You are here

Home

CBS51388_007040-T1, CBS51388_007040-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_007040-T1
Unique NameCBS51388_007040-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An11:1648413..1649406-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_007040-T1 ID=CBS51388_007040-T1|Name=CBS51388_007040-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=994bp|location=Sequence derived from alignment at An11:1648413..1649406- (Aspergillus niger CBS 513.88)
ATGTCACGGAGATACGATTCCAGAGTATGCCTAATTCCCAATTCTGTCGT
TCCTTTGGAGCTTTAGCTGACCCGATGACGTCCTTCCACAGACTACCATC
TTTTCCCCCGAAGGTCGACTCTACCAGGTTGAATATGCGTTAGAAGCCAT
CTCGCATGCCGGTACCGCCTTGGGAATTCTGGCCAAGGATGGAATCGTCC
TCGCAGCGGAGAAGAAGGTCACCAGCAAGCTACTGGAGCAGGACACATCT
GCGGAGAAGCTATACACGCTGAACGAGTATGCATCACAAACCCCACCGAA
TCGCAGGTCTTTAACGAGATGGAAATCTAATCCTTGGGCAGCAACATGAT
CTGTGCTGTTGCTGGTATGACGGCAGACGCGAACATCCTTATCAACTATG
CCCGACAAGCTGCCCAGCGGTATCTCCTCACTTACAACGAAGAAATTCCT
TGCGAGCAACTTGTCCGTCGTCTGTGCGACTTGAAGCAAGGATACACCCA
GCATGGTGGTCTCCGTCCCTTCGGTGTATCGTTCATCTATGCCGGCTACG
ACCCTCTCCGAGAGTTCCAACTGTACCAGAGCAACCCCAGCGGTAACTAC
GGTGGCTGGAAAGCAACTAGCGTAGGAGCAAACAATGCTAGTGCTCAAAG
TCTGCTGAAGCAAGATTACAAGGAGGACTGCGACTTGAAGGAAGCTTGCG
CCATGGCTGTCAAGGTTCTGAGCAAGACCATGGACTCGACCAAGCTGAGT
AGTGAGAAGAGTAAGTCATGACTGATCCTTGTCCGTGGTTGTTCATACAC
GGGTACCACGCTATCTCGGCACCGTGACCTAGACTAATGTGCTGGCCCTT
ACAGTCGAGTTTGCTACGGTGGGAAGGACGCCGGAAGGCAAGATCTATCA
CCACCTGTGGAATGCTGATGAGATCAATGCTCTTTTGAAAGAACATGGGC
TGGCCAAGGTTGATGACGAGCCCGAGGCTGGCGAGATTAAATAA
back to top

