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Sequences
The following sequences are available for this feature:
mRNA from alignment at An11:1818264..1820438- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_007106-T1 ID=CBS51388_007106-T1|Name=CBS51388_007106-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2175bp|location=Sequence derived from alignment at An11:1818264..1820438- (Aspergillus niger CBS 513.88)
ATGCCTTCTCTGCGGCGGCGCAACGGTCGCAGGGCTGCCTGTGAGGCCTG
TCGCAGACGGAAACTAGCTTGTGACCACAATCAGCCGACATGTCATCGAT
GCCAGAAGCATTCACTCGAATGTATCTACCTGTCACAGTCGAACAGAACA
AAATGCGGGGTCTCGGAGGGAGCTTCACAATCACTTGCAGGATCAGGTGC
CTCCTTTCCTGAGGTGCATGCGACATCCGCAGAGAACCACCGGGTTGCGG
ACCGGAGCACGCCCCTAATCGACAGCCCGAACGAGTACCTGGGACCGACG
AGCTTTACCTCAGTCTTTGTGGAGCATGGTGATTGTTTTGAGTTGGAGGA
CACGAACAGAACTTCAGAAATAAGACGAGACTCGGCTCCAGACCCCCAAG
TAGACACACCACTTGTGCAGCTCGGCGCCCGTATTCTGAGCCAGTTACCG
GAGGAGCGCGACTGCTCCACACTCTTCTCGAGCCACATCAATCCCAATGA
TGGCTGGATCCGACTGGCAGGGCGTCACGCATTGGACAGAATGTGGGACG
CTTTCCGTCCGGCGCTACGACGACGGTTGGAAGAAGACATGCTGGAAACT
GCTACGATTCTCACGCGGAATAGCAGAACCCCGCTACAAAAGAAACAGGA
TCCGCAGGCCTGGCTGACCTCCTTTACAGGGACACAGATGCGATGGGAAA
CTATTGGCATCCTGTATACCTACTGGGCTTGCGGAGCAATCTCCCCGTCG
TCGGAGAGTCAAGCTGTCGCCCGGTATTGCCAGGGACATCCATATGTTAC
GAACACCAAGCAATTGATGGCTCGTTTCAAACACTGTGCGTTTTTATGCA
TCGATCTATGCAAGCAGCTTGGCTCCGTCAATCTTCTCTTTGTGTATCTG
TTGTACAAGCATAATATTTTGGAAGGGATCTTGAGCGGGGACAAGAGTAG
GTCATATTACTGACCAAATATGCCTCTGGTCTAACCGAACGAAGGTTTCT
CCCACTGGACACAGCACGGCGAGCTAGTGGCCGTGACCACTTCACTCGGA
CTTCATCGCGAACATTCAACAGAGACAGAAACTATTAGTCTCCAACACGA
ACTCAAGAGGAGGCTGTATGCCGCTGTTTTCAACATTGACAAGGTCATTT
CGACCTTCACTGGGCGACCGCCTCTTTTGAGTCAAGCATATTCATCTACC
AGACTGCCACTAGATCTGAGTGATGATGCCCTGCTATCTGGCAATCTCCC
ATCTGCCGCTGCGCAGCTAGACCCCAACGGATGGAACACAGACAACCAGA
TCTACTCTACTACAATTCTCCGATCCCGCACAAGCTTCGCCCGGATCCGC
CATGAAATTTTGGAGCTTTTGGAAGGTTCGATGGATAATCTAGCTGATGG
ATCTGTCGATAAAGCCATGTACGTTACTCCAACCCACGCACATACTTTCT
AACACTAGTATCAGGAAACTAAAGCAACGAACCCATGATACTTACACGCA
ACTTCCATCAATAATTCAATTCTCGGAGTCAGAGCTCAGCAACACCAACG
TTCCCGGATATATCCTCTACGCGCAGATACTCACGCGTCTCGAATGTCTT
CTGAGTTTATTTTTGTTGGAACGGCTGTTGAAGCGACACCATATCGTCAC
CGAGCAAGACCTCGTCGAAGTGAGTCATGAAATGCTGGACTTGACCTTGA
TCTTCTGGAAGAAGAAAGACCGGTTTGTTGGTCTATACGCTGACTTCGAG
TGGCTGGTACGTATTGCGGATCCCCTGTGTGTGTGTGCAAAGTTGATTAT
