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CBS51388_007105-T1, CBS51388_007105-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_007105-T1
Unique NameCBS51388_007105-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An11:1812059..1814551+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_007105-T1 ID=CBS51388_007105-T1|Name=CBS51388_007105-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2493bp|location=Sequence derived from alignment at An11:1812059..1814551+ (Aspergillus niger CBS 513.88)
ATGCGGGAAGCAGTCGGCTATTTGTATAACTTTTGTTCAAAGCTACCTGC
CCAGCTGTATGTCAGCAACAAGCCCCTGTTCACTTACGAGCGCAATAACT
ACGGCCGATTCAGGGCGGTAGTTAAGTTGCCAAGCAACCTCGACCCTTCC
CTTCAGTCATTTTCTAGCTCAAGAAGTTGGTCCAGACTCAAGTATGCAAG
GGAGGACGCAGCATTACAAGCATATAAAGCGCTTTACCAGGCTGGCCTTG
TCAACGATTACTTAGTTCCGACTCAGGTCTCAGACCATTTGGAAGGGGAT
ATCATATTCCGGTCCCACTACAGCATTCAGAACCAGCTGGATCCTTGGCA
GGATATTGCTCTTTTATGGAAACTTGACAGTCAGCTGTATGCTCACAACC
TACGAATCATAAGACCAGAAGAGGACGAAATCCATCTACATATGATTCTT
CCAACTCAGCTTGACACAACAATTCACATTCCTCTTTTCATTGATTATTG
CACGACCTATACTGCCATTCTCACGCCGGGGCATCCAATCACTACAGACA
TTTCACTTTGCCAGCAAGTGACAAACCTGATCTTCCAGTCGGTTTACCGA
GACCATTGTTCTCGCAGAAATTTAGACTATGCGTTTCTTCTTGTCCCAGA
ATTGGAAGAAACGAAGTTGATAGAGTTCCTCGAGAGGTATTCTGGATCAG
TCAGCCTGACTGAGCTTCTGAATCAGGAAGCTACGCCGAGTGCGCTTGGA
CTGCTTCGCAGTCATACGAGACCGAGTCGACCACTTTTGGTAGAACCCTG
GGTAGCAGGAGAGTGCTTCTTACCTGATGAGTTGTCCATTTCGTCATTCG
ATGCCAAAGTCAAATACATGACTAATCGCCGGAACTTTCTCTCTCATGGA
AATCTAGCTGCTGGGAAATCAACAAACTGTGAGGCCAGGATAGGTCTTGA
AGCTAATGTGAAAAGCATGTCTGTGCGAGATTTCTTTGTTGATAAGCTAC
CTTCCATGTTTGCCCAGGTCGCCCTCTTTACACCAAGCATATCCCACGAG
GTGGAGGTATATATGATAGCGCAAATCTTGCGACAGGAATTATCTCTACG
ATCAGTGACGCCTTGGCAACGAATTGATCTATTGGCTATTGCTATCAGGC
CTACAAGTATTGAGCATCGAGCCACCTTTCGCTTATTAGCCTTCATTGGT
GATGCATTCATGAAGTATCTCTTCGCAATGCAATTGTTTTTGCACCATCA
TTTGTGGCACGAAGGTCTCCTGTCCTCGTTGAAGCAGAGGAATCTGTCTG
ATGCGGGTCTTGCACATGCTATACATCAATCTGGCCTTGGAAAATTTCTC
ATAAGCAAACATCTCAATGGGAAACGGTGGGTGCCACCACTTGTGTCGGG
GATAGAACCCGCCAGTAACGAAGCCAGGCAGCGATCCATCGGTGCGGCTA
CGCTGGCAGATATGACGAAAGCAGTTGTTGGGGCTGCCTTCACAGATGGT
GGATTGAACCAAGCTGCTGCATGCGCATCAGTTATGTTTCCCAAACTCAA
GTCCTGGAATGCATCGTCTCTGCATGATGGTACTTATTCCAAGACTAGAC
CGGAAAATGCAGTTGCTTCAACAGCAATAGTCGATATGGAAGAACTCCTT
GGATACACTTTCACCGACAAATCCCTGGCTGTGGAAAGCATGACACATCC
