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Sequences
The following sequences are available for this feature:
mRNA from alignment at An11:1690614..1692830- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_007060-T1 ID=CBS51388_007060-T1|Name=CBS51388_007060-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2217bp|location=Sequence derived from alignment at An11:1690614..1692830- (Aspergillus niger CBS 513.88)
ATGGCAGCTGTATTCGTACCACCTTCGCCTCGGTCTTCGCTTAATATGTC
GACTCGCCGACCACTTGCCAACGTGCCGAATGCTACCAATTCCCCTCACA
GGTCAGGCCTCGTGCCTGCCAAACGTCTACGTCCAACGAGTAACCAGATT
GACATCCCTTACGGCCAGCCTCCTCCGAAGAAGCAGGTAGTGGACGGTCA
GGAGGCGGACGCTCGATCCCCAACCCGGACCAGGGCGTCCGCATACCAAA
ACACGGACTCCAAACTGTTCTTGCGGCGCACGAATAATGCTCAACCGAGT
GCATTCGAAAGGAAACTGGTCGCTGTGAGAGATAAAGAACGACAGGCACA
AATGAAAGGCACGAGGCACGAGAGGCCTTCTGCGGAGACCCTCGATTCCA
TCCGGCAGTGGCAGAGGCATTACCGCAAGGCGTTTCCTCAGTTTGTTTTC
TACTTTGATAGCATCCCGGAAGATGTTCGCAGCAAGAGCTCTAGGCAGGT
ACTTGCATTGGGAGCGGTAAGTTTCCGTCTGGCTCGACATCTCCTACACT
TGATCCTTTAAAGGAGCTGCGTGCTGAGGGTCAATGATGCCCCACCGTTC
CATTGCGGAGGTTATATCTACGTGACTGCGTAACTTTACTGACTTCATTC
GTCACAGCGTGAAGAAAAATTCTTCTCGCGTCTAGTGACCCACGTCGTCA
CGTCTCGTCCTATTCCTCCAGAAAACGGTCCCACGAATGCACCTGAATAC
AATGCGGAGTCGGCGGAGCAAGCGGCGGCGGATGGTTCGCTGCAGACAGT
AAACCCGTCCCTGCTCGAGAAGTGCGCCGATACACACCTTCATATGACCT
TGAAAAACGATGCACGGCGGGAGCAGAAGGGCATGGATGTTTTACACAGA
GCCCGCCAGATGGGAATGAAGATCTGGGCGATCGAAAAACTGCAGCGCAT
GATCACGGCGATCAATGATGGCGATGTCGGAGGGCATGATGGCCATGCGA
CGCGAAACAGCAATGCTGCTGGCGGCCATGCCAGGGCTCGGGGTGAAAAT
GATCTTTCGCAAGTGCTTCAGAATGAGCTGAATGGCCCGTCAGATCGCAA
TCCTCTCTCGGTGTTGAAGGAGCTGGTTATGTTCAAGGGTCCTTTCATAT
ATGTCCATGACATGGACGAGAAGACGCGCCCTGTGATGGTGCGAGAATAC
CCAAAGGTTGCAAGGCGGCAGGATGGTATATGGCCGCAATTCCGAAGTGC
ACGGCTGGGAAAGTGTCCGTTCATTGAGGACCCGCCTACACAGAAGGACA
TTGACCGTCAACGTGCCCGTATAAAAGAGAGGACGGAGAGACAGGAAAGG
GACGAAAGAGCTGTTGCTAATGCTGCTCCTGTACAAGACGTTCCGGACGC
GAAACTAAATGCACCAGAAACTCATAGGAAGGTTACAAAGCACGAGGATA
