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Sequences
The following sequences are available for this feature:
mRNA from alignment at An11:1683851..1684967- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_007057-T1 ID=CBS51388_007057-T1|Name=CBS51388_007057-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1117bp|location=Sequence derived from alignment at An11:1683851..1684967- (Aspergillus niger CBS 513.88)
ATGAGTAGCCCGAAGCGGAGAATTGAGACAGATGTGAGTACCCCTCCCCT
CGGTACCCCTCATGCCCTTGCGGCGAAAGTGGTGGCGGAAGGACTAACGC
TTGGGATTTGTCCACATATAGGTCATGAAGTACGCCCTCGTACCGCTGTT
GCGCTCATACCTGATAGCTGACTGACTGATATTCTGGCAGGATGTACGCA
CCCTTCCCCGTATCCGGCACCTATCATACCCCCCCTCAACTTGGGTTGGA
ATGAGCACGCAATTTCGGATATGGGACAGGTCAACAGATTTCAGGGGGAC
TGGTGCTGATGTTTCGCATAGGTTGATGAGTGATTATGAGGTGACTCTGG
TCAATGATAACAGTAAGTGCACTCAGTCTTTTGCCACCGACCATCGGACA
CTGACTTTGATTTGCAGTGTATGCAGACTCTGCTTGCCCTACAATCGTCA
GATGCACGATTGATATTGACTGCTCGCTTTGTTAGGCAAGAGTTCTACGT
GCGTTTTAAGGGACCTGAAGAGAGTAAGACCCATACAATTTCCGACTATG
GCAAATCAAACCTGCTGACATAGCCAGCACCCTTTGCCGGTGGCCACTGG
AAGATCCACGTCGAACTACCCGACCAGTACCCATACAAGAGCCCGAGTAT
CGGATTTGTGAACCGGATTTTCCACCCGAACATCGATGAGCTGTAAGACA
ACTTCGACAAATCTTGTGTCCAACGGCTAACCCCAGCTGCCCAGGTCGGG
TTCCGTTTGTTTGGATGTCATAAATCAAACATGGTCGCCCATGTACGATA
TGATCAACATCTTCGAGGTCTTCCTTCCTCAGCTCCTGCGCTACCCCAAC
CCTTCGGACCCTCTCAACGGCGAAGCAGCTGCTATGCTCATGCGGGAGCC
AAAGAGCTACGAGGCAAAGGTCAAGGGTACGTTGCCACATATGCGACATA
CTTCGTCATCCTTAGCTGACGTGTCACCAGAGTACGTGGCCAAATACGCC
AGCAAAGAGGCTGTCGATGAAGCCGGGGAAGACACAGAGTCGGAAGACGA
ACTGAGCTCGGCAGGCAGTTACGAGTCCGGCGGCGAAGAGCCAGCCGGTA
CGATGGACGACGTCTAA back to topCoding sequence (CDS) from alignment at An11:1683851..1684967- >CBS51388_007057-T1 ID=CBS51388_007057-T1|Name=CBS51388_007057-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4914bp|location=Sequence derived from alignment at An11:1683851..1684967- (Aspergillus niger CBS 513.88)
AGTACGTGGCCAAATACGCCAGCAAAGAGGCTGTCGATGAAGCCGGGGAA
GACACAGAGTCGGAAGACGAACTGAGCTCGGCAGGCAGTTACGAGTCCGG
CGGCGAAGAGCCAGCCGGTACGATGGACGACGTCTAAGTCGGGTTCCGTT
TGTTTGGATGTCATAAATCAAACATGGTCGCCCATGTACGATATGATCAA
CATCTTCGAGGTCTTCCTTCCTCAGCTCCTGCGCTACCCCAACCCTTCGG
ACCCTCTCAACGGCGAAGCAGCTGCTATGCTCATGCGGGAGCCAAAGAGC
TACGAGGCAAAGGTCAAGGCACCCTTTGCCGGTGGCCACTGGAAGATCCA
CGTCGAACTACCCGACCAGTACCCATACAAGAGCCCGAGTATCGGATTTG
TGAACCGGATTTTCCACCCGAACATCGATGAGCTTGTATGCAGACTCTGC
TTGCCCTACAATCGTCAGATGCACGATTGATATTGACTGCTCGCTTTGTT
AGGCAAGAGTTCTACGTGCGTTTTAAGGGACCTGAAGAGAGATGTACGCA
