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CBS51388_007044-T1, CBS51388_007044-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_007044-T1
Unique NameCBS51388_007044-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An11:1657264..1658243-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_007044-T1 ID=CBS51388_007044-T1|Name=CBS51388_007044-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=980bp|location=Sequence derived from alignment at An11:1657264..1658243- (Aspergillus niger CBS 513.88)
ATGGCGGCGGAACAAAGAAAGCTGCTTGAGCAGCTCATGGGAGGTAAATT
GTCCAACCCCAGCTTCTACCAAGCTCTAAACAGCTAACCCAATTCTTTTT
CTCCAGCGGACCAGCTCATAGGTACCGGCGCTCCCTCTCGCAATGCGCAG
CTCCAAATCACCGATCCAAAAGTCTGTCGCTCGTATCTCGTCGGCACTTG
TCCGCATGACCTCTTCACCAATACCAAGCAAGACCTGGGCCCTTGTCAGA
AAGTTCACAGCGAAGGATTGAAGACGGAGTATGAGACCGCCTCGGCAGCT
GAGAAGGCCAAATGGGGATTCGATTACGACTATATGCGCGACATGCAGAA
ATACATCGATGATTGTGACCGACGTATCGATACCGCTCAGCGACGCTTGG
AAAAGACTCCGGACGAGATCAGGCAGACCAACAACTTGGTAAGGCATATA
CTCCAGCCCAACCACAGGACACCCCAAGTGGCCAAAAGAAGACTGGACTG
ATCATATTCTCAATAATATAGCTGAAGCAAATCTCCGACCTGACCAAAAC
CATCAACACGGGTCTCCTCGAGATCTCGGTGCTAGGCGAAACCGGCTCCG
TCGCACAGGCCCTGAACGAACTCCACAAGATCCGCACAGCCAAGCATCAA
AAGGAAACGTGTGAGCGAGAATTGAAGAACCTTCAAGATACCTCCGGACC
TTCAGGTCATCAGAAGCTGCAAGTGTGCGATGTCTGCGGCGCGTACCTGA
GTCGTCTCGATAACGATCGTCGGTTGGCGGACCATTTCTTCGGAAAGATG
CACATGGGATACTCGGACATGCGCAAGGGGTATAAGAAGCTCAGCGAGGA
GCTTAAGGGACGGCCTCCGCCGGTTCGTCACCACGATGACGATGATGGTG
GTTGGGGTGGACGCTCCGGTGGTGGACGTGGTCCTCGGTATGGCGGTGGT
GGTTACAAGAAGCGCGGTCCTCGCTGGTAA
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Coding sequence (CDS) from alignment at An11:1657264..1658243-

>CBS51388_007044-T1 ID=CBS51388_007044-T1|Name=CBS51388_007044-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2502bp|location=Sequence derived from alignment at An11:1657264..1658243- (Aspergillus niger CBS 513.88)
CTGAAGCAAATCTCCGACCTGACCAAAACCATCAACACGGGTCTCCTCGA
GATCTCGGTGCTAGGCGAAACCGGCTCCGTCGCACAGGCCCTGAACGAAC
TCCACAAGATCCGCACAGCCAAGCATCAAAAGGAAACGTGTGAGCGAGAA
TTGAAGAACCTTCAAGATACCTCCGGACCTTCAGGTCATCAGAAGCTGCA
AGTGTGCGATGTCTGCGGCGCGTACCTGAGTCGTCTCGATAACGATCGTC
GGTTGGCGGACCATTTCTTCGGAAAGATGCACATGGGATACTCGGACATG
CGCAAGGGGTATAAGAAGCTCAGCGAGGAGCTTAAGGGACGGCCTCCGCC
GGTTCGTCACCACGATGACGATGATGGTGGTTGGGGTGGACGCTCCGGTG
GTGGACGTGGTCCTCGGTATGGCGGTGGTGGTTACAAGAAGCGCGGTCCT
CGCTGGTAACGGACCAGCTCATAGGTACCGGCGCTCCCTCTCGCAATGCG
CAGCTCCAAATCACCGATCCAAAAGTCTGTCGCTCGTATCTCGTCGGCAC
TTGTCCGCATGACCTCTTCACCAATACCAAGCAAGACCTGGGCCCTTGTC
AGAAAGTTCACAGCGAAGGATTGAAGACGGAGTATGAGACCGCCTCGGCA
GCTGAGAAGGCCAAATGGGGATTCGATTACGACTATATGCGCGACATGCA
GAAATACATCGATGATTGTGACCGACGTATCGATACCGCTCAGCGACGCT
TGGAAAAGACTCCGGACGAGATCAGGCAGACCAACAACTTGATGGCGGCG
