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Sequences
The following sequences are available for this feature:
mRNA from alignment at An11:1827591..1830177+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_007109-T1 ID=CBS51388_007109-T1|Name=CBS51388_007109-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2587bp|location=Sequence derived from alignment at An11:1827591..1830177+ (Aspergillus niger CBS 513.88)
ATGCCGGGCCACTCCCGCAGTCGGGACCGGTTGAGTCCCAGCAGCGAGCT
GGACGATGCCGATCCCGTTTACTCTCCTTCGGTGTACCAGAGAGAGCATT
ATTATAACAATGATTCGTTGTTTGACTCCGCTGACGATGATTACACCCGT
ACACCACGAAATGTCTATAGTTACGAAACCCATGATGAATATCACGATGA
TGACGATGACGATGACGATGTCCATGAGCATGACCACGACCATGAATACG
ATGATAAGTTTGAGGAGCCTTGGGTTCCGTTGCGCGCTCAGGTCGAGGGT
GATCAGTGGAGAGAGGGGTTCGAGACTGCCATACCTAAGGAAGAGGATGT
CACTCAAGCAAAGGAGTATCAGTACCAGATGAGCGGGGCGCTTGGTGATG
ATGGACCTCCTCCGCTGCCGTCTGATGCGTTGGGTAGGGGAAAGGGAAAG
AAGCGATTGGATCGGGAGACGCGACGGCAGAGGAGGAAAGAGAGGCTTGC
GGCATTCTTCAAGCATAAGAATGGTAGTGCGTCGGCAGGATTGGTCAGCG
GGGATGCTCTGGCAAAGCTGCTTGGGTCACAGGATGGAGATGAGGATTGT
TTGAGTCATTTGGGTACTGAGCGTGCGGACTCGATGTCGCAGAAGAATTT
AGAAGGGGGAAGGCAAAGGAAGCTCCCAGTGCTGAGTGAGGAGCCGATGA
TGCTTCGGCCGTTTCCAGCGGTAGCGCCGACCGGACAGACACAGGGACGG
GTGGTCTCTGGGGCGCAGTTGGAAGAGGGAGGCCCCGGTATGGAGATGCG
ACATCGTGGTGGAGGTGGGCCGCCTGCAGAGGGGTTGCTTCAGAAAGAGG
GTGATTGGGACGGAAGCACGAAAGGTTCTTCTACTTCTGCACGGCCGTCG
TTCTGGAAGCGATATCATAAAACGTTCATCTTCTTTGCGATCTTGATAGT
GCTGGCAGCTATTGCGATTCCTGTGGGGATCATCGAGGCAAGAAGGCTTC
ATGGGACGAGTGGAGGCGATAATTCTTCGAATTCTAATCTGAAAGGGATT
AGTCGCGATAGCATTCCGGTAGGTTTGTCTTTTACTTGCCTCTTGGTGAT
ACTGACGATATCAGGCTTACGCTAGAGGGACGTACCTGGATCCCTTTACA
TGGTACGACACCACGGATTTTAATGTGACGTTCACAAATGCTACAGTGGG
TGGACTGTCTATCATGGGACTGAACTCGACATGGAACGACTCAGCCCAAG
CAAATGAGAACGTGCCACCCTTAAATGAGAAGTTTCCGTACGGGTCGCAA
CCTATTCGCGGTGTCAACCTTGGAGGTTGGTTGTCGATCGAGCCCTTCAT
CGTCCCTTCGCTTTTCGATACCTACACTTCAAGCGAAGGGATCATCGACG
AGTGGACACTATCTGAGAAACTAGGCGATTCAGCCGCCTCAGTCATCGAA