AGACTCCCGAATTGGGCCAAACAGAAGAGGCACCCCTTGAGCCCCAGCCT
GAACTCCAGGACATTCAGTCGACGAAACAATTATCGCCCAGGAAAAGCTC
CGAGAGCTTTGTGCCCCCGCCTCCTCAACGGAAAGGGCCATTCTTCCATG
GCCGTGAACCTGCCGCATCAGGCGTACAACCCTCGAATATTACGTCCGCC
ATTCGTTCGCAGATGGTTTCATCGACGGCTGCTGCACCTGGTGCCAAGGC
TGGCCTGAGCAAGGAAGTTCATGAACTCAAGAGAAAGGTGCTCGAAAAAG
GAAATGGAGGGCTTACAGCGGGGACTATGCCTCCATCACACCACGCCGTA
GATGGAGCCGCACCGTTGAAGGCGAAACCATTGGAAAACAGCCTCGGAAA
TATGCAACCGCCTAAAAAGCTCGTAAATGTCCCTGAGGAGGAATCAACGC
AGTTGGAAAACAACGGCGCTCCCAAGCGGCGGGCCGGTGATCGGAAAACC
GTAATAATACCGAAAAGGAAGGAGAGACGGAGAGACCCTAAGCCAGGTTA
CTGTGAGAACTGCAGGGACAAATTCGATGACTTCGAAGAGGTTAGTCCGG
AGGCTCAAGATTCAGAAAAGAAGAATGCTAACCTTTGGCAGCACATTGTA
ACTCGGAAGCACCGCCGCTTTGCGACAAACCGAGCGAACTGGGCCGAGCT
CGACGCCTTACTTTATCAGCTGGAGAGGCCTGTGAAATCTGGTGCGGAAG
GTGTCCCAGGTTTATAA back to topCoding sequence (CDS) from alignment at An11:1690614..1692830- >CBS51388_007060-T1 ID=CBS51388_007060-T1|Name=CBS51388_007060-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4152bp|location=Sequence derived from alignment at An11:1690614..1692830- (Aspergillus niger CBS 513.88)
CGTGAAGAAAAATTCTTCTCGCGTCTAGTGACCCACGTCGTCACGTCTCG
TCCTATTCCTCCAGAAAACGGTCCCACGAATGCACCTGAATACAATGCGG
AGTCGGCGGAGCAAGCGGCGGCGGATGGTTCGCTGCAGACAGTAAACCCG
TCCCTGCTCGAGAAGTGCGCCGATACACACCTTCATATGACCTTGAAAAA
CGATGCACGGCGGGAGCAGAAGGGCATGGATGTTTTACACAGAGCCCGCC
AGATGGGAATGAAGATCTGGGCGATCGAAAAACTGCAGCGCATGATCACG
GCGATCAATGATGGCGATGTCGGAGGGCATGATGGCCATGCGACGCGAAA
CAGCAATGCTGCTGGCGGCCATGCCAGGGCTCGGGGTGAAAATGATCTTT
CGCAAGTGCTTCAGAATGAGCTGAATGGCCCGTCAGATCGCAATCCTCTC
TCGGTGTTGAAGGAGCTGGTTATGTTCAAGGGTCCTTTCATATATGTCCA
TGACATGGACGAGAAGACGCGCCCTGTGATGGTGCGAGAATACCCAAAGG
TTGCAAGGCGGCAGGATGGTATATGGCCGCAATTCCGAAGTGCACGGCTG
GGAAAGTGTCCGTTCATTGAGGACCCGCCTACACAGAAGGACATTGACCG
TCAACGTGCCCGTATAAAAGAGAGGACGGAGAGACAGGAAAGGGACGAAA
GAGCTGTTGCTAATGCTGCTCCTGTACAAGACGTTCCGGACGCGAAACTA
AATGCACCAGAAACTCATAGGAAGGTTACAAAGCACGAGGATAAGACTCC
