You are here

Home

CBS51388_007063-T1, CBS51388_007063-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_007063-T1
Unique NameCBS51388_007063-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An11:1697834..1698844+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_007063-T1 ID=CBS51388_007063-T1|Name=CBS51388_007063-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1011bp|location=Sequence derived from alignment at An11:1697834..1698844+ (Aspergillus niger CBS 513.88)
ATGGCTCCTCCTGCTATTCCCGCAGCAGACCTCAGCTCATTCACCACTTA
CCTAAAAGGGTGCAGGCGAGTAATTGCCTTACTAGGAGCCGGGATCTCTG
CATCATCAGGTCTTCCCACCTTTCGAGGAGCCGGTGGTCTATGGCGATCG
TATGACGCGACGGACCTCGCAACGCCCGAGGCGTTCGATGCCAACCCAGA
CCTAGTATGGCAGTTCTACAGCTATCGAAGACACATGGCCTTGAAAGCAC
AACCGAATCGTGCACATTATGCTCTGGCTGAGCTTGCACGAAAGAACAAG
GACTTCATAACACTAAGCCAGAATGTCGATGGTGGGTAGTACTTGGGTCC
TTGCTCCGAAGTGGCACTCTACTAACTGGTTGCTTGAATTTACTCAGGCC
TTTCACAAAGGGCCAGACACCCGCCACATCAGCTTCATCTCCTTCATGGC
TCACTTTTCACCGTAAAGTGCACGTCCTTCTATTGCAGCTATTCCCGCGA
GGACTTTACCGACCCAATTGTTCCCGCTCTCGCTCTGCCAAAGAAACTTG
AACCATCTGCAACAGATAGAACGGGCGAAGAGGCTTCTCGATCTATTGCC
AGTGCATTAGGGAACAATGAGGATGAGGCTGATGTATCGGACGAGCGTGT
TCCTCTTTCCGCAGTGCCTTATGAAGAGCTTCCCCACTGCCCGGAATGCA
AAGATGGGCTTCTACGTCCTGGGGTGGTGTGGTTCGGAGAGAGTCTACCA
TCACATACGATTGATTACGTGGACGAGTGGTTGAACAAAGGAAAGGTTGA
CTTGATACTGGTAGTAGGTACAAGTTCGAGGGTGTATCCCGCGGCAGGAT
ATGTGGATAAGGCTCGCAGTAAAGGGGCTAGAGTTGCAGTGGTAAATATG
GACCGCAATGATGTTGGCTCTTCCGGATTGAAACCTGGGGATTGGTTTTT
TGAGGGCGATGCGGGTACTATTGTTCCGGAAATTTTGAAGGGAGTGATAG
GCGATATATAA
back to top