AAGCACTATGCCACCTTCATCACCGAGCAAGACTTTGCTGACATCAGAGA
TGCCGGTCTCGATCACGTCCGGATCCAGTTCTCATACTGGGCCATCAAGA
CATACGATGGCGATCCGTATGTCCCAAAAATCGCATGGCGGTACCTCCTC
AGAGCCATCGAATACTGCCGCAAATACGGTCTCCGAGTCAACCTCGATCC
CCACGGTATTCCAGGGAGCCAGAACGGCTGGAACCACAGTGGCCGACAGG
GCACAATCGGCTGGCTAAATGGAACCGACGGGGAACTTAACCGACAACGA
TCTCTCGAAATGCATGACCAGCTCTCGCAATTCTTCGCACAGGACCGATA
CAAGAATGTTGTAACGATTTACGGCCTCGTAAACGAACCGCTCATGCTTT
CCCTCCCTGTCGAAAAAGTCCTCAATTGGACCACAGAAGCCACCAATCTA
GTCCAGAAGAACGGCATTAAAGCATGGGTCACCGTCCACGATGGCTTCCT
CAACCTAGACAAATGGGACAAGATGCTCAAAACCCGACCGAGTAATATGA
TGCTTGATACCCACCAATATACCGTCTTCAACACGGGCGAAATCGTCCTC
AATCACACCAGAAGAGTAGAGCTCATCTGTGAAAGCTGGTACTCTATGAT
CCAGCAGATCAACATTACCAGCACGGGGTTCGTATCTTCCCTTTCCCATG
CATACAATTTACTGACCTTATCTAGATGGGGTCCGACCATTTGCGGCGAA
TGGTCGCAAGCAGACACCGACTGCGCTCAATACGTGAACAACGTCGGTCG
CGGTACTCGTTGGGAAGGCACTTTTTCTCTTACCGACTCGACTCAGTACT
GTCCCACAGCGAGCGAGGGGACCTGCAGCTGCACGCAAGCGAATGCTGTC
CCTGGCGTCTACTCGGAGGGATACAAGACCTTTCTCCAGACCTACGCCGA
AGCACAGATGTCGGCGTTTGAGTCCGCTATGGGGTGGTTCTACTGGACTT
GGGCAACGGAGTCTGCAGCGCAGTGGAGCTATAGGACGGCGTGGAAGAAC
GGCTACATGCCGAAGAAGGCCTATAGCCCGTCATTTAAGTGCGGGGATAC
CATCCCTAGTTTTGGCAATCTGCCGGAGTATTATTGA back to topCoding sequence (CDS) from alignment at An11:1827591..1830177+ >CBS51388_007109-T1 ID=CBS51388_007109-T1|Name=CBS51388_007109-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=7479bp|location=Sequence derived from alignment at An11:1827591..1830177+ (Aspergillus niger CBS 513.88)
ATGCCGGGCCACTCCCGCAGTCGGGACCGGTTGAGTCCCAGCAGCGAGCT
GGACGATGCCGATCCCGTTTACTCTCCTTCGGTGTACCAGAGAGAGCATT
ATTATAACAATGATTCGTTGTTTGACTCCGCTGACGATGATTACACCCGT
ACACCACGAAATGTCTATAGTTACGAAACCCATGATGAATATCACGATGA
TGACGATGACGATGACGATGTCCATGAGCATGACCACGACCATGAATACG
ATGATAAGTTTGAGGAGCCTTGGGTTCCGTTGCGCGCTCAGGTCGAGGGT
GATCAGTGGAGAGAGGGGTTCGAGACTGCCATACCTAAGGAAGAGGATGT
CACTCAAGCAAAGGAGTATCAGTACCAGATGAGCGGGGCGCTTGGTGATG
ATGGACCTCCTCCGCTGCCGTCTGATGCGTTGGGTAGGGGAAAGGGAAAG