CTCTAATACAACTATAAGACCATGTCATACGCTGTTCCAGCCAGCGGCAT
CCTCTGTCTGCAGTTGCTGCGACAAGCCACCCATCCGCATAGCTATCAAA
CACGCCTCCCACGATCGGCAATAATTCAGAACCTTAGTCTGCTGGTACTG
TGTCTGGACTGGATTGAGACTGAGGCCTCTTGCAGGAGCATGGTATCTTT
CATCCGAAGGATCATAAGTCGATCTCTGGACCGGATATTGGATCCTGATC
CGCTAGGGGCTGAGCAGCTGCAATCTGTCAGGTCGTTGCTAAATGATGAG
CTTCTGCAATATCCGCATTTAGAGCTGCTGAACACGTTTGGCTGGGTTGA
TTGGGATGGGGGTGTTAGCGGTTGA back to topCoding sequence (CDS) from alignment at An11:1818264..1820438- >CBS51388_007106-T1 ID=CBS51388_007106-T1|Name=CBS51388_007106-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=7632bp|location=Sequence derived from alignment at An11:1818264..1820438- (Aspergillus niger CBS 513.88)
ACCATGTCATACGCTGTTCCAGCCAGCGGCATCCTCTGTCTGCAGTTGCT
GCGACAAGCCACCCATCCGCATAGCTATCAAACACGCCTCCCACGATCGG
CAATAATTCAGAACCTTAGTCTGCTGGTACTGTGTCTGGACTGGATTGAG
ACTGAGGCCTCTTGCAGGAGCATGGTATCTTTCATCCGAAGGATCATAAG
TCGATCTCTGGACCGGATATTGGATCCTGATCCGCTAGGGGCTGAGCAGC
TGCAATCTGTCAGGTCGTTGCTAAATGATGAGCTTCTGCAATATCCGCAT
TTAGAGCTGCTGAACACGTTTGGCTGGGTTGATTGGGATGGGGGTGTTAG
CGGTTGAGAAACTAAAGCAACGAACCCATGATACTTACACGCAACTTCCA
TCAATAATTCAATTCTCGGAGTCAGAGCTCAGCAACACCAACGTTCCCGG
ATATATCCTCTACGCGCAGATACTCACGCGTCTCGAATGTCTTCTGAGTT
TATTTTTGTTGGAACGGCTGTTGAAGCGACACCATATCGTCACCGAGCAA
GACCTCGTCGAAGTGAGTCATGAAATGCTGGACTTGACCTTGATCTTCTG
GAAGAAGAAAGACCGGTTTGTTGGTCTATACGCTGACTTCGAGTGGCTGG
TTTCTCCCACTGGACACAGCACGGCGAGCTAGTGGCCGTGACCACTTCAC
TCGGACTTCATCGCGAACATTCAACAGAGACAGAAACTATTAGTCTCCAA
CACGAACTCAAGAGGAGGCTGTATGCCGCTGTTTTCAACATTGACAAGGT
CATTTCGACCTTCACTGGGCGACCGCCTCTTTTGAGTCAAGCATATTCAT
CTACCAGACTGCCACTAGATCTGAGTGATGATGCCCTGCTATCTGGCAAT
CTCCCATCTGCCGCTGCGCAGCTAGACCCCAACGGATGGAACACAGACAA
CCAGATCTACTCTACTACAATTCTCCGATCCCGCACAAGCTTCGCCCGGA
TCCGCCATGAAATTTTGGAGCTTTTGGAAGGTTCGATGGATAATCTAGCT
GATGGATCTGTCGATAAAGCCATATGCCTTCTCTGCGGCGGCGCAACGGT
CGCAGGGCTGCCTGTGAGGCCTGTCGCAGACGGAAACTAGCTTGTGACCA
CAATCAGCCGACATGTCATCGATGCCAGAAGCATTCACTCGAATGTATCT
ACCTGTCACAGTCGAACAGAACAAAATGCGGGGTCTCGGAGGGAGCTTCA
CAATCACTTGCAGGATCAGGTGCCTCCTTTCCTGAGGTGCATGCGACATC
CGCAGAGAACCACCGGGTTGCGGACCGGAGCACGCCCCTAATCGACAGCC
CGAACGAGTACCTGGGACCGACGAGCTTTACCTCAGTCTTTGTGGAGCAT
GGTGATTGTTTTGAGTTGGAGGACACGAACAGAACTTCAGAAATAAGACG
AGACTCGGCTCCAGACCCCCAAGTAGACACACCACTTGTGCAGCTCGGCG
CCCGTATTCTGAGCCAGTTACCGGAGGAGCGCGACTGCTCCACACTCTTC
