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CBS51388_007049-T1, CBS51388_007049-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_007049-T1
Unique NameCBS51388_007049-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An11:1666607..1667502+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_007049-T1 ID=CBS51388_007049-T1|Name=CBS51388_007049-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=896bp|location=Sequence derived from alignment at An11:1666607..1667502+ (Aspergillus niger CBS 513.88)
ATGTCATGTTACTTGTCTCAGAGCTGCTTTAGGCAGCTTGCGCGGAGTCC
TTTGAGACAAGGACCTCTGCCCAACTTCCTCGTCCCCGCTTTCTCTCACC
CTCTTCGGACACAACCTTTCTCGACCACGTCCCCAGTACAATCGCGAGTT
GGCGGCGCCGCGATCACCGTGCCCCCGGAGGTGTCTCTGAAGTTCATCGA
CCTCCCTCAGCCTAAGACCAAGGCCAAGTCGGTTGACTTCCCTAACATGG
CCGTTGAGGTCAAAGGACCCCTGGGTAAGGAACAATGGCAACAATTCATA
ACAGCGGCGTCGGAAAGCGGAGCGAGACTGACATCTGAGTGCTAGGTGAA
TTGTCGCTGAACATCCCTTCCTACGTGAAAATCGACTACGATGAAGCCCT
TCGGAAAGCCACTCTGGCTGTTCAAGACTCAGAGATCACTCACCAGCGTG
CTATGTGGGGTGCGTAACTCCGTTGGAATTAAGTTTACTGTTGAATTATA
GTTGACGGGAGATTGTCTCTAGGAACCATGCGCGCCCACCTACAGAACCA
CATCCTCGGAGTGTCAGAAGGTCACATTTGCATTCTGAGTTTCGTTGGTG
TTGGTTACAGAGCTAGCATCGAACCCACGGCGACCACCGTTGAGCCCCAA
TACCCCGGTCAACAGTTCGTGTCCCTGAAGGTTGGATACTCGCACCCGAT
TGAGCTGGGTATTCCCCAGGGCGTCAAGGCCAGCACACCCCAGCCGACTC
GTATCCTGTTGGAGAGTGTGGACAAGCAGCTTGTGACCAAGTTCGCGGCG
GAGATCCGCGAATGGCGCAAGCCGGAACCTTACAAGGGCAAGGGTATCTT
CGTCAACGGGGAGACGATCAAGCTCAAGGACAAGAAGATTCGGTGA
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Coding sequence (CDS) from alignment at An11:1666607..1667502+

>CBS51388_007049-T1 ID=CBS51388_007049-T1|Name=CBS51388_007049-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2286bp|location=Sequence derived from alignment at An11:1666607..1667502+ (Aspergillus niger CBS 513.88)
ATGTCATGTTACTTGTCTCAGAGCTGCTTTAGGCAGCTTGCGCGGAGTCC
TTTGAGACAAGGACCTCTGCCCAACTTCCTCGTCCCCGCTTTCTCTCACC
CTCTTCGGACACAACCTTTCTCGACCACGTCCCCAGTACAATCGCGAGTT
GGCGGCGCCGCGATCACCGTGCCCCCGGAGGTGTCTCTGAAGTTCATCGA
CCTCCCTCAGCCTAAGACCAAGGCCAAGTCGGTTGACTTCCCTAACATGG
CCGTTGAGGTCAAAGGACCCCTGGGTGAATTGTCGCTGAACATCCCTTCC
TACGTGAAAATCGACTACGATGAAGCCCTTCGGAAAGCCACTCTGGCTGT
TCAAGACTCAGAGATCACTCACCAGCGTGCTATGTGGGGAACCATGCGCG
CCCACCTACAGAACCACATCCTCGGAGTGTCAGAAGGTCACATTTGCATT
CTGAGTTTCGTTGGTGTTGGTTACAGAGCTAGCATCGAACCCACGGCGAC
CACCGTTGAGCCCCAATACCCCGGTCAACAGTTCGTGTCCCTGAAGGTTG
GATACTCGCACCCGATTGAGCTGGGTATTCCCCAGGGCGTCAAGGCCAGC
ACACCCCAGCCGACTCGTATCCTGTTGGAGAGTGTGGACAAGCAGCTTGT
GACCAAGTTCGCGGCGGAGATCCGCGAATGGCGCAAGCCGGAACCTTACA