AAGCGATTGGATCGGGAGACGCGACGGCAGAGGAGGAAAGAGAGGCTTGC
GGCATTCTTCAAGCATAAGAATGGTAGTGCGTCGGCAGGATTGGTCAGCG
GGGATGCTCTGGCAAAGCTGCTTGGGTCACAGGATGGAGATGAGGATTGT
TTGAGTCATTTGGGTACTGAGCGTGCGGACTCGATGTCGCAGAAGAATTT
AGAAGGGGGAAGGCAAAGGAAGCTCCCAGTGCTGAGTGAGGAGCCGATGA
TGCTTCGGCCGTTTCCAGCGGTAGCGCCGACCGGACAGACACAGGGACGG
GTGGTCTCTGGGGCGCAGTTGGAAGAGGGAGGCCCCGGTATGGAGATGCG
ACATCGTGGTGGAGGTGGGCCGCCTGCAGAGGGGTTGCTTCAGAAAGAGG
GTGATTGGGACGGAAGCACGAAAGGTTCTTCTACTTCTGCACGGCCGTCG
TTCTGGAAGCGATATCATAAAACGTTCATCTTCTTTGCGATCTTGATAGT
GCTGGCAGCTATTGCGATTCCTGTGGGGATCATCGAGGCAAGAAGGCTTC
ATGGGACGAGTGGAGGCGATAATTCTTCGAATTCTAATCTGAAAGGGATT
AGTCGCGATAGCATTCCGGCTTACGCTAGAGGGACGTACCTGGATCCCTT
TACATGGTACGACACCACGGATTTTAATGTGACGTTCACAAATGCTACAG
TGGGTGGACTGTCTATCATGGGACTGAACTCGACATGGAACGACTCAGCC
CAAGCAAATGAGAACGTGCCACCCTTAAATGAGAAGTTTCCGTACGGGTC
GCAACCTATTCGCGGTGTCAACCTTGGAGGTTGGTTGTCGATCGAGCCCT
TCATCGTCCCTTCGCTTTTCGATACCTACACTTCAAGCGAAGGGATCATC
GACGAGTGGACACTATCTGAGAAACTAGGCGATTCAGCCGCCTCAGTCAT
CGAAAAGCACTATGCCACCTTCATCACCGAGCAAGACTTTGCTGACATCA
GAGATGCCGGTCTCGATCACGTCCGGATCCAGTTCTCATACTGGGCCATC
AAGACATACGATGGCGATCCGTATGTCCCAAAAATCGCATGGCGGTACCT
CCTCAGAGCCATCGAATACTGCCGCAAATACGGTCTCCGAGTCAACCTCG
ATCCCCACGGTATTCCAGGGAGCCAGAACGGCTGGAACCACAGTGGCCGA
CAGGGCACAATCGGCTGGCTAAATGGAACCGACGGGGAACTTAACCGACA
ACGATCTCTCGAAATGCATGACCAGCTCTCGCAATTCTTCGCACAGGACC
GATACAAGAATGTTGTAACGATTTACGGCCTCGTAAACGAACCGCTCATG
CTTTCCCTCCCTGTCGAAAAAGTCCTCAATTGGACCACAGAAGCCACCAA
TCTAGTCCAGAAGAACGGCATTAAAGCATGGGTCACCGTCCACGATGGCT
TCCTCAACCTAGACAAATGGGACAAGATGCTCAAAACCCGACCGAGTAAT
ATGATGCTTGATACCCACCAATATACCGTCTTCAACACGGGCGAAATCGT
CCTCAATCACACCAGAAGAGTAGAGCTCATCTGTGAAAGCTGGTACTCTA
TGATCCAGCAGATCAACATTACCAGCACGGGATGGGGTCCGACCATTTGC
GGCGAATGGTCGCAAGCAGACACCGACTGCGCTCAATACGTGAACAACGT
CGGTCGCGGTACTCGTTGGGAAGGCACTTTTTCTCTTACCGACTCGACTC
AGTACTGTCCCACAGCGAGCGAGGGGACCTGCAGCTGCACGCAAGCGAAT
GCTGTCCCTGGCGTCTACTCGGAGGGATACAAGACCTTTCTCCAGACCTA
CGCCGAAGCACAGATGTCGGCGTTTGAGTCCGCTATGGGGTGGTTCTACT
