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CBS51388_007041-T1, CBS51388_007041-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_007041-T1
Unique NameCBS51388_007041-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An11:1649781..1651556+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_007041-T1 ID=CBS51388_007041-T1|Name=CBS51388_007041-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1776bp|location=Sequence derived from alignment at An11:1649781..1651556+ (Aspergillus niger CBS 513.88)
ATGCTCAAATCTACGTATACCCCACCCCCTCCGTTACCTCCAGGGTGGAC
CGAACATAAAGCTCCTTCAGGTTTGGTTACCAGCTTCCCCGATATCCTCT
TAAAGTCGCTCTAATTAGACCCAGGTCATCTGTATTACTACAACTCGCAG
ACCAAGCAATCCACATATACAAGGCCTCAGGCCACTCCCGTACAACCTCC
GCCTGCACCTGCACCAGAACCCACGAATAACGCGCCATTCCTAACCCCAG
ATACACTTCCTCCCTTTTCTTCGACTCCTTATGCTCCTCATGGTTTTGGG
CATAGCGCTGCATCTCACGGGCCACCTTTCGATGGTCAGTCACGCGGAGG
CTTTCGCGGGGGCAGAGGATACCATGACCGCAAACCCCGTGGGCTACAGG
ATAGGCCTAAAACCAAACATGATATTCCTGGATGCGCGCCATGGATACTC
GTGAAGACGAAGCTGGGAAGGAGATTTGTTCACAACCCCGAAACGAACGA
AAGTTTTTGGAAGATCCCTCCAGAGGTACTGGTAGGAGTCCTTGAGTACG
ATCGCTTGGAGAGAGAGGCGAAGGAAAGGAAGGAGCGGGGCGAGGAGACG
GAAGATGTCGCCAAAGGAAAACCCGAAGCTCAGGAGTCGGATCAACCACG
GCGGGAAGAAGCAGAGAGTGGTGCCGCTACGGCAGCTGGGGAGGAGAGCG
ATGAGTATGAGGAGGTCGAAGTTACTGATAGCGAGGGTGAGGAAGAGCAA
CCTTTCAAACGACCGAGAACCGAAGAAGGGGACGAACAGCAGCCGATGGA
GTTCACTGAAGAAGATATGGAATATCAATTAGCGGCAATGGGCGAAGAAT
ATGGCCTTGACCCTGGCGAATACGGCGAACCCGGAGAAGAAGAATGGGAA
GAGGGCGCAGAAGGGCTTCCGCTCACGGAGGAGGATGCCACAGCCTTATT
CCGTGATCTTCTTGACGACTATCGCATTAACCCGTTCTCCACGTGGGAAA
AGATCATCGAAGAAGGTCGGATCATTGACGATAGCCGCTACACTGTGCTG
CCAAACATGAAAACGCGTCGTGAGGTCTGGTCCAACTGGAGTCGTGACCG
GATTCAAGAACTTAAAGAACGCAAAGAGAAGGAAGAAAAGAAGGACCCGC
GCATCAAGTACTTGGCCTTCCTCCAGGAACACGCCACACCAAAGTTGTAT
TGGCCCGAGTTCAAGCGCAAATACAAAAAGGAACCAGAAATGAAGGATAC
GCAATTGTCAGACAAAGATCGAGAAAAGTACTACCGCGACTTGATTTCTC
GATTGAAACAGTCAGAAAGCACGCGAAAGTCTGACCTTTCAGCGCTACTA
AAATCTGTACCACTGCACGAACTCAATCGGTCGTCTAATCTGGAGGCTCT
TCCTCCTTCCATCATCACCGATCTCAGATACATCGCCCTTATGCCCAAAG
TGCGGAATCCGCTTATCGAGGCTTACATCTCTACCTTGCCTGCTGCTCCG
GAAAGCGACATGACCGCCGAGGAAAGAGAAGAGCTAGAACGGAAGAAGGT
TGAACGTGATCGACGCGAAAAGGCGTTGGCAGAACGAGAGAAGCAGGTAC
AAGAGGAGAAGAGAAAGCAAAAAGGCGAGCTTGTTCGCGGTAAACACCTT
TTGAGAGAAGGGGAAGCGGAGATCGAGGAAGCTATGAGGATCAATAGAGG
AGGACTTCGCAGCTACATTGAAGCCGAAGATCAATCTTCAAAGGGCCAAG
