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CBS51388_007059-T1, CBS51388_007059-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_007059-T1
Unique NameCBS51388_007059-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An11:1687562..1688671-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_007059-T1 ID=CBS51388_007059-T1|Name=CBS51388_007059-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1110bp|location=Sequence derived from alignment at An11:1687562..1688671- (Aspergillus niger CBS 513.88)
ATGGCTTCAAGATTCTCGGCGCAATTGCTAGTGCCTTTGGCGCGGTCGTC
CGTTCGCTGTCGGGCTGCATCCACTCCCGTCTTCTCGGTTCTCGCCGGCC
GACATGCCATCGCCACTCCTTCACCAACAGAGCTTCAGAAGCGGTATAGC
TCTCATTCTCCGCTGGGGGCCGCCTCGGCCAATCCCCGAAAGAAGGTGAC
CATGCAGACGTTACGGAATCTTTACAAGAAAGGGGAGCCAATTACGATGC
TTACGGCGCATGACTTCCCCAGTGGCCATGTCGCGGAAATGGCGGGGATG
GACGTGGTCCTGGTCGGTGACAGTTTGGCCATGGTTGCCCTCGGCATGGA
GGATACAAGTGAGATCCTCATGGATGAGATGTTGTTGCATTGTCGGAGTG
TCGCGCGTGCTGTCAAGAGTGCATTCACGGTTCGTTATTCTTACCGTCCT
TCTTGAGTCTGTCGAGATTAACGTGTGATTTCGGCGCAGGTCGCAGATCT
CCCCATGGGGTCATATGAAGTTTCCCCCGAGCAGGCTGTTCAGTCTGCCA
TCCGCATCGCGAAGGAGGGTCGCGTTCAGGCTATCAAGCTCGAGGGTGGT
GCTGAGATGGCTCCGTCCATCAAACGTATCACGCAGGCCGGTATCCCTGT
TTGCGGTCACATCGGGCTTACGCCTCAACGTCAACACGCTCTTGGAGGAT
TCAGGGTTCAGGGCAAAACGACCGCCAGCGCAGTGAGGCTGTTGAAAGAT
GCCTTGGCCGTCCAGGAAGCTGGCGCATTCATGATGGTTCTGGAAGCCGT
GCCTGCTGAGATTGCCGCCCTCATTACTAAGAAGTTGCGTATCCCCACGA
TTGGCATCGGTGCTGGAAACGGATGCTCCGGACAAGTCCTGGTTCAAATT
GATATGATCGGGAACTACCCCCCGGGCCGGTTCCTTCCCAAATTCGTCAA
GAAGTATGGCGACGTCTGGGGAGAGGCTATCAAAGGAATTCAACAATACC
GTGAAGAGGTTAAGAGCCGGGCGTATCCTTCCGAAGAATACACCTACCCT
ATTGCGAAGGAAGAATTGGCCGAGTTTGAAAAGGCCATTGAACACTTCGG
CAAGGACTAA
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Coding sequence (CDS) from alignment at An11:1687562..1688671-

>CBS51388_007059-T1 ID=CBS51388_007059-T1|Name=CBS51388_007059-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2100bp|location=Sequence derived from alignment at An11:1687562..1688671- (Aspergillus niger CBS 513.88)
GTCGCAGATCTCCCCATGGGGTCATATGAAGTTTCCCCCGAGCAGGCTGT
TCAGTCTGCCATCCGCATCGCGAAGGAGGGTCGCGTTCAGGCTATCAAGC
TCGAGGGTGGTGCTGAGATGGCTCCGTCCATCAAACGTATCACGCAGGCC
GGTATCCCTGTTTGCGGTCACATCGGGCTTACGCCTCAACGTCAACACGC
TCTTGGAGGATTCAGGGTTCAGGGCAAAACGACCGCCAGCGCAGTGAGGC
TGTTGAAAGATGCCTTGGCCGTCCAGGAAGCTGGCGCATTCATGATGGTT
CTGGAAGCCGTGCCTGCTGAGATTGCCGCCCTCATTACTAAGAAGTTGCG
TATCCCCACGATTGGCATCGGTGCTGGAAACGGATGCTCCGGACAAGTCC
TGGTTCAAATTGATATGATCGGGAACTACCCCCCGGGCCGGTTCCTTCCC
AAATTCGTCAAGAAGTATGGCGACGTCTGGGGAGAGGCTATCAAAGGAAT