GGACTTGGGCAACGGAGTCTGCAGCGCAGTGGAGCTATAGGACGGCGTGG
AAGAACGGCTACATGCCGAAGAAGGCCTATAGCCCGTCATTTAAGTGCGG
GGATACCATCCCTAGTTTTGGCAATCTGCCGGAGTATTATTGAATGCCGG
GCCACTCCCGCAGTCGGGACCGGTTGAGTCCCAGCAGCGAGCTGGACGAT
GCCGATCCCGTTTACTCTCCTTCGGTGTACCAGAGAGAGCATTATTATAA
CAATGATTCGTTGTTTGACTCCGCTGACGATGATTACACCCGTACACCAC
GAAATGTCTATAGTTACGAAACCCATGATGAATATCACGATGATGACGAT
GACGATGACGATGTCCATGAGCATGACCACGACCATGAATACGATGATAA
GTTTGAGGAGCCTTGGGTTCCGTTGCGCGCTCAGGTCGAGGGTGATCAGT
GGAGAGAGGGGTTCGAGACTGCCATACCTAAGGAAGAGGATGTCACTCAA
GCAAAGGAGTATCAGTACCAGATGAGCGGGGCGCTTGGTGATGATGGACC
TCCTCCGCTGCCGTCTGATGCGTTGGGTAGGGGAAAGGGAAAGAAGCGAT
TGGATCGGGAGACGCGACGGCAGAGGAGGAAAGAGAGGCTTGCGGCATTC
TTCAAGCATAAGAATGGTAGTGCGTCGGCAGGATTGGTCAGCGGGGATGC
TCTGGCAAAGCTGCTTGGGTCACAGGATGGAGATGAGGATTGTTTGAGTC
ATTTGGGTACTGAGCGTGCGGACTCGATGTCGCAGAAGAATTTAGAAGGG
GGAAGGCAAAGGAAGCTCCCAGTGCTGAGTGAGGAGCCGATGATGCTTCG
GCCGTTTCCAGCGGTAGCGCCGACCGGACAGACACAGGGACGGGTGGTCT
CTGGGGCGCAGTTGGAAGAGGGAGGCCCCGGTATGGAGATGCGACATCGT
GGTGGAGGTGGGCCGCCTGCAGAGGGGTTGCTTCAGAAAGAGGGTGATTG
GGACGGAAGCACGAAAGGTTCTTCTACTTCTGCACGGCCGTCGTTCTGGA
AGCGATATCATAAAACGTTCATCTTCTTTGCGATCTTGATAGTGCTGGCA
GCTATTGCGATTCCTGTGGGGATCATCGAGGCAAGAAGGCTTCATGGGAC
GAGTGGAGGCGATAATTCTTCGAATTCTAATCTGAAAGGGATTAGTCGCG
ATAGCATTCCGGCTTACGCTAGAGGGACGTACCTGGATCCCTTTACATGG
TACGACACCACGGATTTTAATGTGACGTTCACAAATGCTACAGTGGGTGG
ACTGTCTATCATGGGACTGAACTCGACATGGAACGACTCAGCCCAAGCAA
ATGAGAACGTGCCACCCTTAAATGAGAAGTTTCCGTACGGGTCGCAACCT
ATTCGCGGTGTCAACCTTGGAGGTTGGTTGTCGATCGAGCCCTTCATCGT
CCCTTCGCTTTTCGATACCTACACTTCAAGCGAAGGGATCATCGACGAGT
GGACACTATCTGAGAAACTAGGCGATTCAGCCGCCTCAGTCATCGAAAAG
CACTATGCCACCTTCATCACCGAGCAAGACTTTGCTGACATCAGAGATGC
CGGTCTCGATCACGTCCGGATCCAGTTCTCATACTGGGCCATCAAGACAT
ACGATGGCGATCCGTATGTCCCAAAAATCGCATGGCGGTACCTCCTCAGA
GCCATCGAATACTGCCGCAAATACGGTCTCCGAGTCAACCTCGATCCCCA
CGGTATTCCAGGGAGCCAGAACGGCTGGAACCACAGTGGCCGACAGGGCA
CAATCGGCTGGCTAAATGGAACCGACGGGGAACTTAACCGACAACGATCT
CTCGAAATGCATGACCAGCTCTCGCAATTCTTCGCACAGGACCGATACAA
