You are here

Home

CBS51388_007055-T1, CBS51388_007055-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_007055-T1
Unique NameCBS51388_007055-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An11:1679947..1681014-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_007055-T1 ID=CBS51388_007055-T1|Name=CBS51388_007055-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1068bp|location=Sequence derived from alignment at An11:1679947..1681014- (Aspergillus niger CBS 513.88)
ATGTTCGACCTCCCCAGCGCAAAGCGGTACGTCAAACACACCAACCTACT
AGCCTCAATACCAACTTCAATCCCACTAACCAACGCCCCAACCACAGCGT
CCGTCGCGAAGAACTCCTATCCCGAACATCCACCTCGCCCTCCCCCTCTC
CACCCCCAGAATCCTCCCTCACAGACGTCCACCAACGTCTCGGCGCCCTC
CTAGACATCGACGCCCTCCTCGCGCCACAACCCGACCCATCTCCGCAACC
AACAACCGAAGCCAACCCCGACGAAGACGAAGAACAAGAGTTCGAATTCC
GACTGTTCAGCGCCCCTGCGAAATCCGAATCTAAAAAGGAAGAGCAAGCA
GCTGTCGAGTCCAGCACAACTCAAGCCCAGAAATTACGCATCCGGGTACG
CTCACCCACGCCCGGCGCAGTGGGAGTGGAAGATGGACGCTTTGTGAATC
CGTTTCGCGGATGGGGGTACTATTTCTCTGCGCCGGGGGCGATGGCTGGG
GTTAAGGAGGATGAGTTACGGCTGGAAGAGGAGAGGTTGAGGGAGAAGAG
GAGACAGTTTGAGGACGTGGCTGTTTCGGGGTTGCAGGTGGTAGGGTTTG
CTGGTGTGGAGTGGGTAAGTCTACTTTTTTTCTTACTATCTTGAGCTCTA
TTGGGATGGTTGAGTGGATGTTTTGCTGACACTTTCTGCGCTCTAGCCTG
GGTGTCATCTTCCGTGGAGGGTTGTGACGCTGAAGAGTGAGAAGAAGGGT
AAGGGTGCGGCGGTGACGTGCGCGAAGGACCCTGCGGAGAGGGCGCCGAC
GTCTTTGAAGAAGCCGGGCAAGAAACGCCGGATTCAGTTGCGGAAGCGGG
TCTCGGCTGCGGATGAGAGAAAGAAGAAAGAGGAGGAGAAGAAGTTGTTG
GAGGCGGAGAAGCGGAATCGGAAGAATCGCGAGAAGAAGATCAAGCGGAG
GCAGAAGGCGAGAGAGGAGAAGGCTGCTAAGGCCGCCGCTGCTGCTGCGG
CTGGTGGTGGTGAGGCTCCGGCTGGTCAGATGGATGTGGATGTGTCTTCG
GATGAGGGCAGCGATTGA
back to top