TCGAGCCACATCAATCCCAATGATGGCTGGATCCGACTGGCAGGGCGTCA
CGCATTGGACAGAATGTGGGACGCTTTCCGTCCGGCGCTACGACGACGGT
TGGAAGAAGACATGCTGGAAACTGCTACGATTCTCACGCGGAATAGCAGA
ACCCCGCTACAAAAGAAACAGGATCCGCAGGCCTGGCTGACCTCCTTTAC
AGGGACACAGATGCGATGGGAAACTATTGGCATCCTGTATACCTACTGGG
CTTGCGGAGCAATCTCCCCGTCGTCGGAGAGTCAAGCTGTCGCCCGGTAT
TGCCAGGGACATCCATATGTTACGAACACCAAGCAATTGATGGCTCGTTT
CAAACACTACCATGTCATACGCTGTTCCAGCCAGCGGCATCCTCTGTCTG
CAGTTGCTGCGACAAGCCACCCATCCGCATAGCTATCAAACACGCCTCCC
ACGATCGGCAATAATTCAGAACCTTAGTCTGCTGGTACTGTGTCTGGACT
GGATTGAGACTGAGGCCTCTTGCAGGAGCATGGTATCTTTCATCCGAAGG
ATCATAAGTCGATCTCTGGACCGGATATTGGATCCTGATCCGCTAGGGGC
TGAGCAGCTGCAATCTGTCAGGTCGTTGCTAAATGATGAGCTTCTGCAAT
ATCCGCATTTAGAGCTGCTGAACACGTTTGGCTGGGTTGATTGGGATGGG
GGTGTTAGCGGTTGAGAAACTAAAGCAACGAACCCATGATACTTACACGC
AACTTCCATCAATAATTCAATTCTCGGAGTCAGAGCTCAGCAACACCAAC
GTTCCCGGATATATCCTCTACGCGCAGATACTCACGCGTCTCGAATGTCT
TCTGAGTTTATTTTTGTTGGAACGGCTGTTGAAGCGACACCATATCGTCA
CCGAGCAAGACCTCGTCGAAGTGAGTCATGAAATGCTGGACTTGACCTTG
ATCTTCTGGAAGAAGAAAGACCGGTTTGTTGGTCTATACGCTGACTTCGA
GTGGCTGGTTTCTCCCACTGGACACAGCACGGCGAGCTAGTGGCCGTGAC
CACTTCACTCGGACTTCATCGCGAACATTCAACAGAGACAGAAACTATTA
GTCTCCAACACGAACTCAAGAGGAGGCTGTATGCCGCTGTTTTCAACATT
GACAAGGTCATTTCGACCTTCACTGGGCGACCGCCTCTTTTGAGTCAAGC
ATATTCATCTACCAGACTGCCACTAGATCTGAGTGATGATGCCCTGCTAT
CTGGCAATCTCCCATCTGCCGCTGCGCAGCTAGACCCCAACGGATGGAAC
ACAGACAACCAGATCTACTCTACTACAATTCTCCGATCCCGCACAAGCTT
CGCCCGGATCCGCCATGAAATTTTGGAGCTTTTGGAAGGTTCGATGGATA
ATCTAGCTGATGGATCTGTCGATAAAGCCATATGCCTTCTCTGCGGCGGC
GCAACGGTCGCAGGGCTGCCTGTGAGGCCTGTCGCAGACGGAAACTAGCT
TGTGACCACAATCAGCCGACATGTCATCGATGCCAGAAGCATTCACTCGA
ATGTATCTACCTGTCACAGTCGAACAGAACAAAATGCGGGGTCTCGGAGG
GAGCTTCACAATCACTTGCAGGATCAGGTGCCTCCTTTCCTGAGGTGCAT
GCGACATCCGCAGAGAACCACCGGGTTGCGGACCGGAGCACGCCCCTAAT
CGACAGCCCGAACGAGTACCTGGGACCGACGAGCTTTACCTCAGTCTTTG
TGGAGCATGGTGATTGTTTTGAGTTGGAGGACACGAACAGAACTTCAGAA
ATAAGACGAGACTCGGCTCCAGACCCCCAAGTAGACACACCACTTGTGCA
GCTCGGCGCCCGTATTCTGAGCCAGTTACCGGAGGAGCGCGACTGCTCCA
CACTCTTCTCGAGCCACATCAATCCCAATGATGGCTGGATCCGACTGGCA
GGGCGTCACGCATTGGACAGAATGTGGGACGCTTTCCGTCCGGCGCTACG
ACGACGGTTGGAAGAAGACATGCTGGAAACTGCTACGATTCTCACGCGGA
ATAGCAGAACCCCGCTACAAAAGAAACAGGATCCGCAGGCCTGGCTGACC
TCCTTTACAGGGACACAGATGCGATGGGAAACTATTGGCATCCTGTATAC
CTACTGGGCTTGCGGAGCAATCTCCCCGTCGTCGGAGAGTCAAGCTGTCG
CCCGGTATTGCCAGGGACATCCATATGTTACGAACACCAAGCAATTGATG
