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Sequences
The following sequences are available for this feature:
mRNA from alignment at An11:1690614..1692830- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_007060-T1 ID=CBS51388_007060-T1|Name=CBS51388_007060-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2217bp|location=Sequence derived from alignment at An11:1690614..1692830- (Aspergillus niger CBS 513.88) ATGGCAGCTGTATTCGTACCACCTTCGCCTCGGTCTTCGCTTAATATGTC
GACTCGCCGACCACTTGCCAACGTGCCGAATGCTACCAATTCCCCTCACA
GGTCAGGCCTCGTGCCTGCCAAACGTCTACGTCCAACGAGTAACCAGATT
GACATCCCTTACGGCCAGCCTCCTCCGAAGAAGCAGGTAGTGGACGGTCA
GGAGGCGGACGCTCGATCCCCAACCCGGACCAGGGCGTCCGCATACCAAA
ACACGGACTCCAAACTGTTCTTGCGGCGCACGAATAATGCTCAACCGAGT
GCATTCGAAAGGAAACTGGTCGCTGTGAGAGATAAAGAACGACAGGCACA
AATGAAAGGCACGAGGCACGAGAGGCCTTCTGCGGAGACCCTCGATTCCA
TCCGGCAGTGGCAGAGGCATTACCGCAAGGCGTTTCCTCAGTTTGTTTTC
TACTTTGATAGCATCCCGGAAGATGTTCGCAGCAAGAGCTCTAGGCAGGT
ACTTGCATTGGGAGCGGTAAGTTTCCGTCTGGCTCGACATCTCCTACACT
TGATCCTTTAAAGGAGCTGCGTGCTGAGGGTCAATGATGCCCCACCGTTC
CATTGCGGAGGTTATATCTACGTGACTGCGTAACTTTACTGACTTCATTC
GTCACAGCGTGAAGAAAAATTCTTCTCGCGTCTAGTGACCCACGTCGTCA
CGTCTCGTCCTATTCCTCCAGAAAACGGTCCCACGAATGCACCTGAATAC
AATGCGGAGTCGGCGGAGCAAGCGGCGGCGGATGGTTCGCTGCAGACAGT
AAACCCGTCCCTGCTCGAGAAGTGCGCCGATACACACCTTCATATGACCT
TGAAAAACGATGCACGGCGGGAGCAGAAGGGCATGGATGTTTTACACAGA
GCCCGCCAGATGGGAATGAAGATCTGGGCGATCGAAAAACTGCAGCGCAT
GATCACGGCGATCAATGATGGCGATGTCGGAGGGCATGATGGCCATGCGA
CGCGAAACAGCAATGCTGCTGGCGGCCATGCCAGGGCTCGGGGTGAAAAT
GATCTTTCGCAAGTGCTTCAGAATGAGCTGAATGGCCCGTCAGATCGCAA
TCCTCTCTCGGTGTTGAAGGAGCTGGTTATGTTCAAGGGTCCTTTCATAT
ATGTCCATGACATGGACGAGAAGACGCGCCCTGTGATGGTGCGAGAATAC
CCAAAGGTTGCAAGGCGGCAGGATGGTATATGGCCGCAATTCCGAAGTGC
ACGGCTGGGAAAGTGTCCGTTCATTGAGGACCCGCCTACACAGAAGGACA
TTGACCGTCAACGTGCCCGTATAAAAGAGAGGACGGAGAGACAGGAAAGG
GACGAAAGAGCTGTTGCTAATGCTGCTCCTGTACAAGACGTTCCGGACGC
GAAACTAAATGCACCAGAAACTCATAGGAAGGTTACAAAGCACGAGGATA
AGACTCCCGAATTGGGCCAAACAGAAGAGGCACCCCTTGAGCCCCAGCCT
GAACTCCAGGACATTCAGTCGACGAAACAATTATCGCCCAGGAAAAGCTC
CGAGAGCTTTGTGCCCCCGCCTCCTCAACGGAAAGGGCCATTCTTCCATG
GCCGTGAACCTGCCGCATCAGGCGTACAACCCTCGAATATTACGTCCGCC
ATTCGTTCGCAGATGGTTTCATCGACGGCTGCTGCACCTGGTGCCAAGGC
TGGCCTGAGCAAGGAAGTTCATGAACTCAAGAGAAAGGTGCTCGAAAAAG
GAAATGGAGGGCTTACAGCGGGGACTATGCCTCCATCACACCACGCCGTA
GATGGAGCCGCACCGTTGAAGGCGAAACCATTGGAAAACAGCCTCGGAAA
TATGCAACCGCCTAAAAAGCTCGTAAATGTCCCTGAGGAGGAATCAACGC
AGTTGGAAAACAACGGCGCTCCCAAGCGGCGGGCCGGTGATCGGAAAACC
GTAATAATACCGAAAAGGAAGGAGAGACGGAGAGACCCTAAGCCAGGTTA
CTGTGAGAACTGCAGGGACAAATTCGATGACTTCGAAGAGGTTAGTCCGG
AGGCTCAAGATTCAGAAAAGAAGAATGCTAACCTTTGGCAGCACATTGTA
