You are here

Home

CBS51388_007086-T1, CBS51388_007086-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_007086-T1
Unique NameCBS51388_007086-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An11:1757599..1758738-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_007086-T1 ID=CBS51388_007086-T1|Name=CBS51388_007086-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1140bp|location=Sequence derived from alignment at An11:1757599..1758738- (Aspergillus niger CBS 513.88)
ATGTCGTCGGCTAAGCCCCGCATTCTCTTCTTCAACCCCGTGAGGCACGC
AGTGCCGTTCTATGAGAAGCTCCAAGAACATGCCCAAACAGAGGTTGTGA
CAAGTAAAGGCAGGGAGGAGTTCTTCAAAGATGTCACAGGCAAATATAAA
GATATTTTTGCCATCTATCGGACATCCGCTAGCGGTGCAGTGAGTATTAC
CCTTGCCTATCCGTGATGAGATCGGACGTCCATCCGCATCAGTAATCTAA
TAAGAAACTCTGTGAAGGTAGCCGGCAAGTTCGACGCAGAACTAATCAAC
CATCTTCCCGAAAGTTGCAAATACATTTTTCACAATGGAGCAGGTAAGGT
TCCTACCTAGTACCCAAAACAGCCTCACTAAAACCAATCGCAAGGCTATG
ACCCAATCGACACGGAAGCCTGCGCCAAGCGAGGCATCATCGTCACCAAC
GCCCCAGACCCAGTCACAGATGCAACCGCTGACCTAGCAGTCCTCCTCCT
CCTGGGTGCTCTCCGAAACCTCAACCCTGCGATTCGCTCCCTCTACGCAG
GAACCTTCAAACAAGGCGTAGGTTTTGGCCACGACCCCCAAGGCAAGACG
CTAGGTATCCTCGGTATGGGCCGAATCGGTCGCGCTGTCAAACAGCGCTG
CGAGCCTTTTGGCATCAAGACCGTCTATAATAATCGACGTCCTTTATCTG
CTGATTTATCCGCGGGGGCCGAGTATGTCTCGTTTGAGAAGCTGCTCACT
GAGAGCGATATTATTAGTATTAACGTGCCCCTGAATGCGAATACAAAGCA
CTTGATTGGCGCAGCCGAGATCGCGAAAATGAAGCCCGGTATTGTTATTA
TCAATACTGCTCGTGGTGCTATTATTGATGAGGCTGCTATGGCCGATGCC
CTGGAGACTGGGCAAATCGGCGCTGTTGGGTTGGATGTGTATGAACGGGA
GCCGGAGATTAACGAGAAGCTTGCGAAGAATGAACGTGCGCTTTTGGTGC
CGCATATTGGGACGCATACGTATGAGACGCTGGCGAAGATGGAGGAGTGG
GCGATGGAGAATGCGAGACGGGCGATTATGGGTGAGGTGTTGTTGTCGCC
AGTTCCGGAGCATTCGGAGTTGGTGAATGGGAATGCTTGA
back to top