Coding sequence (CDS) from alignment at An11:1648413..1649406-

>CBS51388_007040-T1 ID=CBS51388_007040-T1|Name=CBS51388_007040-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3072bp|location=Sequence derived from alignment at An11:1648413..1649406- (Aspergillus niger CBS 513.88)
TCGAGTTTGCTACGGTGGGAAGGACGCCGGAAGGCAAGATCTATCACCAC
CTGTGGAATGCTGATGAGATCAATGCTCTTTTGAAAGAACATGGGCTGGC
CAAGGTTGATGACGAGCCCGAGGCTGGCGAGATTAAATAACAACATGATC
TGTGCTGTTGCTGGTATGACGGCAGACGCGAACATCCTTATCAACTATGC
CCGACAAGCTGCCCAGCGGTATCTCCTCACTTACAACGAAGAAATTCCTT
GCGAGCAACTTGTCCGTCGTCTGTGCGACTTGAAGCAAGGATACACCCAG
CATGGTGGTCTCCGTCCCTTCGGTGTATCGTTCATCTATGCCGGCTACGA
CCCTCTCCGAGAGTTCCAACTGTACCAGAGCAACCCCAGCGGTAACTACG
GTGGCTGGAAAGCAACTAGCGTAGGAGCAAACAATGCTAGTGCTCAAAGT
CTGCTGAAGCAAGATTACAAGGAGGACTGCGACTTGAAGGAAGCTTGCGC
CATGGCTGTCAAGGTTCTGAGCAAGACCATGGACTCGACCAAGCTGAGTA
GTGAGAAGAACTACCATCTTTTCCCCCGAAGGTCGACTCTACCAGGTTGA
ATATGCGTTAGAAGCCATCTCGCATGCCGGTACCGCCTTGGGAATTCTGG
CCAAGGATGGAATCGTCCTCGCAGCGGAGAAGAAGGTCACCAGCAAGCTA
CTGGAGCAGGACACATCTGCGGAGAAGCTATACACGCTGAACGAATGTCA
CGGAGATACGATTCCAGATCGAGTTTGCTACGGTGGGAAGGACGCCGGAA
GGCAAGATCTATCACCACCTGTGGAATGCTGATGAGATCAATGCTCTTTT
GAAAGAACATGGGCTGGCCAAGGTTGATGACGAGCCCGAGGCTGGCGAGA
TTAAATAACAACATGATCTGTGCTGTTGCTGGTATGACGGCAGACGCGAA
CATCCTTATCAACTATGCCCGACAAGCTGCCCAGCGGTATCTCCTCACTT
ACAACGAAGAAATTCCTTGCGAGCAACTTGTCCGTCGTCTGTGCGACTTG
AAGCAAGGATACACCCAGCATGGTGGTCTCCGTCCCTTCGGTGTATCGTT
CATCTATGCCGGCTACGACCCTCTCCGAGAGTTCCAACTGTACCAGAGCA
ACCCCAGCGGTAACTACGGTGGCTGGAAAGCAACTAGCGTAGGAGCAAAC
AATGCTAGTGCTCAAAGTCTGCTGAAGCAAGATTACAAGGAGGACTGCGA
CTTGAAGGAAGCTTGCGCCATGGCTGTCAAGGTTCTGAGCAAGACCATGG
ACTCGACCAAGCTGAGTAGTGAGAAGAACTACCATCTTTTCCCCCGAAGG
TCGACTCTACCAGGTTGAATATGCGTTAGAAGCCATCTCGCATGCCGGTA
CCGCCTTGGGAATTCTGGCCAAGGATGGAATCGTCCTCGCAGCGGAGAAG
AAGGTCACCAGCAAGCTACTGGAGCAGGACACATCTGCGGAGAAGCTATA
CACGCTGAACGAATGTCACGGAGATACGATTCCAGATCGAGTTTGCTACG
GTGGGAAGGACGCCGGAAGGCAAGATCTATCACCACCTGTGGAATGCTGA
TGAGATCAATGCTCTTTTGAAAGAACATGGGCTGGCCAAGGTTGATGACG
AGCCCGAGGCTGGCGAGATTAAATAACAACATGATCTGTGCTGTTGCTGG
TATGACGGCAGACGCGAACATCCTTATCAACTATGCCCGACAAGCTGCCC
AGCGGTATCTCCTCACTTACAACGAAGAAATTCCTTGCGAGCAACTTGTC
CGTCGTCTGTGCGACTTGAAGCAAGGATACACCCAGCATGGTGGTCTCCG
TCCCTTCGGTGTATCGTTCATCTATGCCGGCTACGACCCTCTCCGAGAGT
TCCAACTGTACCAGAGCAACCCCAGCGGTAACTACGGTGGCTGGAAAGCA
ACTAGCGTAGGAGCAAACAATGCTAGTGCTCAAAGTCTGCTGAAGCAAGA
TTACAAGGAGGACTGCGACTTGAAGGAAGCTTGCGCCATGGCTGTCAAGG
TTCTGAGCAAGACCATGGACTCGACCAAGCTGAGTAGTGAGAAGAACTAC
CATCTTTTCCCCCGAAGGTCGACTCTACCAGGTTGAATATGCGTTAGAAG
CCATCTCGCATGCCGGTACCGCCTTGGGAATTCTGGCCAAGGATGGAATC
GTCCTCGCAGCGGAGAAGAAGGTCACCAGCAAGCTACTGGAGCAGGACAC
ATCTGCGGAGAAGCTATACACGCTGAACGAATGTCACGGAGATACGATTC
CAGATCGAGTTTGCTACGGTGGGAAGGACGCCGGAAGGCAAGATCTATCA
CCACCTGTGGAATGCTGATGAGATCAATGCTCTTTTGAAAGAACATGGGC
TGGCCAAGGTTGATGACGAGCCCGAGGCTGGCGAGATTAAATAACAACAT
GATCTGTGCTGTTGCTGGTATGACGGCAGACGCGAACATCCTTATCAACT
ATGCCCGACAAGCTGCCCAGCGGTATCTCCTCACTTACAACGAAGAAATT
CCTTGCGAGCAACTTGTCCGTCGTCTGTGCGACTTGAAGCAAGGATACAC
CCAGCATGGTGGTCTCCGTCCCTTCGGTGTATCGTTCATCTATGCCGGCT
ACGACCCTCTCCGAGAGTTCCAACTGTACCAGAGCAACCCCAGCGGTAAC
TACGGTGGCTGGAAAGCAACTAGCGTAGGAGCAAACAATGCTAGTGCTCA
AAGTCTGCTGAAGCAAGATTACAAGGAGGACTGCGACTTGAAGGAAGCTT
GCGCCATGGCTGTCAAGGTTCTGAGCAAGACCATGGACTCGACCAAGCTG
AGTAGTGAGAAGAACTACCATCTTTTCCCCCGAAGGTCGACTCTACCAGG
TTGAATATGCGTTAGAAGCCATCTCGCATGCCGGTACCGCCTTGGGAATT
CTGGCCAAGGATGGAATCGTCCTCGCAGCGGAGAAGAAGGTCACCAGCAA
GCTACTGGAGCAGGACACATCTGCGGAGAAGCTATACACGCTGAACGAAT
GTCACGGAGATACGATTCCAGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005839proteasome core complex
GO:0019773proteasome core complex, alpha-subunit complex
Vocabulary: Molecular Function
TermDefinition
GO:0004298threonine-type endopeptidase activity
GO:0004175endopeptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0051603proteolysis involved in cellular protein catabolic process
GO:0006511ubiquitin-dependent protein catabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_007040CBS51388_007040Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007040-T1CBS51388_007040-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007040-T1.cdsCBS51388_007040-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007040-T1.exon4CBS51388_007040-T1.exon4Aspergillus niger CBS 513.88exon
CBS51388_007040-T1.exon3CBS51388_007040-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_007040-T1.exon2CBS51388_007040-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_007040-T1.exon1CBS51388_007040-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
NoteMEROPS:MER0000554
DBxrefInterPro:IPR023332
DBxrefInterPro:IPR016050
DBxrefInterPro:IPR029055
DBxrefInterPro:IPR001353
DBxrefInterPro:IPR000426
DBxrefPFAM:PF10584
DBxrefPFAM:PF00227
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An11supercontigAn11:1648413..1649406 -
Powered by Drupal