ACTCGGAAGCACCGCCGCTTTGCGACAAACCGAGCGAACTGGGCCGAGCT
CGACGCCTTACTTTATCAGCTGGAGAGGCCTGTGAAATCTGGTGCGGAAG
GTGTCCCAGGTTTATAA back to topCoding sequence (CDS) from alignment at An11:1690614..1692830- >CBS51388_007060-T1 ID=CBS51388_007060-T1|Name=CBS51388_007060-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4152bp|location=Sequence derived from alignment at An11:1690614..1692830- (Aspergillus niger CBS 513.88) CGTGAAGAAAAATTCTTCTCGCGTCTAGTGACCCACGTCGTCACGTCTCG TCCTATTCCTCCAGAAAACGGTCCCACGAATGCACCTGAATACAATGCGG AGTCGGCGGAGCAAGCGGCGGCGGATGGTTCGCTGCAGACAGTAAACCCG TCCCTGCTCGAGAAGTGCGCCGATACACACCTTCATATGACCTTGAAAAA CGATGCACGGCGGGAGCAGAAGGGCATGGATGTTTTACACAGAGCCCGCC AGATGGGAATGAAGATCTGGGCGATCGAAAAACTGCAGCGCATGATCACG GCGATCAATGATGGCGATGTCGGAGGGCATGATGGCCATGCGACGCGAAA CAGCAATGCTGCTGGCGGCCATGCCAGGGCTCGGGGTGAAAATGATCTTT CGCAAGTGCTTCAGAATGAGCTGAATGGCCCGTCAGATCGCAATCCTCTC TCGGTGTTGAAGGAGCTGGTTATGTTCAAGGGTCCTTTCATATATGTCCA TGACATGGACGAGAAGACGCGCCCTGTGATGGTGCGAGAATACCCAAAGG TTGCAAGGCGGCAGGATGGTATATGGCCGCAATTCCGAAGTGCACGGCTG GGAAAGTGTCCGTTCATTGAGGACCCGCCTACACAGAAGGACATTGACCG TCAACGTGCCCGTATAAAAGAGAGGACGGAGAGACAGGAAAGGGACGAAA GAGCTGTTGCTAATGCTGCTCCTGTACAAGACGTTCCGGACGCGAAACTA AATGCACCAGAAACTCATAGGAAGGTTACAAAGCACGAGGATAAGACTCC CGAATTGGGCCAAACAGAAGAGGCACCCCTTGAGCCCCAGCCTGAACTCC AGGACATTCAGTCGACGAAACAATTATCGCCCAGGAAAAGCTCCGAGAGC TTTGTGCCCCCGCCTCCTCAACGGAAAGGGCCATTCTTCCATGGCCGTGA ACCTGCCGCATCAGGCGTACAACCCTCGAATATTACGTCCGCCATTCGTT CGCAGATGGTTTCATCGACGGCTGCTGCACCTGGTGCCAAGGCTGGCCTG AGCAAGGAAGTTCATGAACTCAAGAGAAAGGTGCTCGAAAAAGGAAATGG AGGGCTTACAGCGGGGACTATGCCTCCATCACACCACGCCGTAGATGGAG CCGCACCGTTGAAGGCGAAACCATTGGAAAACAGCCTCGGAAATATGCAA CCGCCTAAAAAGCTCGTAAATGTCCCTGAGGAGGAATCAACGCAGTTGGA AAACAACGGCGCTCCCAAGCGGCGGGCCGGTGATCGGAAAACCGTAATAA TACCGAAAAGGAAGGAGAGACGGAGAGACCCTAAGCCAGGTTACTGTGAG AACTGCAGGGACAAATTCGATGACTTCGAAGAGGTTAGTCCGGAGGCTCA AGATTCAGAAAAGAAGAATGCTAACCTTTGGCAGCACATTGTAACTCGGA AGCACCGCCGCTTTGCGACAAACCGAGCGAACTGGGCCGAGCTCGACGCC TTACTTTATCAGCTGGAGAGGCCTGTGAAATCTGGTGCGGAAGGTGTCCC AGGTTTATAAATGGCAGCTGTATTCGTACCACCTTCGCCTCGGTCTTCGC TTAATATGTCGACTCGCCGACCACTTGCCAACGTGCCGAATGCTACCAAT TCCCCTCACAGGTCAGGCCTCGTGCCTGCCAAACGTCTACGTCCAACGAG TAACCAGATTGACATCCCTTACGGCCAGCCTCCTCCGAAGAAGCAGGTAG TGGACGGTCAGGAGGCGGACGCTCGATCCCCAACCCGGACCAGGGCGTCC GCATACCAAAACACGGACTCCAAACTGTTCTTGCGGCGCACGAATAATGC TCAACCGAGTGCATTCGAAAGGAAACTGGTCGCTGTGAGAGATAAAGAAC GACAGGCACAAATGAAAGGCACGAGGCACGAGAGGCCTTCTGCGGAGACC CTCGATTCCATCCGGCAGTGGCAGAGGCATTACCGCAAGGCGTTTCCTCA GTTTGTTTTCTACTTTGATAGCATCCCGGAAGATGTTCGCAGCAAGAGCT CTAGGCAGGTACTTGCATTGGGAGCGCGTGAAGAAAAATTCTTCTCGCGT