GAACAAAGAAAGCTGCTTGAGCAGCTCATGGGAGCTGAAGCAAATCTCCG
ACCTGACCAAAACCATCAACACGGGTCTCCTCGAGATCTCGGTGCTAGGC
GAAACCGGCTCCGTCGCACAGGCCCTGAACGAACTCCACAAGATCCGCAC
AGCCAAGCATCAAAAGGAAACGTGTGAGCGAGAATTGAAGAACCTTCAAG
ATACCTCCGGACCTTCAGGTCATCAGAAGCTGCAAGTGTGCGATGTCTGC
GGCGCGTACCTGAGTCGTCTCGATAACGATCGTCGGTTGGCGGACCATTT
CTTCGGAAAGATGCACATGGGATACTCGGACATGCGCAAGGGGTATAAGA
AGCTCAGCGAGGAGCTTAAGGGACGGCCTCCGCCGGTTCGTCACCACGAT
GACGATGATGGTGGTTGGGGTGGACGCTCCGGTGGTGGACGTGGTCCTCG
GTATGGCGGTGGTGGTTACAAGAAGCGCGGTCCTCGCTGGTAACGGACCA
GCTCATAGGTACCGGCGCTCCCTCTCGCAATGCGCAGCTCCAAATCACCG
ATCCAAAAGTCTGTCGCTCGTATCTCGTCGGCACTTGTCCGCATGACCTC
TTCACCAATACCAAGCAAGACCTGGGCCCTTGTCAGAAAGTTCACAGCGA
AGGATTGAAGACGGAGTATGAGACCGCCTCGGCAGCTGAGAAGGCCAAAT
GGGGATTCGATTACGACTATATGCGCGACATGCAGAAATACATCGATGAT
TGTGACCGACGTATCGATACCGCTCAGCGACGCTTGGAAAAGACTCCGGA
CGAGATCAGGCAGACCAACAACTTGATGGCGGCGGAACAAAGAAAGCTGC
TTGAGCAGCTCATGGGAGCTGAAGCAAATCTCCGACCTGACCAAAACCAT
CAACACGGGTCTCCTCGAGATCTCGGTGCTAGGCGAAACCGGCTCCGTCG
CACAGGCCCTGAACGAACTCCACAAGATCCGCACAGCCAAGCATCAAAAG
GAAACGTGTGAGCGAGAATTGAAGAACCTTCAAGATACCTCCGGACCTTC
AGGTCATCAGAAGCTGCAAGTGTGCGATGTCTGCGGCGCGTACCTGAGTC
GTCTCGATAACGATCGTCGGTTGGCGGACCATTTCTTCGGAAAGATGCAC
ATGGGATACTCGGACATGCGCAAGGGGTATAAGAAGCTCAGCGAGGAGCT
TAAGGGACGGCCTCCGCCGGTTCGTCACCACGATGACGATGATGGTGGTT
GGGGTGGACGCTCCGGTGGTGGACGTGGTCCTCGGTATGGCGGTGGTGGT
TACAAGAAGCGCGGTCCTCGCTGGTAACGGACCAGCTCATAGGTACCGGC
GCTCCCTCTCGCAATGCGCAGCTCCAAATCACCGATCCAAAAGTCTGTCG
CTCGTATCTCGTCGGCACTTGTCCGCATGACCTCTTCACCAATACCAAGC
AAGACCTGGGCCCTTGTCAGAAAGTTCACAGCGAAGGATTGAAGACGGAG
TATGAGACCGCCTCGGCAGCTGAGAAGGCCAAATGGGGATTCGATTACGA
CTATATGCGCGACATGCAGAAATACATCGATGATTGTGACCGACGTATCG
ATACCGCTCAGCGACGCTTGGAAAAGACTCCGGACGAGATCAGGCAGACC
AACAACTTGATGGCGGCGGAACAAAGAAAGCTGCTTGAGCAGCTCATGGG
AG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005685U1 snRNP
Vocabulary: Biological Process
TermDefinition
GO:0006376mRNA splice site selection
Vocabulary: Molecular Function
TermDefinition
GO:0003729mRNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_007044CBS51388_007044Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007044-T1CBS51388_007044-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007044-T1.cdsCBS51388_007044-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007044-T1.exon3CBS51388_007044-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_007044-T1.exon2CBS51388_007044-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_007044-T1.exon1CBS51388_007044-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
NoteBUSCO:EOG09264D7Y
DBxrefInterPro:IPR004882
DBxrefPFAM:PF03194
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An11supercontigAn11:1657264..1658243 -
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