CGAATTGGGCCAAACAGAAGAGGCACCCCTTGAGCCCCAGCCTGAACTCC
AGGACATTCAGTCGACGAAACAATTATCGCCCAGGAAAAGCTCCGAGAGC
TTTGTGCCCCCGCCTCCTCAACGGAAAGGGCCATTCTTCCATGGCCGTGA
ACCTGCCGCATCAGGCGTACAACCCTCGAATATTACGTCCGCCATTCGTT
CGCAGATGGTTTCATCGACGGCTGCTGCACCTGGTGCCAAGGCTGGCCTG
AGCAAGGAAGTTCATGAACTCAAGAGAAAGGTGCTCGAAAAAGGAAATGG
AGGGCTTACAGCGGGGACTATGCCTCCATCACACCACGCCGTAGATGGAG
CCGCACCGTTGAAGGCGAAACCATTGGAAAACAGCCTCGGAAATATGCAA
CCGCCTAAAAAGCTCGTAAATGTCCCTGAGGAGGAATCAACGCAGTTGGA
AAACAACGGCGCTCCCAAGCGGCGGGCCGGTGATCGGAAAACCGTAATAA
TACCGAAAAGGAAGGAGAGACGGAGAGACCCTAAGCCAGGTTACTGTGAG
AACTGCAGGGACAAATTCGATGACTTCGAAGAGGTTAGTCCGGAGGCTCA
AGATTCAGAAAAGAAGAATGCTAACCTTTGGCAGCACATTGTAACTCGGA
AGCACCGCCGCTTTGCGACAAACCGAGCGAACTGGGCCGAGCTCGACGCC
TTACTTTATCAGCTGGAGAGGCCTGTGAAATCTGGTGCGGAAGGTGTCCC
AGGTTTATAAATGGCAGCTGTATTCGTACCACCTTCGCCTCGGTCTTCGC
TTAATATGTCGACTCGCCGACCACTTGCCAACGTGCCGAATGCTACCAAT
TCCCCTCACAGGTCAGGCCTCGTGCCTGCCAAACGTCTACGTCCAACGAG
TAACCAGATTGACATCCCTTACGGCCAGCCTCCTCCGAAGAAGCAGGTAG
TGGACGGTCAGGAGGCGGACGCTCGATCCCCAACCCGGACCAGGGCGTCC
GCATACCAAAACACGGACTCCAAACTGTTCTTGCGGCGCACGAATAATGC
TCAACCGAGTGCATTCGAAAGGAAACTGGTCGCTGTGAGAGATAAAGAAC
GACAGGCACAAATGAAAGGCACGAGGCACGAGAGGCCTTCTGCGGAGACC
CTCGATTCCATCCGGCAGTGGCAGAGGCATTACCGCAAGGCGTTTCCTCA
GTTTGTTTTCTACTTTGATAGCATCCCGGAAGATGTTCGCAGCAAGAGCT
CTAGGCAGGTACTTGCATTGGGAGCGCGTGAAGAAAAATTCTTCTCGCGT
CTAGTGACCCACGTCGTCACGTCTCGTCCTATTCCTCCAGAAAACGGTCC
CACGAATGCACCTGAATACAATGCGGAGTCGGCGGAGCAAGCGGCGGCGG
ATGGTTCGCTGCAGACAGTAAACCCGTCCCTGCTCGAGAAGTGCGCCGAT
ACACACCTTCATATGACCTTGAAAAACGATGCACGGCGGGAGCAGAAGGG
CATGGATGTTTTACACAGAGCCCGCCAGATGGGAATGAAGATCTGGGCGA
TCGAAAAACTGCAGCGCATGATCACGGCGATCAATGATGGCGATGTCGGA
GGGCATGATGGCCATGCGACGCGAAACAGCAATGCTGCTGGCGGCCATGC
CAGGGCTCGGGGTGAAAATGATCTTTCGCAAGTGCTTCAGAATGAGCTGA
ATGGCCCGTCAGATCGCAATCCTCTCTCGGTGTTGAAGGAGCTGGTTATG
TTCAAGGGTCCTTTCATATATGTCCATGACATGGACGAGAAGACGCGCCC
TGTGATGGTGCGAGAATACCCAAAGGTTGCAAGGCGGCAGGATGGTATAT