CTAGTGACCCACGTCGTCACGTCTCGTCCTATTCCTCCAGAAAACGGTCC CACGAATGCACCTGAATACAATGCGGAGTCGGCGGAGCAAGCGGCGGCGG ATGGTTCGCTGCAGACAGTAAACCCGTCCCTGCTCGAGAAGTGCGCCGAT ACACACCTTCATATGACCTTGAAAAACGATGCACGGCGGGAGCAGAAGGG CATGGATGTTTTACACAGAGCCCGCCAGATGGGAATGAAGATCTGGGCGA TCGAAAAACTGCAGCGCATGATCACGGCGATCAATGATGGCGATGTCGGA GGGCATGATGGCCATGCGACGCGAAACAGCAATGCTGCTGGCGGCCATGC CAGGGCTCGGGGTGAAAATGATCTTTCGCAAGTGCTTCAGAATGAGCTGA ATGGCCCGTCAGATCGCAATCCTCTCTCGGTGTTGAAGGAGCTGGTTATG TTCAAGGGTCCTTTCATATATGTCCATGACATGGACGAGAAGACGCGCCC TGTGATGGTGCGAGAATACCCAAAGGTTGCAAGGCGGCAGGATGGTATAT GGCCGCAATTCCGAAGTGCACGGCTGGGAAAGTGTCCGTTCATTGAGGAC CCGCCTACACAGAAGGACATTGACCGTCAACGTGCCCGTATAAAAGAGAG GACGGAGAGACAGGAAAGGGACGAAAGAGCTGTTGCTAATGCTGCTCCTG TACAAGACGTTCCGGACGCGAAACTAAATGCACCAGAAACTCATAGGAAG GTTACAAAGCACGAGGATAAGACTCCCGAATTGGGCCAAACAGAAGAGGC ACCCCTTGAGCCCCAGCCTGAACTCCAGGACATTCAGTCGACGAAACAAT TATCGCCCAGGAAAAGCTCCGAGAGCTTTGTGCCCCCGCCTCCTCAACGG AAAGGGCCATTCTTCCATGGCCGTGAACCTGCCGCATCAGGCGTACAACC CTCGAATATTACGTCCGCCATTCGTTCGCAGATGGTTTCATCGACGGCTG CTGCACCTGGTGCCAAGGCTGGCCTGAGCAAGGAAGTTCATGAACTCAAG AGAAAGGTGCTCGAAAAAGGAAATGGAGGGCTTACAGCGGGGACTATGCC TCCATCACACCACGCCGTAGATGGAGCCGCACCGTTGAAGGCGAAACCAT TGGAAAACAGCCTCGGAAATATGCAACCGCCTAAAAAGCTCGTAAATGTC CCTGAGGAGGAATCAACGCAGTTGGAAAACAACGGCGCTCCCAAGCGGCG GGCCGGTGATCGGAAAACCGTAATAATACCGAAAAGGAAGGAGAGACGGA GAGACCCTAAGCCAGGTTACTGTGAGAACTGCAGGGACAAATTCGATGAC TTCGAAGAGGTTAGTCCGGAGGCTCAAGATTCAGAAAAGAAGAATGCTAA CCTTTGGCAGCACATTGTAACTCGGAAGCACCGCCGCTTTGCGACAAACC GAGCGAACTGGGCCGAGCTCGACGCCTTACTTTATCAGCTGGAGAGGCCT GTGAAATCTGGTGCGGAAGGTGTCCCAGGTTTATAAATGGCAGCTGTATT CGTACCACCTTCGCCTCGGTCTTCGCTTAATATGTCGACTCGCCGACCAC TTGCCAACGTGCCGAATGCTACCAATTCCCCTCACAGGTCAGGCCTCGTG CCTGCCAAACGTCTACGTCCAACGAGTAACCAGATTGACATCCCTTACGG CCAGCCTCCTCCGAAGAAGCAGGTAGTGGACGGTCAGGAGGCGGACGCTC GATCCCCAACCCGGACCAGGGCGTCCGCATACCAAAACACGGACTCCAAA CTGTTCTTGCGGCGCACGAATAATGCTCAACCGAGTGCATTCGAAAGGAA ACTGGTCGCTGTGAGAGATAAAGAACGACAGGCACAAATGAAAGGCACGA GGCACGAGAGGCCTTCTGCGGAGACCCTCGATTCCATCCGGCAGTGGCAG AGGCATTACCGCAAGGCGTTTCCTCAGTTTGTTTTCTACTTTGATAGCAT CCCGGAAGATGTTCGCAGCAAGAGCTCTAGGCAGGTACTTGCATTGGGAG CG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
Term | Definition |
GO:0008270 | zinc ion binding |
GO:0003676 | nucleic acid binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
Property Name | Value |
DBxref | InterPro:IPR013939 |
DBxref | InterPro:IPR036420 |
DBxref | InterPro:IPR006572 |
DBxref | PFAM:PF08630 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
An11 | supercontig | An11:1690614..1692830 - |
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