ATCTTGCACTGGTCTTGTTCAAACAACATCATATCGGCGTCTCTCATTTC
TCGGAGCCAGCGTGCTAGAATGGATCGTTGTGAGCTATCTACATCGACAT
GCACAAGTGATGAATCCACAAAGGATGCAGTCCTTGAAGTCCGCGTTCAC
CAACAACACATTTCTGACCTTTATAGCGATAACATTCCACCAAGTAAGGG
AGCAAAATCATATAGATGTTGATGATGAACACAATGTTCATAAAAACGTG
ACGACATGCTCAATTAGACTCTGGGATTTTCTTCGCTTGCATAGCGATGC
GTTATCCACCGAATTATCTGACTTTGTTCAGAAGTCATCTGAGAAGGCGG
ATGCTATCAAGCATGAACTATGGGAGCAGCGATTTTACCCGTGGGTGCGG
CTGAGAGCACTTGGGGACATGCGAGTGTTGTCTGATATCATTCAGAGCAT
TTTTGGTGCTGTCTTTATCGATTCTCAAGCAACCCTAGCATCCTGCGATG
CCCTGGCAGAGAAACTCGGAATCGTGCCGCTTTTGGAGCATTTCATCTCC
CATCAAATCACTACAGACCATCCAAAAGACACACTACAGGCCATCCTTCC
AGGGCGCAAAGTTTCTTATCAGATCTGTGTTGACAAGGTGCATCCCGGGA
CACTGCGGTGTTCTGCTCTGGCTGACTCCTCGGAAATTGCCTCAGTAGAA
GGCCAAATGAATGATGAGGTAATCAAGATGCAGGCAGCTGAAACGGCTGT
TCGTCTGCTGCGCAAGGGGTTTGCTTTATCCGAGACATCGTGA
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Coding sequence (CDS) from alignment at An11:1812059..1814551+

>CBS51388_007105-T1 ID=CBS51388_007105-T1|Name=CBS51388_007105-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2493bp|location=Sequence derived from alignment at An11:1812059..1814551+ (Aspergillus niger CBS 513.88)
ATGCGGGAAGCAGTCGGCTATTTGTATAACTTTTGTTCAAAGCTACCTGC
CCAGCTGTATGTCAGCAACAAGCCCCTGTTCACTTACGAGCGCAATAACT
ACGGCCGATTCAGGGCGGTAGTTAAGTTGCCAAGCAACCTCGACCCTTCC
CTTCAGTCATTTTCTAGCTCAAGAAGTTGGTCCAGACTCAAGTATGCAAG
GGAGGACGCAGCATTACAAGCATATAAAGCGCTTTACCAGGCTGGCCTTG
TCAACGATTACTTAGTTCCGACTCAGGTCTCAGACCATTTGGAAGGGGAT
ATCATATTCCGGTCCCACTACAGCATTCAGAACCAGCTGGATCCTTGGCA
GGATATTGCTCTTTTATGGAAACTTGACAGTCAGCTGTATGCTCACAACC
TACGAATCATAAGACCAGAAGAGGACGAAATCCATCTACATATGATTCTT
CCAACTCAGCTTGACACAACAATTCACATTCCTCTTTTCATTGATTATTG
CACGACCTATACTGCCATTCTCACGCCGGGGCATCCAATCACTACAGACA
TTTCACTTTGCCAGCAAGTGACAAACCTGATCTTCCAGTCGGTTTACCGA
GACCATTGTTCTCGCAGAAATTTAGACTATGCGTTTCTTCTTGTCCCAGA
ATTGGAAGAAACGAAGTTGATAGAGTTCCTCGAGAGGTATTCTGGATCAG
TCAGCCTGACTGAGCTTCTGAATCAGGAAGCTACGCCGAGTGCGCTTGGA
CTGCTTCGCAGTCATACGAGACCGAGTCGACCACTTTTGGTAGAACCCTG
GGTAGCAGGAGAGTGCTTCTTACCTGATGAGTTGTCCATTTCGTCATTCG
ATGCCAAAGTCAAATACATGACTAATCGCCGGAACTTTCTCTCTCATGGA
AATCTAGCTGCTGGGAAATCAACAAACTGTGAGGCCAGGATAGGTCTTGA
AGCTAATGTGAAAAGCATGTCTGTGCGAGATTTCTTTGTTGATAAGCTAC
CTTCCATGTTTGCCCAGGTCGCCCTCTTTACACCAAGCATATCCCACGAG
GTGGAGGTATATATGATAGCGCAAATCTTGCGACAGGAATTATCTCTACG
ATCAGTGACGCCTTGGCAACGAATTGATCTATTGGCTATTGCTATCAGGC
