGAGTCCATGGTGCCGCTGTATCGGAATTGAATGTCCCTCCCAC
GCACCTTCACCCGTCTCCTTACCAAACGACCACCCACCCACCTCAACCCT
TACACCCAAATCCGCACCATCAAAGCCGGCGCCGCCTCCTCGGCCATCGA
ATCCCCCTCCACCCTCCCCTCCTACCATGACCGTCTCGACCAGCCCCCAA
CTCAACCACCCTCTCAATCTCAACTCTCCGCAGCCGCAGAACATCTCATA
ACCACCCACCCGCTAGTCCAATCCCTCCGCTCGAACCCCTCCTACAAAGA
GTCCCGTCCCCACCTACACATGAAACCCTCCCACCGGCCCAATCACTTCG
TCGCGGGCACCCTCTCCGGCGCGAACAAGGTGACGGTGCCGCCGTATATG
TTCACTTCCATTGTCAACCCAAACCGAACCCAGAAGCAGAATGATGAGGG
GAAGGAGGTAAAGGAGTCCCCCCGCGCGCGCCTCATCTCCGTGTTCCACA
TCGGTCCTCAGCTGTGCGGACACCCCGGGTACGTTCACGGAGGCTTGCTG
AGCGTGATGTTCGACGAGGCGTTTGCGCGGTGCGTGTCGGATTCGTTTAA
GAGCGGGTTGGGCATGACGGCGAACTTGAATGTGGATTTCAGGAAGCCGG
CGTTGCCGGAACGGGTGTATGTGCTCAAGGCGGAGACGGTCAAGGTTGAG
GGGAGGAAGGCGTGGGTGGAGGGAGAGATGAGGAGTATGCCTGCTGATGG
TGCTGAGGGAGAAGGGGAGACAGTAGTGGCGGAGGCGAGGGCGTTGTTTG
TGGAGCCGAAGTTTGCGGAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_007034CBS51388_007034Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007034-T1CBS51388_007034-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007034-T1.cdsCBS51388_007034-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007034-T1.exon2CBS51388_007034-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_007034-T1.exon1CBS51388_007034-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR029069
DBxrefInterPro:IPR006683
DBxrefPFAM:PF03061
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An11supercontigAn11:1631608..1632488 -