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CBS51388_007056-T1, CBS51388_007056-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_007056-T1
Unique NameCBS51388_007056-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An11:1682062..1682789+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_007056-T1 ID=CBS51388_007056-T1|Name=CBS51388_007056-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=728bp|location=Sequence derived from alignment at An11:1682062..1682789+ (Aspergillus niger CBS 513.88)
ATGGGTATCTGCGCCTCATGTCTAGGACGTAATCGTCAGGAACCCCACGA TGTAAGTTCAATCCTATATTCCTTTGCCGGAAAAAAGGCGCACGCAACCA ACACTCCTCCCTCCCTTTGCGCCCGACTCCACCAACCCTCTTCGCATCCA TCATTTAGATGCCAAAACTAACTTATCTCTATCACCACAGCCCAACCACC CCGAATCTTCCCGCCTCCTCGATGAAGACATCTACCAACCGGGCTACGGT TACGGCGCCCTCCACCAAAGCACCCAAGGCAATCACCCAGACCCCAGCTA CCTGAAGCGCGAACGAGAAGCCCTCGAAGCAATCTGTCAGCGGACATCAG AGTGAGCCACCCTTCACCACCAGTATGACAGAGATAGAGTATAGTCCAAT ACTGATAACGTGCAACAGTTCCGTTATCGACATCTGGTCCCTCCAACCCC AACCGCATCTCCAACCTCGCGCCACCCTCCCCAGCACTGTCCCCCCTCCT TCATCCTCCGATGGCGATGCGCCGCCCGTGAAAGTAATAACAACCGACTC GACACCGGCCCGTTCAAAGAAACATTCCTCTCCGGCTGCGAAGGCGGGCG GCACGGTCCCGAAACATTGGGGTGAGGTGGTGATAAATACGCGCAAGAAT CGGTCGCGGCCTGGGTCGAGTACGGACGAAGACGGTGCTGCTAAGAGAGA TGTGTTTGGAGTGTTGAAGGTTACATGA
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Coding sequence (CDS) from alignment at An11:1682062..1682789+

>CBS51388_007056-T1 ID=CBS51388_007056-T1|Name=CBS51388_007056-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1566bp|location=Sequence derived from alignment at An11:1682062..1682789+ (Aspergillus niger CBS 513.88)
ATGGGTATCTGCGCCTCATGTCTAGGACGTAATCGTCAGGAACCCCACGA
TCCCAACCACCCCGAATCTTCCCGCCTCCTCGATGAAGACATCTACCAAC
CGGGCTACGGTTACGGCGCCCTCCACCAAAGCACCCAAGGCAATCACCCA
GACCCCAGCTACCTGAAGCGCGAACGAGAAGCCCTCGAAGCAATCTGTCA
GCGGACATCAGATTCCGTTATCGACATCTGGTCCCTCCAACCCCAACCGC
ATCTCCAACCTCGCGCCACCCTCCCCAGCACTGTCCCCCCTCCTTCATCC
TCCGATGGCGATGCGCCGCCCGTGAAAGTAATAACAACCGACTCGACACC
GGCCCGTTCAAAGAAACATTCCTCTCCGGCTGCGAAGGCGGGCGGCACGG
TCCCGAAACATTGGGGTGAGGTGGTGATAAATACGCGCAAGAATCGGTCG
CGGCCTGGGTCGAGTACGGACGAAGACGGTGCTGCTAAGAGAGATGTGTT
TGGAGTGTTGAAGGTTACATGAATGGGTATCTGCGCCTCATGTCTAGGAC
GTAATCGTCAGGAACCCCACGATCCCAACCACCCCGAATCTTCCCGCCTC
CTCGATGAAGACATCTACCAACCGGGCTACGGTTACGGCGCCCTCCACCA
AAGCACCCAAGGCAATCACCCAGACCCCAGCTACCTGAAGCGCGAACGAG
AAGCCCTCGAAGCAATCTGTCAGCGGACATCAGATTCCGTTATCGACATC
TGGTCCCTCCAACCCCAACCGCATCTCCAACCTCGCGCCACCCTCCCCAG
CACTGTCCCCCCTCCTTCATCCTCCGATGGCGATGCGCCGCCCGTGAAAG
TAATAACAACCGACTCGACACCGGCCCGTTCAAAGAAACATTCCTCTCCG
GCTGCGAAGGCGGGCGGCACGGTCCCGAAACATTGGGGTGAGGTGGTGAT
AAATACGCGCAAGAATCGGTCGCGGCCTGGGTCGAGTACGGACGAAGACG
GTGCTGCTAAGAGAGATGTGTTTGGAGTGTTGAAGGTTACATGAATGGGT
ATCTGCGCCTCATGTCTAGGACGTAATCGTCAGGAACCCCACGATCCCAA
CCACCCCGAATCTTCCCGCCTCCTCGATGAAGACATCTACCAACCGGGCT
ACGGTTACGGCGCCCTCCACCAAAGCACCCAAGGCAATCACCCAGACCCC
AGCTACCTGAAGCGCGAACGAGAAGCCCTCGAAGCAATCTGTCAGCGGAC
ATCAGATTCCGTTATCGACATCTGGTCCCTCCAACCCCAACCGCATCTCC
AACCTCGCGCCACCCTCCCCAGCACTGTCCCCCCTCCTTCATCCTCCGAT
GGCGATGCGCCGCCCGTGAAAGTAATAACAACCGACTCGACACCGGCCCG
TTCAAAGAAACATTCCTCTCCGGCTGCGAAGGCGGGCGGCACGGTCCCGA
AACATTGGGGTGAGGTGGTGATAAATACGCGCAAGAATCGGTCGCGGCCT
GGGTCGAGTACGGACGAAGACGGTGCTGCTAAGAGAGATGTGTTTGGAGT
GTTGAAGGTTACATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0071986Ragulator complex
GO:0031902late endosome membrane
GO:0045121membrane raft
Vocabulary: Biological Process
TermDefinition
GO:0032008positive regulation of TOR signaling
GO:0007040lysosome organization
GO:0071230cellular response to amino acid stimulus
GO:0016197endosomal transport
GO:0043410positive regulation of MAPK cascade
GO:0042632cholesterol homeostasis
GO:0001919regulation of receptor recycling
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_007056CBS51388_007056Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007056-T1.exon1CBS51388_007056-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_007056-T1.exon2CBS51388_007056-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_007056-T1.exon3CBS51388_007056-T1.exon3Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007056-T1.cdsCBS51388_007056-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007056-T1CBS51388_007056-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR028209
DBxrefPFAM:PF15454
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An11supercontigAn11:1682062..1682789 +