Coding sequence (CDS) from alignment at An11:1757599..1758738-

>CBS51388_007086-T1 ID=CBS51388_007086-T1|Name=CBS51388_007086-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3033bp|location=Sequence derived from alignment at An11:1757599..1758738- (Aspergillus niger CBS 513.88)
GCTATGACCCAATCGACACGGAAGCCTGCGCCAAGCGAGGCATCATCGTC
ACCAACGCCCCAGACCCAGTCACAGATGCAACCGCTGACCTAGCAGTCCT
CCTCCTCCTGGGTGCTCTCCGAAACCTCAACCCTGCGATTCGCTCCCTCT
ACGCAGGAACCTTCAAACAAGGCGTAGGTTTTGGCCACGACCCCCAAGGC
AAGACGCTAGGTATCCTCGGTATGGGCCGAATCGGTCGCGCTGTCAAACA
GCGCTGCGAGCCTTTTGGCATCAAGACCGTCTATAATAATCGACGTCCTT
TATCTGCTGATTTATCCGCGGGGGCCGAGTATGTCTCGTTTGAGAAGCTG
CTCACTGAGAGCGATATTATTAGTATTAACGTGCCCCTGAATGCGAATAC
AAAGCACTTGATTGGCGCAGCCGAGATCGCGAAAATGAAGCCCGGTATTG
TTATTATCAATACTGCTCGTGGTGCTATTATTGATGAGGCTGCTATGGCC
GATGCCCTGGAGACTGGGCAAATCGGCGCTGTTGGGTTGGATGTGTATGA
ACGGGAGCCGGAGATTAACGAGAAGCTTGCGAAGAATGAACGTGCGCTTT
TGGTGCCGCATATTGGGACGCATACGTATGAGACGCTGGCGAAGATGGAG
GAGTGGGCGATGGAGAATGCGAGACGGGCGATTATGGGTGAGGTGTTGTT
GTCGCCAGTTCCGGAGCATTCGGAGTTGGTGAATGGGAATGCTTGAGTAG
CCGGCAAGTTCGACGCAGAACTAATCAACCATCTTCCCGAAAGTTGCAAA
TACATTTTTCACAATGGAGCAGATGTCGTCGGCTAAGCCCCGCATTCTCT
TCTTCAACCCCGTGAGGCACGCAGTGCCGTTCTATGAGAAGCTCCAAGAA
CATGCCCAAACAGAGGTTGTGACAAGTAAAGGCAGGGAGGAGTTCTTCAA
AGATGTCACAGGCAAATATAAAGATATTTTTGCCATCTATCGGACATCCG
CTAGCGGTGCAGCTATGACCCAATCGACACGGAAGCCTGCGCCAAGCGAG
GCATCATCGTCACCAACGCCCCAGACCCAGTCACAGATGCAACCGCTGAC
CTAGCAGTCCTCCTCCTCCTGGGTGCTCTCCGAAACCTCAACCCTGCGAT
TCGCTCCCTCTACGCAGGAACCTTCAAACAAGGCGTAGGTTTTGGCCACG
ACCCCCAAGGCAAGACGCTAGGTATCCTCGGTATGGGCCGAATCGGTCGC
GCTGTCAAACAGCGCTGCGAGCCTTTTGGCATCAAGACCGTCTATAATAA
TCGACGTCCTTTATCTGCTGATTTATCCGCGGGGGCCGAGTATGTCTCGT
TTGAGAAGCTGCTCACTGAGAGCGATATTATTAGTATTAACGTGCCCCTG
AATGCGAATACAAAGCACTTGATTGGCGCAGCCGAGATCGCGAAAATGAA
GCCCGGTATTGTTATTATCAATACTGCTCGTGGTGCTATTATTGATGAGG
CTGCTATGGCCGATGCCCTGGAGACTGGGCAAATCGGCGCTGTTGGGTTG
GATGTGTATGAACGGGAGCCGGAGATTAACGAGAAGCTTGCGAAGAATGA
ACGTGCGCTTTTGGTGCCGCATATTGGGACGCATACGTATGAGACGCTGG
CGAAGATGGAGGAGTGGGCGATGGAGAATGCGAGACGGGCGATTATGGGT
GAGGTGTTGTTGTCGCCAGTTCCGGAGCATTCGGAGTTGGTGAATGGGAA
TGCTTGAGTAGCCGGCAAGTTCGACGCAGAACTAATCAACCATCTTCCCG
AAAGTTGCAAATACATTTTTCACAATGGAGCAGATGTCGTCGGCTAAGCC
CCGCATTCTCTTCTTCAACCCCGTGAGGCACGCAGTGCCGTTCTATGAGA
AGCTCCAAGAACATGCCCAAACAGAGGTTGTGACAAGTAAAGGCAGGGAG
GAGTTCTTCAAAGATGTCACAGGCAAATATAAAGATATTTTTGCCATCTA
TCGGACATCCGCTAGCGGTGCAGCTATGACCCAATCGACACGGAAGCCTG
CGCCAAGCGAGGCATCATCGTCACCAACGCCCCAGACCCAGTCACAGATG
CAACCGCTGACCTAGCAGTCCTCCTCCTCCTGGGTGCTCTCCGAAACCTC
AACCCTGCGATTCGCTCCCTCTACGCAGGAACCTTCAAACAAGGCGTAGG
TTTTGGCCACGACCCCCAAGGCAAGACGCTAGGTATCCTCGGTATGGGCC
GAATCGGTCGCGCTGTCAAACAGCGCTGCGAGCCTTTTGGCATCAAGACC
GTCTATAATAATCGACGTCCTTTATCTGCTGATTTATCCGCGGGGGCCGA
GTATGTCTCGTTTGAGAAGCTGCTCACTGAGAGCGATATTATTAGTATTA
ACGTGCCCCTGAATGCGAATACAAAGCACTTGATTGGCGCAGCCGAGATC
GCGAAAATGAAGCCCGGTATTGTTATTATCAATACTGCTCGTGGTGCTAT
TATTGATGAGGCTGCTATGGCCGATGCCCTGGAGACTGGGCAAATCGGCG
CTGTTGGGTTGGATGTGTATGAACGGGAGCCGGAGATTAACGAGAAGCTT
GCGAAGAATGAACGTGCGCTTTTGGTGCCGCATATTGGGACGCATACGTA
TGAGACGCTGGCGAAGATGGAGGAGTGGGCGATGGAGAATGCGAGACGGG
CGATTATGGGTGAGGTGTTGTTGTCGCCAGTTCCGGAGCATTCGGAGTTG
GTGAATGGGAATGCTTGAGTAGCCGGCAAGTTCGACGCAGAACTAATCAA
CCATCTTCCCGAAAGTTGCAAATACATTTTTCACAATGGAGCAGATGTCG
TCGGCTAAGCCCCGCATTCTCTTCTTCAACCCCGTGAGGCACGCAGTGCC
GTTCTATGAGAAGCTCCAAGAACATGCCCAAACAGAGGTTGTGACAAGTA
AAGGCAGGGAGGAGTTCTTCAAAGATGTCACAGGCAAATATAAAGATATT
TTTGCCATCTATCGGACATCCGCTAGCGGTGCA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0016616oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0051287NAD binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_007086CBS51388_007086Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007086-T1CBS51388_007086-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007086-T1.cdsCBS51388_007086-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007086-T1.exon3CBS51388_007086-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_007086-T1.exon2CBS51388_007086-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_007086-T1.exon1CBS51388_007086-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
NoteantiSMASH:Cluster_11.13
NoteSMCOG1072:dehydrogenase
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR029753
DBxrefInterPro:IPR006140
DBxrefInterPro:IPR006139
DBxrefPFAM:PF02826
DBxrefPFAM:PF00389
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An11supercontigAn11:1757599..1758738 -
Powered by Drupal