GAATGTTGTAACGATTTACGGCCTCGTAAACGAACCGCTCATGCTTTCCC
TCCCTGTCGAAAAAGTCCTCAATTGGACCACAGAAGCCACCAATCTAGTC
CAGAAGAACGGCATTAAAGCATGGGTCACCGTCCACGATGGCTTCCTCAA
CCTAGACAAATGGGACAAGATGCTCAAAACCCGACCGAGTAATATGATGC
TTGATACCCACCAATATACCGTCTTCAACACGGGCGAAATCGTCCTCAAT
CACACCAGAAGAGTAGAGCTCATCTGTGAAAGCTGGTACTCTATGATCCA
GCAGATCAACATTACCAGCACGGGATGGGGTCCGACCATTTGCGGCGAAT
GGTCGCAAGCAGACACCGACTGCGCTCAATACGTGAACAACGTCGGTCGC
GGTACTCGTTGGGAAGGCACTTTTTCTCTTACCGACTCGACTCAGTACTG
TCCCACAGCGAGCGAGGGGACCTGCAGCTGCACGCAAGCGAATGCTGTCC
CTGGCGTCTACTCGGAGGGATACAAGACCTTTCTCCAGACCTACGCCGAA
GCACAGATGTCGGCGTTTGAGTCCGCTATGGGGTGGTTCTACTGGACTTG
GGCAACGGAGTCTGCAGCGCAGTGGAGCTATAGGACGGCGTGGAAGAACG
GCTACATGCCGAAGAAGGCCTATAGCCCGTCATTTAAGTGCGGGGATACC
ATCCCTAGTTTTGGCAATCTGCCGGAGTATTATTGAATGCCGGGCCACTC
CCGCAGTCGGGACCGGTTGAGTCCCAGCAGCGAGCTGGACGATGCCGATC
CCGTTTACTCTCCTTCGGTGTACCAGAGAGAGCATTATTATAACAATGAT
TCGTTGTTTGACTCCGCTGACGATGATTACACCCGTACACCACGAAATGT
CTATAGTTACGAAACCCATGATGAATATCACGATGATGACGATGACGATG
ACGATGTCCATGAGCATGACCACGACCATGAATACGATGATAAGTTTGAG
GAGCCTTGGGTTCCGTTGCGCGCTCAGGTCGAGGGTGATCAGTGGAGAGA
GGGGTTCGAGACTGCCATACCTAAGGAAGAGGATGTCACTCAAGCAAAGG
AGTATCAGTACCAGATGAGCGGGGCGCTTGGTGATGATGGACCTCCTCCG
CTGCCGTCTGATGCGTTGGGTAGGGGAAAGGGAAAGAAGCGATTGGATCG
GGAGACGCGACGGCAGAGGAGGAAAGAGAGGCTTGCGGCATTCTTCAAGC
ATAAGAATGGTAGTGCGTCGGCAGGATTGGTCAGCGGGGATGCTCTGGCA
AAGCTGCTTGGGTCACAGGATGGAGATGAGGATTGTTTGAGTCATTTGGG
TACTGAGCGTGCGGACTCGATGTCGCAGAAGAATTTAGAAGGGGGAAGGC
AAAGGAAGCTCCCAGTGCTGAGTGAGGAGCCGATGATGCTTCGGCCGTTT
CCAGCGGTAGCGCCGACCGGACAGACACAGGGACGGGTGGTCTCTGGGGC
GCAGTTGGAAGAGGGAGGCCCCGGTATGGAGATGCGACATCGTGGTGGAG
GTGGGCCGCCTGCAGAGGGGTTGCTTCAGAAAGAGGGTGATTGGGACGGA
AGCACGAAAGGTTCTTCTACTTCTGCACGGCCGTCGTTCTGGAAGCGATA
TCATAAAACGTTCATCTTCTTTGCGATCTTGATAGTGCTGGCAGCTATTG
CGATTCCTGTGGGGATCATCGAGGCAAGAAGGCTTCATGGGACGAGTGGA
GGCGATAATTCTTCGAATTCTAATCTGAAAGGGATTAGTCGCGATAGCAT
TCCGGCTTACGCTAGAGGGACGTACCTGGATCCCTTTACATGGTACGACA