GCTCGTTTCAAACACTACCATGTCATACGCTGTTCCAGCCAGCGGCATCC
TCTGTCTGCAGTTGCTGCGACAAGCCACCCATCCGCATAGCTATCAAACA
CGCCTCCCACGATCGGCAATAATTCAGAACCTTAGTCTGCTGGTACTGTG
TCTGGACTGGATTGAGACTGAGGCCTCTTGCAGGAGCATGGTATCTTTCA
TCCGAAGGATCATAAGTCGATCTCTGGACCGGATATTGGATCCTGATCCG
CTAGGGGCTGAGCAGCTGCAATCTGTCAGGTCGTTGCTAAATGATGAGCT
TCTGCAATATCCGCATTTAGAGCTGCTGAACACGTTTGGCTGGGTTGATT
GGGATGGGGGTGTTAGCGGTTGAGAAACTAAAGCAACGAACCCATGATAC
TTACACGCAACTTCCATCAATAATTCAATTCTCGGAGTCAGAGCTCAGCA
ACACCAACGTTCCCGGATATATCCTCTACGCGCAGATACTCACGCGTCTC
GAATGTCTTCTGAGTTTATTTTTGTTGGAACGGCTGTTGAAGCGACACCA
TATCGTCACCGAGCAAGACCTCGTCGAAGTGAGTCATGAAATGCTGGACT
TGACCTTGATCTTCTGGAAGAAGAAAGACCGGTTTGTTGGTCTATACGCT
GACTTCGAGTGGCTGGTTTCTCCCACTGGACACAGCACGGCGAGCTAGTG
GCCGTGACCACTTCACTCGGACTTCATCGCGAACATTCAACAGAGACAGA
AACTATTAGTCTCCAACACGAACTCAAGAGGAGGCTGTATGCCGCTGTTT
TCAACATTGACAAGGTCATTTCGACCTTCACTGGGCGACCGCCTCTTTTG
AGTCAAGCATATTCATCTACCAGACTGCCACTAGATCTGAGTGATGATGC
CCTGCTATCTGGCAATCTCCCATCTGCCGCTGCGCAGCTAGACCCCAACG
GATGGAACACAGACAACCAGATCTACTCTACTACAATTCTCCGATCCCGC
ACAAGCTTCGCCCGGATCCGCCATGAAATTTTGGAGCTTTTGGAAGGTTC
GATGGATAATCTAGCTGATGGATCTGTCGATAAAGCCATATGCCTTCTCT
GCGGCGGCGCAACGGTCGCAGGGCTGCCTGTGAGGCCTGTCGCAGACGGA
AACTAGCTTGTGACCACAATCAGCCGACATGTCATCGATGCCAGAAGCAT
TCACTCGAATGTATCTACCTGTCACAGTCGAACAGAACAAAATGCGGGGT
CTCGGAGGGAGCTTCACAATCACTTGCAGGATCAGGTGCCTCCTTTCCTG
AGGTGCATGCGACATCCGCAGAGAACCACCGGGTTGCGGACCGGAGCACG
CCCCTAATCGACAGCCCGAACGAGTACCTGGGACCGACGAGCTTTACCTC
AGTCTTTGTGGAGCATGGTGATTGTTTTGAGTTGGAGGACACGAACAGAA
CTTCAGAAATAAGACGAGACTCGGCTCCAGACCCCCAAGTAGACACACCA
CTTGTGCAGCTCGGCGCCCGTATTCTGAGCCAGTTACCGGAGGAGCGCGA
CTGCTCCACACTCTTCTCGAGCCACATCAATCCCAATGATGGCTGGATCC
GACTGGCAGGGCGTCACGCATTGGACAGAATGTGGGACGCTTTCCGTCCG
GCGCTACGACGACGGTTGGAAGAAGACATGCTGGAAACTGCTACGATTCT
CACGCGGAATAGCAGAACCCCGCTACAAAAGAAACAGGATCCGCAGGCCT
GGCTGACCTCCTTTACAGGGACACAGATGCGATGGGAAACTATTGGCATC
CTGTATACCTACTGGGCTTGCGGAGCAATCTCCCCGTCGTCGGAGAGTCA
AGCTGTCGCCCGGTATTGCCAGGGACATCCATATGTTACGAACACCAAGC
AATTGATGGCTCGTTTCAAACACTACCATGTCATACGCTGTTCCAGCCAG
CGGCATCCTCTGTCTGCAGTTGCTGCGACAAGCCACCCATCCGCATAGCT
ATCAAACACGCCTCCCACGATCGGCAATAATTCAGAACCTTAGTCTGCTG
GTACTGTGTCTGGACTGGATTGAGACTGAGGCCTCTTGCAGGAGCATGGT
ATCTTTCATCCGAAGGATCATAAGTCGATCTCTGGACCGGATATTGGATC
CTGATCCGCTAGGGGCTGAGCAGCTGCAATCTGTCAGGTCGTTGCTAAAT