TCAACAATACCGTGAAGAGGTTAAGAGCCGGGCGTATCCTTCCGAAGAAT
ACACCTACCCTATTGCGAAGGAAGAATTGGCCGAGTTTGAAAAGGCCATT
GAACACTTCGGCAAGGACTAAATGGCTTCAAGATTCTCGGCGCAATTGCT
AGTGCCTTTGGCGCGGTCGTCCGTTCGCTGTCGGGCTGCATCCACTCCCG
TCTTCTCGGTTCTCGCCGGCCGACATGCCATCGCCACTCCTTCACCAACA
GAGCTTCAGAAGCGGTATAGCTCTCATTCTCCGCTGGGGGCCGCCTCGGC
CAATCCCCGAAAGAAGGTGACCATGCAGACGTTACGGAATCTTTACAAGA
AAGGGGAGCCAATTACGATGCTTACGGCGCATGACTTCCCCAGTGGCCAT
GTCGCGGAAATGGCGGGGATGGACGTGGTCCTGGTCGGTGACAGTTTGGC
CATGGTTGCCCTCGGCATGGAGGATACAAGTGAGATCCTCATGGATGAGA
TGTTGTTGCATTGTCGGAGTGTCGCGCGTGCTGTCAAGAGTGCATTCACG
GTCGCAGATCTCCCCATGGGGTCATATGAAGTTTCCCCCGAGCAGGCTGT
TCAGTCTGCCATCCGCATCGCGAAGGAGGGTCGCGTTCAGGCTATCAAGC
TCGAGGGTGGTGCTGAGATGGCTCCGTCCATCAAACGTATCACGCAGGCC
GGTATCCCTGTTTGCGGTCACATCGGGCTTACGCCTCAACGTCAACACGC
TCTTGGAGGATTCAGGGTTCAGGGCAAAACGACCGCCAGCGCAGTGAGGC
TGTTGAAAGATGCCTTGGCCGTCCAGGAAGCTGGCGCATTCATGATGGTT
CTGGAAGCCGTGCCTGCTGAGATTGCCGCCCTCATTACTAAGAAGTTGCG
TATCCCCACGATTGGCATCGGTGCTGGAAACGGATGCTCCGGACAAGTCC
TGGTTCAAATTGATATGATCGGGAACTACCCCCCGGGCCGGTTCCTTCCC
AAATTCGTCAAGAAGTATGGCGACGTCTGGGGAGAGGCTATCAAAGGAAT
TCAACAATACCGTGAAGAGGTTAAGAGCCGGGCGTATCCTTCCGAAGAAT
ACACCTACCCTATTGCGAAGGAAGAATTGGCCGAGTTTGAAAAGGCCATT
GAACACTTCGGCAAGGACTAAATGGCTTCAAGATTCTCGGCGCAATTGCT
AGTGCCTTTGGCGCGGTCGTCCGTTCGCTGTCGGGCTGCATCCACTCCCG
TCTTCTCGGTTCTCGCCGGCCGACATGCCATCGCCACTCCTTCACCAACA
GAGCTTCAGAAGCGGTATAGCTCTCATTCTCCGCTGGGGGCCGCCTCGGC
CAATCCCCGAAAGAAGGTGACCATGCAGACGTTACGGAATCTTTACAAGA
AAGGGGAGCCAATTACGATGCTTACGGCGCATGACTTCCCCAGTGGCCAT
GTCGCGGAAATGGCGGGGATGGACGTGGTCCTGGTCGGTGACAGTTTGGC
CATGGTTGCCCTCGGCATGGAGGATACAAGTGAGATCCTCATGGATGAGA
TGTTGTTGCATTGTCGGAGTGTCGCGCGTGCTGTCAAGAGTGCATTCACG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0015940pantothenate biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:00038643-methyl-2-oxobutanoate hydroxymethyltransferase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_007059CBS51388_007059Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007059-T1CBS51388_007059-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007059-T1.cdsCBS51388_007059-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007059-T1.exon2CBS51388_007059-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_007059-T1.exon1CBS51388_007059-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
NoteBUSCO:EOG09263FTE
DBxrefInterPro:IPR015813
DBxrefInterPro:IPR040442
DBxrefInterPro:IPR003700
DBxrefPFAM:PF02548
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An11supercontigAn11:1687562..1688671 -
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