CCACGGATTTTAATGTGACGTTCACAAATGCTACAGTGGGTGGACTGTCT
ATCATGGGACTGAACTCGACATGGAACGACTCAGCCCAAGCAAATGAGAA
CGTGCCACCCTTAAATGAGAAGTTTCCGTACGGGTCGCAACCTATTCGCG
GTGTCAACCTTGGAGGTTGGTTGTCGATCGAGCCCTTCATCGTCCCTTCG
CTTTTCGATACCTACACTTCAAGCGAAGGGATCATCGACGAGTGGACACT
ATCTGAGAAACTAGGCGATTCAGCCGCCTCAGTCATCGAAAAGCACTATG
CCACCTTCATCACCGAGCAAGACTTTGCTGACATCAGAGATGCCGGTCTC
GATCACGTCCGGATCCAGTTCTCATACTGGGCCATCAAGACATACGATGG
CGATCCGTATGTCCCAAAAATCGCATGGCGGTACCTCCTCAGAGCCATCG
AATACTGCCGCAAATACGGTCTCCGAGTCAACCTCGATCCCCACGGTATT
CCAGGGAGCCAGAACGGCTGGAACCACAGTGGCCGACAGGGCACAATCGG
CTGGCTAAATGGAACCGACGGGGAACTTAACCGACAACGATCTCTCGAAA
TGCATGACCAGCTCTCGCAATTCTTCGCACAGGACCGATACAAGAATGTT
GTAACGATTTACGGCCTCGTAAACGAACCGCTCATGCTTTCCCTCCCTGT
CGAAAAAGTCCTCAATTGGACCACAGAAGCCACCAATCTAGTCCAGAAGA
ACGGCATTAAAGCATGGGTCACCGTCCACGATGGCTTCCTCAACCTAGAC
AAATGGGACAAGATGCTCAAAACCCGACCGAGTAATATGATGCTTGATAC
CCACCAATATACCGTCTTCAACACGGGCGAAATCGTCCTCAATCACACCA
GAAGAGTAGAGCTCATCTGTGAAAGCTGGTACTCTATGATCCAGCAGATC
AACATTACCAGCACGGGATGGGGTCCGACCATTTGCGGCGAATGGTCGCA
AGCAGACACCGACTGCGCTCAATACGTGAACAACGTCGGTCGCGGTACTC
GTTGGGAAGGCACTTTTTCTCTTACCGACTCGACTCAGTACTGTCCCACA
GCGAGCGAGGGGACCTGCAGCTGCACGCAAGCGAATGCTGTCCCTGGCGT
CTACTCGGAGGGATACAAGACCTTTCTCCAGACCTACGCCGAAGCACAGA
TGTCGGCGTTTGAGTCCGCTATGGGGTGGTTCTACTGGACTTGGGCAACG
GAGTCTGCAGCGCAGTGGAGCTATAGGACGGCGTGGAAGAACGGCTACAT
GCCGAAGAAGGCCTATAGCCCGTCATTTAAGTGCGGGGATACCATCCCTA
GTTTTGGCAATCTGCCGGAGTATTATTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0005975 | carbohydrate metabolic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | CAZy:GH5_49 |
| Note | CAZy:GH5_15 |
| Note | CAZy:GH5_45 |
| Note | CAZy:GH5_50 |
| Note | CAZy:GH5_14 |
| Note | CAZy:GH5 |
| Note | CAZy:GH5_9 |
| DBxref | InterPro:IPR017853 |
| DBxref | InterPro:IPR001547 |
| DBxref | PFAM:PF00150 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An11 | supercontig | An11:1827591..1830177 + |
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