GCGAGAACGCCAGTCAGCAGCCATGA
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Coding sequence (CDS) from alignment at An11:1649781..1651556+

>CBS51388_007041-T1 ID=CBS51388_007041-T1|Name=CBS51388_007041-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3444bp|location=Sequence derived from alignment at An11:1649781..1651556+ (Aspergillus niger CBS 513.88)
ATGCTCAAATCTACGTATACCCCACCCCCTCCGTTACCTCCAGGGTGGAC
CGAACATAAAGCTCCTTCAGGTCATCTGTATTACTACAACTCGCAGACCA
AGCAATCCACATATACAAGGCCTCAGGCCACTCCCGTACAACCTCCGCCT
GCACCTGCACCAGAACCCACGAATAACGCGCCATTCCTAACCCCAGATAC
ACTTCCTCCCTTTTCTTCGACTCCTTATGCTCCTCATGGTTTTGGGCATA
GCGCTGCATCTCACGGGCCACCTTTCGATGGTCAGTCACGCGGAGGCTTT
CGCGGGGGCAGAGGATACCATGACCGCAAACCCCGTGGGCTACAGGATAG
GCCTAAAACCAAACATGATATTCCTGGATGCGCGCCATGGATACTCGTGA
AGACGAAGCTGGGAAGGAGATTTGTTCACAACCCCGAAACGAACGAAAGT
TTTTGGAAGATCCCTCCAGAGGTACTGGTAGGAGTCCTTGAGTACGATCG
CTTGGAGAGAGAGGCGAAGGAAAGGAAGGAGCGGGGCGAGGAGACGGAAG
ATGTCGCCAAAGGAAAACCCGAAGCTCAGGAGTCGGATCAACCACGGCGG
GAAGAAGCAGAGAGTGGTGCCGCTACGGCAGCTGGGGAGGAGAGCGATGA
GTATGAGGAGGTCGAAGTTACTGATAGCGAGGGTGAGGAAGAGCAACCTT
TCAAACGACCGAGAACCGAAGAAGGGGACGAACAGCAGCCGATGGAGTTC
ACTGAAGAAGATATGGAATATCAATTAGCGGCAATGGGCGAAGAATATGG
CCTTGACCCTGGCGAATACGGCGAACCCGGAGAAGAAGAATGGGAAGAGG
GCGCAGAAGGGCTTCCGCTCACGGAGGAGGATGCCACAGCCTTATTCCGT
GATCTTCTTGACGACTATCGCATTAACCCGTTCTCCACGTGGGAAAAGAT
CATCGAAGAAGGTCGGATCATTGACGATAGCCGCTACACTGTGCTGCCAA
ACATGAAAACGCGTCGTGAGGTCTGGTCCAACTGGAGTCGTGACCGGATT
CAAGAACTTAAAGAACGCAAAGAGAAGGAAGAAAAGAAGGACCCGCGCAT
CAAGTACTTGGCCTTCCTCCAGGAACACGCCACACCAAAGTTGTATTGGC
CCGAGTTCAAGCGCAAATACAAAAAGGAACCAGAAATGAAGGATACGCAA
TTGTCAGACAAAGATCGAGAAAAGTACTACCGCGACTTGATTTCTCGATT
GAAACAGTCAGAAAGCACGCGAAAGTCTGACCTTTCAGCGCTACTAAAAT
CTGTACCACTGCACGAACTCAATCGGTCGTCTAATCTGGAGGCTCTTCCT
CCTTCCATCATCACCGATCTCAGATACATCGCCCTTATGCCCAAAGTGCG
GAATCCGCTTATCGAGGCTTACATCTCTACCTTGCCTGCTGCTCCGGAAA
GCGACATGACCGCCGAGGAAAGAGAAGAGCTAGAACGGAAGAAGGTTGAA
CGTGATCGACGCGAAAAGGCGTTGGCAGAACGAGAGAAGCAGGTACAAGA
GGAGAAGAGAAAGCAAAAAGGCGAGCTTGTTCGCGGTAAACACCTTTTGA
GAGAAGGGGAAGCGGAGATCGAGGAAGCTATGAGGATCAATAGAGGAGGA
CTTCGCAGCTACATTGAAGCCGAAGATCAATCTTCAAAGGGCCAAGGCGA
GAACGCCAGTCAGCAGCCATGAATGCTCAAATCTACGTATACCCCACCCC
CTCCGTTACCTCCAGGGTGGACCGAACATAAAGCTCCTTCAGGTCATCTG
TATTACTACAACTCGCAGACCAAGCAATCCACATATACAAGGCCTCAGGC
CACTCCCGTACAACCTCCGCCTGCACCTGCACCAGAACCCACGAATAACG