CTACAAGTATTGAGCATCGAGCCACCTTTCGCTTATTAGCCTTCATTGGT
GATGCATTCATGAAGTATCTCTTCGCAATGCAATTGTTTTTGCACCATCA
TTTGTGGCACGAAGGTCTCCTGTCCTCGTTGAAGCAGAGGAATCTGTCTG
ATGCGGGTCTTGCACATGCTATACATCAATCTGGCCTTGGAAAATTTCTC
ATAAGCAAACATCTCAATGGGAAACGGTGGGTGCCACCACTTGTGTCGGG
GATAGAACCCGCCAGTAACGAAGCCAGGCAGCGATCCATCGGTGCGGCTA
CGCTGGCAGATATGACGAAAGCAGTTGTTGGGGCTGCCTTCACAGATGGT
GGATTGAACCAAGCTGCTGCATGCGCATCAGTTATGTTTCCCAAACTCAA
GTCCTGGAATGCATCGTCTCTGCATGATGGTACTTATTCCAAGACTAGAC
CGGAAAATGCAGTTGCTTCAACAGCAATAGTCGATATGGAAGAACTCCTT
GGATACACTTTCACCGACAAATCCCTGGCTGTGGAAAGCATGACACATCC
ATCTTGCACTGGTCTTGTTCAAACAACATCATATCGGCGTCTCTCATTTC
TCGGAGCCAGCGTGCTAGAATGGATCGTTGTGAGCTATCTACATCGACAT
GCACAAGTGATGAATCCACAAAGGATGCAGTCCTTGAAGTCCGCGTTCAC
CAACAACACATTTCTGACCTTTATAGCGATAACATTCCACCAAGTAAGGG
AGCAAAATCATATAGATGTTGATGATGAACACAATGTTCATAAAAACGTG
ACGACATGCTCAATTAGACTCTGGGATTTTCTTCGCTTGCATAGCGATGC
GTTATCCACCGAATTATCTGACTTTGTTCAGAAGTCATCTGAGAAGGCGG
ATGCTATCAAGCATGAACTATGGGAGCAGCGATTTTACCCGTGGGTGCGG
CTGAGAGCACTTGGGGACATGCGAGTGTTGTCTGATATCATTCAGAGCAT
TTTTGGTGCTGTCTTTATCGATTCTCAAGCAACCCTAGCATCCTGCGATG
CCCTGGCAGAGAAACTCGGAATCGTGCCGCTTTTGGAGCATTTCATCTCC
CATCAAATCACTACAGACCATCCAAAAGACACACTACAGGCCATCCTTCC
AGGGCGCAAAGTTTCTTATCAGATCTGTGTTGACAAGGTGCATCCCGGGA
CACTGCGGTGTTCTGCTCTGGCTGACTCCTCGGAAATTGCCTCAGTAGAA
GGCCAAATGAATGATGAGGTAATCAAGATGCAGGCAGCTGAAACGGCTGT
TCGTCTGCTGCGCAAGGGGTTTGCTTTATCCGAGACATCGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006396RNA processing
Vocabulary: Molecular Function
TermDefinition
GO:0016891endoribonuclease activity, producing 5'-phosphomonoesters
GO:0004525ribonuclease III activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
DCL22CBS51388_007105Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007105-T1.exon1CBS51388_007105-T1.exon1Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007105-T1.cdsCBS51388_007105-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007105-T1CBS51388_007105-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036389
DBxrefInterPro:IPR005034
DBxrefInterPro:IPR038248
DBxrefInterPro:IPR000999
DBxrefPFAM:PF00636
DBxrefPFAM:PF03368
ProductDicer-like protein 2-2
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An11supercontigAn11:1812059..1814551 +
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