Coding sequence (CDS) from alignment at An11:1697834..1698844+

>CBS51388_007063-T1 ID=CBS51388_007063-T1|Name=CBS51388_007063-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1890bp|location=Sequence derived from alignment at An11:1697834..1698844+ (Aspergillus niger CBS 513.88)
ATGGCTCCTCCTGCTATTCCCGCAGCAGACCTCAGCTCATTCACCACTTA
CCTAAAAGGGTGCAGGCGAGTAATTGCCTTACTAGGAGCCGGGATCTCTG
CATCATCAGGTCTTCCCACCTTTCGAGGAGCCGGTGGTCTATGGCGATCG
TATGACGCGACGGACCTCGCAACGCCCGAGGCGTTCGATGCCAACCCAGA
CCTAGTATGGCAGTTCTACAGCTATCGAAGACACATGGCCTTGAAAGCAC
AACCGAATCGTGCACATTATGCTCTGGCTGAGCTTGCACGAAAGAACAAG
GACTTCATAACACTAAGCCAGAATGTCGATGGCCTTTCACAAAGGGCCAG
ACACCCGCCACATCAGCTTCATCTCCTTCATGGCTCACTTTTCACCGTAA
AGTGCACGTCCTTCTATTGCAGCTATTCCCGCGAGGACTTTACCGACCCA
ATTGTTCCCGCTCTCGCTCTGCCAAAGAAACTTGAACCATCTGCAACAGA
TAGAACGGGCGAAGAGGCTTCTCGATCTATTGCCAGTGCATTAGGGAACA
ATGAGGATGAGGCTGATGTATCGGACGAGCGTGTTCCTCTTTCCGCAGTG
CCTTATGAAGAGCTTCCCCACTGCCCGGAATGCAAAGATGGGCTTCTACG
TCCTGGGGTGGTGTGGTTCGGAGAGAGTCTACCATCACATACGATTGATT
ACGTGGACGAGTGGTTGAACAAAGGAAAGGTTGACTTGATACTGGTAGTA
GGTACAAGTTCGAGGGTGTATCCCGCGGCAGGATATGTGGATAAGGCTCG
CAGTAAAGGGGCTAGAGTTGCAGTGGTAAATATGGACCGCAATGATGTTG
GCTCTTCCGGATTGAAACCTGGGGATTGGTTTTTTGAGGGCGATGCGGGT
ACTATTGTTCCGGAAATTTTGAAGGGAGTGATAGGCGATATATAAATGGC
TCCTCCTGCTATTCCCGCAGCAGACCTCAGCTCATTCACCACTTACCTAA
AAGGGTGCAGGCGAGTAATTGCCTTACTAGGAGCCGGGATCTCTGCATCA
TCAGGTCTTCCCACCTTTCGAGGAGCCGGTGGTCTATGGCGATCGTATGA
CGCGACGGACCTCGCAACGCCCGAGGCGTTCGATGCCAACCCAGACCTAG
TATGGCAGTTCTACAGCTATCGAAGACACATGGCCTTGAAAGCACAACCG
AATCGTGCACATTATGCTCTGGCTGAGCTTGCACGAAAGAACAAGGACTT
CATAACACTAAGCCAGAATGTCGATGGCCTTTCACAAAGGGCCAGACACC
CGCCACATCAGCTTCATCTCCTTCATGGCTCACTTTTCACCGTAAAGTGC
ACGTCCTTCTATTGCAGCTATTCCCGCGAGGACTTTACCGACCCAATTGT
TCCCGCTCTCGCTCTGCCAAAGAAACTTGAACCATCTGCAACAGATAGAA
CGGGCGAAGAGGCTTCTCGATCTATTGCCAGTGCATTAGGGAACAATGAG
GATGAGGCTGATGTATCGGACGAGCGTGTTCCTCTTTCCGCAGTGCCTTA
TGAAGAGCTTCCCCACTGCCCGGAATGCAAAGATGGGCTTCTACGTCCTG
GGGTGGTGTGGTTCGGAGAGAGTCTACCATCACATACGATTGATTACGTG
GACGAGTGGTTGAACAAAGGAAAGGTTGACTTGATACTGGTAGTAGGTAC
AAGTTCGAGGGTGTATCCCGCGGCAGGATATGTGGATAAGGCTCGCAGTA
AAGGGGCTAGAGTTGCAGTGGTAAATATGGACCGCAATGATGTTGGCTCT
TCCGGATTGAAACCTGGGGATTGGTTTTTTGAGGGCGATGCGGGTACTAT
TGTTCCGGAAATTTTGAAGGGAGTGATAGGCGATATATAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0036055protein-succinyllysine desuccinylase activity
GO:0036054protein-malonyllysine demalonylase activity
GO:0070403NAD+ binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_007063CBS51388_007063Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007063-T1.exon1CBS51388_007063-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_007063-T1.exon2CBS51388_007063-T1.exon2Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007063-T1.cdsCBS51388_007063-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007063-T1CBS51388_007063-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR029035
DBxrefInterPro:IPR027546
DBxrefInterPro:IPR026590
DBxrefInterPro:IPR003000
DBxrefInterPro:IPR026591
DBxrefPFAM:PF02146
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An11supercontigAn11:1697834..1698844 +
Powered by Drupal