AGGGCAAGGGTATCTTCGTCAACGGGGAGACGATCAAGCTCAAGGACAAG
AAGATTCGGTGAATGTCATGTTACTTGTCTCAGAGCTGCTTTAGGCAGCT
TGCGCGGAGTCCTTTGAGACAAGGACCTCTGCCCAACTTCCTCGTCCCCG
CTTTCTCTCACCCTCTTCGGACACAACCTTTCTCGACCACGTCCCCAGTA
CAATCGCGAGTTGGCGGCGCCGCGATCACCGTGCCCCCGGAGGTGTCTCT
GAAGTTCATCGACCTCCCTCAGCCTAAGACCAAGGCCAAGTCGGTTGACT
TCCCTAACATGGCCGTTGAGGTCAAAGGACCCCTGGGTGAATTGTCGCTG
AACATCCCTTCCTACGTGAAAATCGACTACGATGAAGCCCTTCGGAAAGC
CACTCTGGCTGTTCAAGACTCAGAGATCACTCACCAGCGTGCTATGTGGG
GAACCATGCGCGCCCACCTACAGAACCACATCCTCGGAGTGTCAGAAGGT
CACATTTGCATTCTGAGTTTCGTTGGTGTTGGTTACAGAGCTAGCATCGA
ACCCACGGCGACCACCGTTGAGCCCCAATACCCCGGTCAACAGTTCGTGT
CCCTGAAGGTTGGATACTCGCACCCGATTGAGCTGGGTATTCCCCAGGGC
GTCAAGGCCAGCACACCCCAGCCGACTCGTATCCTGTTGGAGAGTGTGGA
CAAGCAGCTTGTGACCAAGTTCGCGGCGGAGATCCGCGAATGGCGCAAGC
CGGAACCTTACAAGGGCAAGGGTATCTTCGTCAACGGGGAGACGATCAAG
CTCAAGGACAAGAAGATTCGGTGAATGTCATGTTACTTGTCTCAGAGCTG
CTTTAGGCAGCTTGCGCGGAGTCCTTTGAGACAAGGACCTCTGCCCAACT
TCCTCGTCCCCGCTTTCTCTCACCCTCTTCGGACACAACCTTTCTCGACC
ACGTCCCCAGTACAATCGCGAGTTGGCGGCGCCGCGATCACCGTGCCCCC
GGAGGTGTCTCTGAAGTTCATCGACCTCCCTCAGCCTAAGACCAAGGCCA
AGTCGGTTGACTTCCCTAACATGGCCGTTGAGGTCAAAGGACCCCTGGGT
GAATTGTCGCTGAACATCCCTTCCTACGTGAAAATCGACTACGATGAAGC
CCTTCGGAAAGCCACTCTGGCTGTTCAAGACTCAGAGATCACTCACCAGC
GTGCTATGTGGGGAACCATGCGCGCCCACCTACAGAACCACATCCTCGGA
GTGTCAGAAGGTCACATTTGCATTCTGAGTTTCGTTGGTGTTGGTTACAG
AGCTAGCATCGAACCCACGGCGACCACCGTTGAGCCCCAATACCCCGGTC
AACAGTTCGTGTCCCTGAAGGTTGGATACTCGCACCCGATTGAGCTGGGT
ATTCCCCAGGGCGTCAAGGCCAGCACACCCCAGCCGACTCGTATCCTGTT
GGAGAGTGTGGACAAGCAGCTTGTGACCAAGTTCGCGGCGGAGATCCGCG
AATGGCGCAAGCCGGAACCTTACAAGGGCAAGGGTATCTTCGTCAACGGG
GAGACGATCAAGCTCAAGGACAAGAAGATTCGGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0019843rRNA binding
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_007049CBS51388_007049Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007049-T1.exon1CBS51388_007049-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_007049-T1.exon2CBS51388_007049-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_007049-T1.exon3CBS51388_007049-T1.exon3Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007049-T1.cdsCBS51388_007049-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007049-T1CBS51388_007049-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR002358
DBxrefInterPro:IPR020040
DBxrefInterPro:IPR036789
DBxrefInterPro:IPR019906
DBxrefPFAM:PF00347
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An11supercontigAn11:1666607..1667502 +
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