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Sequences
The following sequences are available for this feature:
mRNA from alignment at An11:1682062..1682789+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_007056-T1 ID=CBS51388_007056-T1|Name=CBS51388_007056-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=728bp|location=Sequence derived from alignment at An11:1682062..1682789+ (Aspergillus niger CBS 513.88)
ATGGGTATCTGCGCCTCATGTCTAGGACGTAATCGTCAGGAACCCCACGA
TGTAAGTTCAATCCTATATTCCTTTGCCGGAAAAAAGGCGCACGCAACCA
ACACTCCTCCCTCCCTTTGCGCCCGACTCCACCAACCCTCTTCGCATCCA
TCATTTAGATGCCAAAACTAACTTATCTCTATCACCACAGCCCAACCACC
CCGAATCTTCCCGCCTCCTCGATGAAGACATCTACCAACCGGGCTACGGT
TACGGCGCCCTCCACCAAAGCACCCAAGGCAATCACCCAGACCCCAGCTA
CCTGAAGCGCGAACGAGAAGCCCTCGAAGCAATCTGTCAGCGGACATCAG
AGTGAGCCACCCTTCACCACCAGTATGACAGAGATAGAGTATAGTCCAAT
ACTGATAACGTGCAACAGTTCCGTTATCGACATCTGGTCCCTCCAACCCC
AACCGCATCTCCAACCTCGCGCCACCCTCCCCAGCACTGTCCCCCCTCCT
TCATCCTCCGATGGCGATGCGCCGCCCGTGAAAGTAATAACAACCGACTC
GACACCGGCCCGTTCAAAGAAACATTCCTCTCCGGCTGCGAAGGCGGGCG
GCACGGTCCCGAAACATTGGGGTGAGGTGGTGATAAATACGCGCAAGAAT
CGGTCGCGGCCTGGGTCGAGTACGGACGAAGACGGTGCTGCTAAGAGAGA
TGTGTTTGGAGTGTTGAAGGTTACATGA back to topCoding sequence (CDS) from alignment at An11:1682062..1682789+ >CBS51388_007056-T1 ID=CBS51388_007056-T1|Name=CBS51388_007056-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1566bp|location=Sequence derived from alignment at An11:1682062..1682789+ (Aspergillus niger CBS 513.88)
ATGGGTATCTGCGCCTCATGTCTAGGACGTAATCGTCAGGAACCCCACGA
TCCCAACCACCCCGAATCTTCCCGCCTCCTCGATGAAGACATCTACCAAC
CGGGCTACGGTTACGGCGCCCTCCACCAAAGCACCCAAGGCAATCACCCA
GACCCCAGCTACCTGAAGCGCGAACGAGAAGCCCTCGAAGCAATCTGTCA
GCGGACATCAGATTCCGTTATCGACATCTGGTCCCTCCAACCCCAACCGC
ATCTCCAACCTCGCGCCACCCTCCCCAGCACTGTCCCCCCTCCTTCATCC
TCCGATGGCGATGCGCCGCCCGTGAAAGTAATAACAACCGACTCGACACC
GGCCCGTTCAAAGAAACATTCCTCTCCGGCTGCGAAGGCGGGCGGCACGG
TCCCGAAACATTGGGGTGAGGTGGTGATAAATACGCGCAAGAATCGGTCG
CGGCCTGGGTCGAGTACGGACGAAGACGGTGCTGCTAAGAGAGATGTGTT
TGGAGTGTTGAAGGTTACATGAATGGGTATCTGCGCCTCATGTCTAGGAC
GTAATCGTCAGGAACCCCACGATCCCAACCACCCCGAATCTTCCCGCCTC
CTCGATGAAGACATCTACCAACCGGGCTACGGTTACGGCGCCCTCCACCA
AAGCACCCAAGGCAATCACCCAGACCCCAGCTACCTGAAGCGCGAACGAG
AAGCCCTCGAAGCAATCTGTCAGCGGACATCAGATTCCGTTATCGACATC
TGGTCCCTCCAACCCCAACCGCATCTCCAACCTCGCGCCACCCTCCCCAG
CACTGTCCCCCCTCCTTCATCCTCCGATGGCGATGCGCCGCCCGTGAAAG
TAATAACAACCGACTCGACACCGGCCCGTTCAAAGAAACATTCCTCTCCG
GCTGCGAAGGCGGGCGGCACGGTCCCGAAACATTGGGGTGAGGTGGTGAT
AAATACGCGCAAGAATCGGTCGCGGCCTGGGTCGAGTACGGACGAAGACG
GTGCTGCTAAGAGAGATGTGTTTGGAGTGTTGAAGGTTACATGAATGGGT
ATCTGCGCCTCATGTCTAGGACGTAATCGTCAGGAACCCCACGATCCCAA
CCACCCCGAATCTTCCCGCCTCCTCGATGAAGACATCTACCAACCGGGCT
ACGGTTACGGCGCCCTCCACCAAAGCACCCAAGGCAATCACCCAGACCCC
AGCTACCTGAAGCGCGAACGAGAAGCCCTCGAAGCAATCTGTCAGCGGAC
ATCAGATTCCGTTATCGACATCTGGTCCCTCCAACCCCAACCGCATCTCC
AACCTCGCGCCACCCTCCCCAGCACTGTCCCCCCTCCTTCATCCTCCGAT
GGCGATGCGCCGCCCGTGAAAGTAATAACAACCGACTCGACACCGGCCCG
TTCAAAGAAACATTCCTCTCCGGCTGCGAAGGCGGGCGGCACGGTCCCGA
AACATTGGGGTGAGGTGGTGATAAATACGCGCAAGAATCGGTCGCGGCCT
GGGTCGAGTACGGACGAAGACGGTGCTGCTAAGAGAGATGTGTTTGGAGT
GTTGAAGGTTACATGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0071986 | Ragulator complex |
| GO:0031902 | late endosome membrane |
| GO:0045121 | membrane raft |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0032008 | positive regulation of TOR signaling |
| GO:0007040 | lysosome organization |
| GO:0071230 | cellular response to amino acid stimulus |
| GO:0016197 | endosomal transport |
| GO:0043410 | positive regulation of MAPK cascade |
| GO:0042632 | cholesterol homeostasis |
| GO:0001919 | regulation of receptor recycling |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR028209 |
| DBxref | PFAM:PF15454 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An11 | supercontig | An11:1682062..1682789 + |
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