GGCCGCAATTCCGAAGTGCACGGCTGGGAAAGTGTCCGTTCATTGAGGAC
CCGCCTACACAGAAGGACATTGACCGTCAACGTGCCCGTATAAAAGAGAG
GACGGAGAGACAGGAAAGGGACGAAAGAGCTGTTGCTAATGCTGCTCCTG
TACAAGACGTTCCGGACGCGAAACTAAATGCACCAGAAACTCATAGGAAG
GTTACAAAGCACGAGGATAAGACTCCCGAATTGGGCCAAACAGAAGAGGC
ACCCCTTGAGCCCCAGCCTGAACTCCAGGACATTCAGTCGACGAAACAAT
TATCGCCCAGGAAAAGCTCCGAGAGCTTTGTGCCCCCGCCTCCTCAACGG
AAAGGGCCATTCTTCCATGGCCGTGAACCTGCCGCATCAGGCGTACAACC
CTCGAATATTACGTCCGCCATTCGTTCGCAGATGGTTTCATCGACGGCTG
CTGCACCTGGTGCCAAGGCTGGCCTGAGCAAGGAAGTTCATGAACTCAAG
AGAAAGGTGCTCGAAAAAGGAAATGGAGGGCTTACAGCGGGGACTATGCC
TCCATCACACCACGCCGTAGATGGAGCCGCACCGTTGAAGGCGAAACCAT
TGGAAAACAGCCTCGGAAATATGCAACCGCCTAAAAAGCTCGTAAATGTC
CCTGAGGAGGAATCAACGCAGTTGGAAAACAACGGCGCTCCCAAGCGGCG
GGCCGGTGATCGGAAAACCGTAATAATACCGAAAAGGAAGGAGAGACGGA
GAGACCCTAAGCCAGGTTACTGTGAGAACTGCAGGGACAAATTCGATGAC
TTCGAAGAGGTTAGTCCGGAGGCTCAAGATTCAGAAAAGAAGAATGCTAA
CCTTTGGCAGCACATTGTAACTCGGAAGCACCGCCGCTTTGCGACAAACC
GAGCGAACTGGGCCGAGCTCGACGCCTTACTTTATCAGCTGGAGAGGCCT
GTGAAATCTGGTGCGGAAGGTGTCCCAGGTTTATAAATGGCAGCTGTATT
CGTACCACCTTCGCCTCGGTCTTCGCTTAATATGTCGACTCGCCGACCAC
TTGCCAACGTGCCGAATGCTACCAATTCCCCTCACAGGTCAGGCCTCGTG
CCTGCCAAACGTCTACGTCCAACGAGTAACCAGATTGACATCCCTTACGG
CCAGCCTCCTCCGAAGAAGCAGGTAGTGGACGGTCAGGAGGCGGACGCTC
GATCCCCAACCCGGACCAGGGCGTCCGCATACCAAAACACGGACTCCAAA
CTGTTCTTGCGGCGCACGAATAATGCTCAACCGAGTGCATTCGAAAGGAA
ACTGGTCGCTGTGAGAGATAAAGAACGACAGGCACAAATGAAAGGCACGA
GGCACGAGAGGCCTTCTGCGGAGACCCTCGATTCCATCCGGCAGTGGCAG
AGGCATTACCGCAAGGCGTTTCCTCAGTTTGTTTTCTACTTTGATAGCAT
CCCGGAAGATGTTCGCAGCAAGAGCTCTAGGCAGGTACTTGCATTGGGAG
CG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0003676 | nucleic acid binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR013939 |
| DBxref | InterPro:IPR036420 |
| DBxref | InterPro:IPR006572 |
| DBxref | PFAM:PF08630 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An11 | supercontig | An11:1690614..1692830 - |
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