GATGAGCTTCTGCAATATCCGCATTTAGAGCTGCTGAACACGTTTGGCTG
GGTTGATTGGGATGGGGGTGTTAGCGGTTGAGAAACTAAAGCAACGAACC
CATGATACTTACACGCAACTTCCATCAATAATTCAATTCTCGGAGTCAGA
GCTCAGCAACACCAACGTTCCCGGATATATCCTCTACGCGCAGATACTCA
CGCGTCTCGAATGTCTTCTGAGTTTATTTTTGTTGGAACGGCTGTTGAAG
CGACACCATATCGTCACCGAGCAAGACCTCGTCGAAGTGAGTCATGAAAT
GCTGGACTTGACCTTGATCTTCTGGAAGAAGAAAGACCGGTTTGTTGGTC
TATACGCTGACTTCGAGTGGCTGGTTTCTCCCACTGGACACAGCACGGCG
AGCTAGTGGCCGTGACCACTTCACTCGGACTTCATCGCGAACATTCAACA
GAGACAGAAACTATTAGTCTCCAACACGAACTCAAGAGGAGGCTGTATGC
CGCTGTTTTCAACATTGACAAGGTCATTTCGACCTTCACTGGGCGACCGC
CTCTTTTGAGTCAAGCATATTCATCTACCAGACTGCCACTAGATCTGAGT
GATGATGCCCTGCTATCTGGCAATCTCCCATCTGCCGCTGCGCAGCTAGA
CCCCAACGGATGGAACACAGACAACCAGATCTACTCTACTACAATTCTCC
GATCCCGCACAAGCTTCGCCCGGATCCGCCATGAAATTTTGGAGCTTTTG
GAAGGTTCGATGGATAATCTAGCTGATGGATCTGTCGATAAAGCCATATG
CCTTCTCTGCGGCGGCGCAACGGTCGCAGGGCTGCCTGTGAGGCCTGTCG
CAGACGGAAACTAGCTTGTGACCACAATCAGCCGACATGTCATCGATGCC
AGAAGCATTCACTCGAATGTATCTACCTGTCACAGTCGAACAGAACAAAA
TGCGGGGTCTCGGAGGGAGCTTCACAATCACTTGCAGGATCAGGTGCCTC
CTTTCCTGAGGTGCATGCGACATCCGCAGAGAACCACCGGGTTGCGGACC
GGAGCACGCCCCTAATCGACAGCCCGAACGAGTACCTGGGACCGACGAGC
TTTACCTCAGTCTTTGTGGAGCATGGTGATTGTTTTGAGTTGGAGGACAC
GAACAGAACTTCAGAAATAAGACGAGACTCGGCTCCAGACCCCCAAGTAG
ACACACCACTTGTGCAGCTCGGCGCCCGTATTCTGAGCCAGTTACCGGAG
GAGCGCGACTGCTCCACACTCTTCTCGAGCCACATCAATCCCAATGATGG
CTGGATCCGACTGGCAGGGCGTCACGCATTGGACAGAATGTGGGACGCTT
TCCGTCCGGCGCTACGACGACGGTTGGAAGAAGACATGCTGGAAACTGCT
ACGATTCTCACGCGGAATAGCAGAACCCCGCTACAAAAGAAACAGGATCC
GCAGGCCTGGCTGACCTCCTTTACAGGGACACAGATGCGATGGGAAACTA
TTGGCATCCTGTATACCTACTGGGCTTGCGGAGCAATCTCCCCGTCGTCG
GAGAGTCAAGCTGTCGCCCGGTATTGCCAGGGACATCCATATGTTACGAA
CACCAAGCAATTGATGGCTCGTTTCAAACACT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
| GO:0042025 | host cell nucleus |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003677 | DNA binding |
| GO:0008270 | zinc ion binding |
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006351 | transcription, DNA-templated |
| GO:0006355 | regulation of transcription, DNA-templated |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR007219 |
| DBxref | InterPro:IPR001138 |
| DBxref | PFAM:PF00172 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An11 | supercontig | An11:1818264..1820438 - |
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