CCCTTCCCCGTATCCGGCACCTATCATACCCCCCCTCAACTTGGGTTGGA
ATGAGCACGCAATTTCGGATATGGGACAGGTCAACAGATTTCAGGGGGAC
TGGTGCTGATGTTTCGCATAGGTTGATGAGTGATTATGAGATGAGTAGCC
CGAAGCGGAGAATTGAGACAGATGTGAGTACCCCTCCCCTCGGTACCCCT
CATGCCCTTGCGGCGAAAGTGGTGGCGGAAGGACTAACGCTTGGGATTTG
TCCACATATAGGTCATGAAAGTACGTGGCCAAATACGCCAGCAAAGAGGC
TGTCGATGAAGCCGGGGAAGACACAGAGTCGGAAGACGAACTGAGCTCGG
CAGGCAGTTACGAGTCCGGCGGCGAAGAGCCAGCCGGTACGATGGACGAC
GTCTAAGTCGGGTTCCGTTTGTTTGGATGTCATAAATCAAACATGGTCGC
CCATGTACGATATGATCAACATCTTCGAGGTCTTCCTTCCTCAGCTCCTG
CGCTACCCCAACCCTTCGGACCCTCTCAACGGCGAAGCAGCTGCTATGCT
CATGCGGGAGCCAAAGAGCTACGAGGCAAAGGTCAAGGCACCCTTTGCCG
GTGGCCACTGGAAGATCCACGTCGAACTACCCGACCAGTACCCATACAAG
AGCCCGAGTATCGGATTTGTGAACCGGATTTTCCACCCGAACATCGATGA
GCTTGTATGCAGACTCTGCTTGCCCTACAATCGTCAGATGCACGATTGAT
ATTGACTGCTCGCTTTGTTAGGCAAGAGTTCTACGTGCGTTTTAAGGGAC
CTGAAGAGAGATGTACGCACCCTTCCCCGTATCCGGCACCTATCATACCC
CCCCTCAACTTGGGTTGGAATGAGCACGCAATTTCGGATATGGGACAGGT
CAACAGATTTCAGGGGGACTGGTGCTGATGTTTCGCATAGGTTGATGAGT
GATTATGAGATGAGTAGCCCGAAGCGGAGAATTGAGACAGATGTGAGTAC
CCCTCCCCTCGGTACCCCTCATGCCCTTGCGGCGAAAGTGGTGGCGGAAG
GACTAACGCTTGGGATTTGTCCACATATAGGTCATGAAAGTACGTGGCCA
AATACGCCAGCAAAGAGGCTGTCGATGAAGCCGGGGAAGACACAGAGTCG
GAAGACGAACTGAGCTCGGCAGGCAGTTACGAGTCCGGCGGCGAAGAGCC
AGCCGGTACGATGGACGACGTCTAAGTCGGGTTCCGTTTGTTTGGATGTC
ATAAATCAAACATGGTCGCCCATGTACGATATGATCAACATCTTCGAGGT
CTTCCTTCCTCAGCTCCTGCGCTACCCCAACCCTTCGGACCCTCTCAACG
GCGAAGCAGCTGCTATGCTCATGCGGGAGCCAAAGAGCTACGAGGCAAAG
GTCAAGGCACCCTTTGCCGGTGGCCACTGGAAGATCCACGTCGAACTACC
CGACCAGTACCCATACAAGAGCCCGAGTATCGGATTTGTGAACCGGATTT
TCCACCCGAACATCGATGAGCTTGTATGCAGACTCTGCTTGCCCTACAAT
CGTCAGATGCACGATTGATATTGACTGCTCGCTTTGTTAGGCAAGAGTTC
TACGTGCGTTTTAAGGGACCTGAAGAGAGATGTACGCACCCTTCCCCGTA
TCCGGCACCTATCATACCCCCCCTCAACTTGGGTTGGAATGAGCACGCAA
TTTCGGATATGGGACAGGTCAACAGATTTCAGGGGGACTGGTGCTGATGT
TTCGCATAGGTTGATGAGTGATTATGAGATGAGTAGCCCGAAGCGGAGAA
TTGAGACAGATGTGAGTACCCCTCCCCTCGGTACCCCTCATGCCCTTGCG
GCGAAAGTGGTGGCGGAAGGACTAACGCTTGGGATTTGTCCACATATAGG
TCATGAAAGTACGTGGCCAAATACGCCAGCAAAGAGGCTGTCGATGAAGC
CGGGGAAGACACAGAGTCGGAAGACGAACTGAGCTCGGCAGGCAGTTACG
AGTCCGGCGGCGAAGAGCCAGCCGGTACGATGGACGACGTCTAAGTCGGG
TTCCGTTTGTTTGGATGTCATAAATCAAACATGGTCGCCCATGTACGATA
TGATCAACATCTTCGAGGTCTTCCTTCCTCAGCTCCTGCGCTACCCCAAC
CCTTCGGACCCTCTCAACGGCGAAGCAGCTGCTATGCTCATGCGGGAGCC
AAAGAGCTACGAGGCAAAGGTCAAGGCACCCTTTGCCGGTGGCCACTGGA
AGATCCACGTCGAACTACCCGACCAGTACCCATACAAGAGCCCGAGTATC
GGATTTGTGAACCGGATTTTCCACCCGAACATCGATGAGCTTGTATGCAG