Coding sequence (CDS) from alignment at An11:1679947..1681014-

>CBS51388_007055-T1 ID=CBS51388_007055-T1|Name=CBS51388_007055-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2745bp|location=Sequence derived from alignment at An11:1679947..1681014- (Aspergillus niger CBS 513.88)
CCTGGGTGTCATCTTCCGTGGAGGGTTGTGACGCTGAAGAGTGAGAAGAA
GGGTAAGGGTGCGGCGGTGACGTGCGCGAAGGACCCTGCGGAGAGGGCGC
CGACGTCTTTGAAGAAGCCGGGCAAGAAACGCCGGATTCAGTTGCGGAAG
CGGGTCTCGGCTGCGGATGAGAGAAAGAAGAAAGAGGAGGAGAAGAAGTT
GTTGGAGGCGGAGAAGCGGAATCGGAAGAATCGCGAGAAGAAGATCAAGC
GGAGGCAGAAGGCGAGAGAGGAGAAGGCTGCTAAGGCCGCCGCTGCTGCT
GCGGCTGGTGGTGGTGAGGCTCCGGCTGGTCAGATGGATGTGGATGTGTC
TTCGGATGAGGGCAGCGATTGACGTCCGTCGCGAAGAACTCCTATCCCGA
ACATCCACCTCGCCCTCCCCCTCTCCACCCCCAGAATCCTCCCTCACAGA
CGTCCACCAACGTCTCGGCGCCCTCCTAGACATCGACGCCCTCCTCGCGC
CACAACCCGACCCATCTCCGCAACCAACAACCGAAGCCAACCCCGACGAA
GACGAAGAACAAGAGTTCGAATTCCGACTGTTCAGCGCCCCTGCGAAATC
CGAATCTAAAAAGGAAGAGCAAGCAGCTGTCGAGTCCAGCACAACTCAAG
CCCAGAAATTACGCATCCGGGTACGCTCACCCACGCCCGGCGCAGTGGGA
GTGGAAGATGGACGCTTTGTGAATCCGTTTCGCGGATGGGGGTACTATTT
CTCTGCGCCGGGGGCGATGGCTGGGGTTAAGGAGGATGAGTTACGGCTGG
AAGAGGAGAGGTTGAGGGAGAAGAGGAGACAGTTTGAGGACGTGGCTGTT
TCGGGGTTGCAGGTGGTAGGGTTTGCTGGTGTGGAGTGGATGTTCGACCT
CCCCAGCGCAAAGCGCCTGGGTGTCATCTTCCGTGGAGGGTTGTGACGCT
GAAGAGTGAGAAGAAGGGTAAGGGTGCGGCGGTGACGTGCGCGAAGGACC
CTGCGGAGAGGGCGCCGACGTCTTTGAAGAAGCCGGGCAAGAAACGCCGG
ATTCAGTTGCGGAAGCGGGTCTCGGCTGCGGATGAGAGAAAGAAGAAAGA
GGAGGAGAAGAAGTTGTTGGAGGCGGAGAAGCGGAATCGGAAGAATCGCG
AGAAGAAGATCAAGCGGAGGCAGAAGGCGAGAGAGGAGAAGGCTGCTAAG
GCCGCCGCTGCTGCTGCGGCTGGTGGTGGTGAGGCTCCGGCTGGTCAGAT
GGATGTGGATGTGTCTTCGGATGAGGGCAGCGATTGACGTCCGTCGCGAA
GAACTCCTATCCCGAACATCCACCTCGCCCTCCCCCTCTCCACCCCCAGA
ATCCTCCCTCACAGACGTCCACCAACGTCTCGGCGCCCTCCTAGACATCG
ACGCCCTCCTCGCGCCACAACCCGACCCATCTCCGCAACCAACAACCGAA
GCCAACCCCGACGAAGACGAAGAACAAGAGTTCGAATTCCGACTGTTCAG
CGCCCCTGCGAAATCCGAATCTAAAAAGGAAGAGCAAGCAGCTGTCGAGT
CCAGCACAACTCAAGCCCAGAAATTACGCATCCGGGTACGCTCACCCACG
CCCGGCGCAGTGGGAGTGGAAGATGGACGCTTTGTGAATCCGTTTCGCGG
ATGGGGGTACTATTTCTCTGCGCCGGGGGCGATGGCTGGGGTTAAGGAGG
ATGAGTTACGGCTGGAAGAGGAGAGGTTGAGGGAGAAGAGGAGACAGTTT
GAGGACGTGGCTGTTTCGGGGTTGCAGGTGGTAGGGTTTGCTGGTGTGGA
GTGGATGTTCGACCTCCCCAGCGCAAAGCGCCTGGGTGTCATCTTCCGTG
GAGGGTTGTGACGCTGAAGAGTGAGAAGAAGGGTAAGGGTGCGGCGGTGA
CGTGCGCGAAGGACCCTGCGGAGAGGGCGCCGACGTCTTTGAAGAAGCCG
GGCAAGAAACGCCGGATTCAGTTGCGGAAGCGGGTCTCGGCTGCGGATGA
GAGAAAGAAGAAAGAGGAGGAGAAGAAGTTGTTGGAGGCGGAGAAGCGGA
ATCGGAAGAATCGCGAGAAGAAGATCAAGCGGAGGCAGAAGGCGAGAGAG
GAGAAGGCTGCTAAGGCCGCCGCTGCTGCTGCGGCTGGTGGTGGTGAGGC
TCCGGCTGGTCAGATGGATGTGGATGTGTCTTCGGATGAGGGCAGCGATT
GACGTCCGTCGCGAAGAACTCCTATCCCGAACATCCACCTCGCCCTCCCC
CTCTCCACCCCCAGAATCCTCCCTCACAGACGTCCACCAACGTCTCGGCG
CCCTCCTAGACATCGACGCCCTCCTCGCGCCACAACCCGACCCATCTCCG
CAACCAACAACCGAAGCCAACCCCGACGAAGACGAAGAACAAGAGTTCGA
ATTCCGACTGTTCAGCGCCCCTGCGAAATCCGAATCTAAAAAGGAAGAGC
AAGCAGCTGTCGAGTCCAGCACAACTCAAGCCCAGAAATTACGCATCCGG
GTACGCTCACCCACGCCCGGCGCAGTGGGAGTGGAAGATGGACGCTTTGT
GAATCCGTTTCGCGGATGGGGGTACTATTTCTCTGCGCCGGGGGCGATGG
CTGGGGTTAAGGAGGATGAGTTACGGCTGGAAGAGGAGAGGTTGAGGGAG
AAGAGGAGACAGTTTGAGGACGTGGCTGTTTCGGGGTTGCAGGTGGTAGG
GTTTGCTGGTGTGGAGTGGATGTTCGACCTCCCCAGCGCAAAGCG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_007055CBS51388_007055Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007055-T1CBS51388_007055-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007055-T1.cdsCBS51388_007055-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007055-T1.exon3CBS51388_007055-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_007055-T1.exon2CBS51388_007055-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_007055-T1.exon1CBS51388_007055-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR018555
DBxrefPFAM:PF09428
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An11supercontigAn11:1679947..1681014 -
Powered by Drupal