CGCCATTCCTAACCCCAGATACACTTCCTCCCTTTTCTTCGACTCCTTAT
GCTCCTCATGGTTTTGGGCATAGCGCTGCATCTCACGGGCCACCTTTCGA
TGGTCAGTCACGCGGAGGCTTTCGCGGGGGCAGAGGATACCATGACCGCA
AACCCCGTGGGCTACAGGATAGGCCTAAAACCAAACATGATATTCCTGGA
TGCGCGCCATGGATACTCGTGAAGACGAAGCTGGGAAGGAGATTTGTTCA
CAACCCCGAAACGAACGAAAGTTTTTGGAAGATCCCTCCAGAGGTACTGG
TAGGAGTCCTTGAGTACGATCGCTTGGAGAGAGAGGCGAAGGAAAGGAAG
GAGCGGGGCGAGGAGACGGAAGATGTCGCCAAAGGAAAACCCGAAGCTCA
GGAGTCGGATCAACCACGGCGGGAAGAAGCAGAGAGTGGTGCCGCTACGG
CAGCTGGGGAGGAGAGCGATGAGTATGAGGAGGTCGAAGTTACTGATAGC
GAGGGTGAGGAAGAGCAACCTTTCAAACGACCGAGAACCGAAGAAGGGGA
CGAACAGCAGCCGATGGAGTTCACTGAAGAAGATATGGAATATCAATTAG
CGGCAATGGGCGAAGAATATGGCCTTGACCCTGGCGAATACGGCGAACCC
GGAGAAGAAGAATGGGAAGAGGGCGCAGAAGGGCTTCCGCTCACGGAGGA
GGATGCCACAGCCTTATTCCGTGATCTTCTTGACGACTATCGCATTAACC
CGTTCTCCACGTGGGAAAAGATCATCGAAGAAGGTCGGATCATTGACGAT
AGCCGCTACACTGTGCTGCCAAACATGAAAACGCGTCGTGAGGTCTGGTC
CAACTGGAGTCGTGACCGGATTCAAGAACTTAAAGAACGCAAAGAGAAGG
AAGAAAAGAAGGACCCGCGCATCAAGTACTTGGCCTTCCTCCAGGAACAC
GCCACACCAAAGTTGTATTGGCCCGAGTTCAAGCGCAAATACAAAAAGGA
ACCAGAAATGAAGGATACGCAATTGTCAGACAAAGATCGAGAAAAGTACT
ACCGCGACTTGATTTCTCGATTGAAACAGTCAGAAAGCACGCGAAAGTCT
GACCTTTCAGCGCTACTAAAATCTGTACCACTGCACGAACTCAATCGGTC
GTCTAATCTGGAGGCTCTTCCTCCTTCCATCATCACCGATCTCAGATACA
TCGCCCTTATGCCCAAAGTGCGGAATCCGCTTATCGAGGCTTACATCTCT
ACCTTGCCTGCTGCTCCGGAAAGCGACATGACCGCCGAGGAAAGAGAAGA
GCTAGAACGGAAGAAGGTTGAACGTGATCGACGCGAAAAGGCGTTGGCAG
AACGAGAGAAGCAGGTACAAGAGGAGAAGAGAAAGCAAAAAGGCGAGCTT
GTTCGCGGTAAACACCTTTTGAGAGAAGGGGAAGCGGAGATCGAGGAAGC
TATGAGGATCAATAGAGGAGGACTTCGCAGCTACATTGAAGCCGAAGATC
AATCTTCAAAGGGCCAAGGCGAGAACGCCAGTCAGCAGCCATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_007041CBS51388_007041Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007041-T1.exon1CBS51388_007041-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_007041-T1.exon2CBS51388_007041-T1.exon2Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007041-T1.cdsCBS51388_007041-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007041-T1CBS51388_007041-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036020
DBxrefInterPro:IPR002713
DBxrefInterPro:IPR036517
DBxrefInterPro:IPR001202
DBxrefPFAM:PF00397
DBxrefPFAM:PF01846
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An11supercontigAn11:1649781..1651556 +
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