ACTCTGCTTGCCCTACAATCGTCAGATGCACGATTGATATTGACTGCTCG
CTTTGTTAGGCAAGAGTTCTACGTGCGTTTTAAGGGACCTGAAGAGAGAT
GTACGCACCCTTCCCCGTATCCGGCACCTATCATACCCCCCCTCAACTTG
GGTTGGAATGAGCACGCAATTTCGGATATGGGACAGGTCAACAGATTTCA
GGGGGACTGGTGCTGATGTTTCGCATAGGTTGATGAGTGATTATGAGATG
AGTAGCCCGAAGCGGAGAATTGAGACAGATGTGAGTACCCCTCCCCTCGG
TACCCCTCATGCCCTTGCGGCGAAAGTGGTGGCGGAAGGACTAACGCTTG
GGATTTGTCCACATATAGGTCATGAAAGTACGTGGCCAAATACGCCAGCA
AAGAGGCTGTCGATGAAGCCGGGGAAGACACAGAGTCGGAAGACGAACTG
AGCTCGGCAGGCAGTTACGAGTCCGGCGGCGAAGAGCCAGCCGGTACGAT
GGACGACGTCTAAGTCGGGTTCCGTTTGTTTGGATGTCATAAATCAAACA
TGGTCGCCCATGTACGATATGATCAACATCTTCGAGGTCTTCCTTCCTCA
GCTCCTGCGCTACCCCAACCCTTCGGACCCTCTCAACGGCGAAGCAGCTG
CTATGCTCATGCGGGAGCCAAAGAGCTACGAGGCAAAGGTCAAGGCACCC
TTTGCCGGTGGCCACTGGAAGATCCACGTCGAACTACCCGACCAGTACCC
ATACAAGAGCCCGAGTATCGGATTTGTGAACCGGATTTTCCACCCGAACA
TCGATGAGCTTGTATGCAGACTCTGCTTGCCCTACAATCGTCAGATGCAC
GATTGATATTGACTGCTCGCTTTGTTAGGCAAGAGTTCTACGTGCGTTTT
AAGGGACCTGAAGAGAGATGTACGCACCCTTCCCCGTATCCGGCACCTAT
CATACCCCCCCTCAACTTGGGTTGGAATGAGCACGCAATTTCGGATATGG
GACAGGTCAACAGATTTCAGGGGGACTGGTGCTGATGTTTCGCATAGGTT
GATGAGTGATTATGAGATGAGTAGCCCGAAGCGGAGAATTGAGACAGATG
TGAGTACCCCTCCCCTCGGTACCCCTCATGCCCTTGCGGCGAAAGTGGTG
GCGGAAGGACTAACGCTTGGGATTTGTCCACATATAGGTCATGAAAGTAC
GTGGCCAAATACGCCAGCAAAGAGGCTGTCGATGAAGCCGGGGAAGACAC
AGAGTCGGAAGACGAACTGAGCTCGGCAGGCAGTTACGAGTCCGGCGGCG
AAGAGCCAGCCGGTACGATGGACGACGTCTAAGTCGGGTTCCGTTTGTTT
GGATGTCATAAATCAAACATGGTCGCCCATGTACGATATGATCAACATCT
TCGAGGTCTTCCTTCCTCAGCTCCTGCGCTACCCCAACCCTTCGGACCCT
CTCAACGGCGAAGCAGCTGCTATGCTCATGCGGGAGCCAAAGAGCTACGA
GGCAAAGGTCAAGGCACCCTTTGCCGGTGGCCACTGGAAGATCCACGTCG
AACTACCCGACCAGTACCCATACAAGAGCCCGAGTATCGGATTTGTGAAC
CGGATTTTCCACCCGAACATCGATGAGCTTGTATGCAGACTCTGCTTGCC
CTACAATCGTCAGATGCACGATTGATATTGACTGCTCGCTTTGTTAGGCA
AGAGTTCTACGTGCGTTTTAAGGGACCTGAAGAGAGATGTACGCACCCTT
CCCCGTATCCGGCACCTATCATACCCCCCCTCAACTTGGGTTGGAATGAG
CACGCAATTTCGGATATGGGACAGGTCAACAGATTTCAGGGGGACTGGTG
CTGATGTTTCGCATAGGTTGATGAGTGATTATGAGATGAGTAGCCCGAAG
CGGAGAATTGAGACAGATGTGAGTACCCCTCCCCTCGGTACCCCTCATGC
CCTTGCGGCGAAAGTGGTGGCGGAAGGACTAACGCTTGGGATTTGTCCAC
ATATAGGTCATGAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264Z1B |
| DBxref | InterPro:IPR023313 |
| DBxref | InterPro:IPR016135 |
| DBxref | InterPro:IPR000608 |
| DBxref | PFAM:PF00179 |
| Product | Ubiquitin-conjugating enzyme E2 8 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An11 | supercontig | An11:1683851..1684967 - |
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