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Sequences
The following sequences are available for this feature:
mRNA from alignment at An11:1835334..1837161- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_007112-T1 ID=CBS51388_007112-T1|Name=CBS51388_007112-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1828bp|location=Sequence derived from alignment at An11:1835334..1837161- (Aspergillus niger CBS 513.88)
ATGGCTCCGAAATCTCTGGCGGAACAGATGGCCGAGTTGGAGGATTTGAC
TCCTCGTGGTAATTATTCCAATCTCAGGTGATACTTGTGTTCGGTGGACC
TGGTTCTGATTGTGTTGTTTTCTAGACTACGACCCTGAGGATCTTGATCG
CGGAAACCAGGATAGTGATGAAGAGGGTGCCGGTGCTAAGGATGAGAATG
CGGGGAGGGAGCATTATCAGGCTGTTGGGTAAGTTTTCCTTCATTTCTCG
ATTTGTTTATTGGGTGGTGTGTGGTGTTTATGGAGGGCGTTGTCTAAATC
ATTGTGTCATTATAGGAAAGCGAAGCTTCGCAAGCAGGACCCGATCTCTC
TCGGAAAGCAATATGCTGGGTCGAAAGTAAGTCGCGCGGCGTTGGAGGCT
GATAGTGATGATGATCCGTTTGCGGCGCGATCGGGCGATGAGGATGAGGA
TGATGACGAGGAGGACGAGGAGGAAGATGAAGATGAAGATCTGGAGCTGG
GTAGCGACGAGGATGATGAGGACATCTCGGAGAGTGAAGAGGAGGAGGAG
GAGCGCCCATCCAAGTCCGCAAAGAAGGGAAAGAAGCAGGTCGAGCTGGA
CGACATGGACACCGACGAGTCGGACGACCTTGAAGGCAGCGAGGGATCTT
TCGACGAGGACGAGATGCCGTCTGACGAAGATGAGGAGGATGAAGACGAC
GAGTCGGATGACGAGGACGACGACGAAGAATCAGAATCCGACTCCGACTC
CAAACCGCGCAAACCCACCGACGACCGCGACGAACTCCGCCGCCTCATGG
CGACCGACCAAAAGACCATCGCCGCGAGCATCTCCCAAGCGGCCAAAGCC
GACGCCGCGAAAGGTAAAGCCGTGAAGCAACAGCGCGCCACCTTCGACGC
CCTCCTCAACACCCGAATCAAGCTCCAAAAGGGCCTCACAGCCATCAACC
AGCTCTCCCTCGCCGCCACCTCCCCCGACGCCGACTCCGAAGAAGCCATC
ACCTCCGCCGAATCCGCCGCTCTCGCCCTCTGGTCCACATTGGAAGACTT
GCGCGTTGCGCTCGCCGACGCCCACAACACCAACGCAGAGGAACCAAAGA
AGCGAAAGCGCGTAGACACCGACACGCCCACCGCGACTCTCTGGAAGCGC
ATGACCGATCTTGAATCCGCCGCGATTACCCACCGCCGCACCATCCTCGA
CAAATGGTCCGCGAAGGTCCGCGGCTCGACCGCCACGACGGCCGCAAACT
CACGCGGCAAGCTCCTCAACCCGTCCGGCTCGGGCGCGCAATCCATCACC
GCCGTCCTGGACGCCCAGGTCGCGACTGAAACGGGCGACCATTCCCGCGC
TGCTAAGCGCGTCCGTCAAGACACTACCACTACCACTACTGAGGGCGGAG
CTACGACTCCCATCTACGACGACACCGTCTTCTACCAATCCCTACTGCGC
GATCTCGTCGAGCAGCGCATGGCTTCCTCCGACGCGATCACGAACGGCCT
CGATACCCTGCACATACAACTGCCGACGCGCGGCGGGGCGGCGATTCACC
CTGTTACGGGGATGCGGAAGGATAAGGTCAAGCGGGATGTGGATACGCGG
GCGTCGAAGGGCCGGAAGATGCGGTTCGATGTGCATGAGAAGTTGCAGAA
TTTTATGGCGCCGGAGGATCGCGGAAGCTGGACGAAGCATGCGCGCGAGG
AGTTCTTTGCGTCGTTGTTGGGCAAGACGGCGAGTGGGTTATTGAGGGAG
GAGAGTGGTGATGAGGAGAGTGGCGCGGAGAGTGAGGAGGATCGGGAGGA
GGGTGGATTGAGGCTTTTTAGGAGCTAG back to topCoding sequence (CDS) from alignment at An11:1835334..1837161- >CBS51388_007112-T1 ID=CBS51388_007112-T1|Name=CBS51388_007112-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=5022bp|location=Sequence derived from alignment at An11:1835334..1837161- (Aspergillus niger CBS 513.88)
GAAAGCGAAGCTTCGCAAGCAGGACCCGATCTCTCTCGGAAAGCAATATG
CTGGGTCGAAAGTAAGTCGCGCGGCGTTGGAGGCTGATAGTGATGATGAT
CCGTTTGCGGCGCGATCGGGCGATGAGGATGAGGATGATGACGAGGAGGA
CGAGGAGGAAGATGAAGATGAAGATCTGGAGCTGGGTAGCGACGAGGATG
ATGAGGACATCTCGGAGAGTGAAGAGGAGGAGGAGGAGCGCCCATCCAAG
TCCGCAAAGAAGGGAAAGAAGCAGGTCGAGCTGGACGACATGGACACCGA
CGAGTCGGACGACCTTGAAGGCAGCGAGGGATCTTTCGACGAGGACGAGA
TGCCGTCTGACGAAGATGAGGAGGATGAAGACGACGAGTCGGATGACGAG
GACGACGACGAAGAATCAGAATCCGACTCCGACTCCAAACCGCGCAAACC
CACCGACGACCGCGACGAACTCCGCCGCCTCATGGCGACCGACCAAAAGA
CCATCGCCGCGAGCATCTCCCAAGCGGCCAAAGCCGACGCCGCGAAAGGT
AAAGCCGTGAAGCAACAGCGCGCCACCTTCGACGCCCTCCTCAACACCCG
AATCAAGCTCCAAAAGGGCCTCACAGCCATCAACCAGCTCTCCCTCGCCG
CCACCTCCCCCGACGCCGACTCCGAAGAAGCCATCACCTCCGCCGAATCC
GCCGCTCTCGCCCTCTGGTCCACATTGGAAGACTTGCGCGTTGCGCTCGC
CGACGCCCACAACACCAACGCAGAGGAACCAAAGAAGCGAAAGCGCGTAG
ACACCGACACGCCCACCGCGACTCTCTGGAAGCGCATGACCGATCTTGAA
TCCGCCGCGATTACCCACCGCCGCACCATCCTCGACAAATGGTCCGCGAA
GGTCCGCGGCTCGACCGCCACGACGGCCGCAAACTCACGCGGCAAGCTCC
TCAACCCGTCCGGCTCGGGCGCGCAATCCATCACCGCCGTCCTGGACGCC
CAGGTCGCGACTGAAACGGGCGACCATTCCCGCGCTGCTAAGCGCGTCCG
TCAAGACACTACCACTACCACTACTGAGGGCGGAGCTACGACTCCCATCT
ACGACGACACCGTCTTCTACCAATCCCTACTGCGCGATCTCGTCGAGCAG
CGCATGGCTTCCTCCGACGCGATCACGAACGGCCTCGATACCCTGCACAT
ACAACTGCCGACGCGCGGCGGGGCGGCGATTCACCCTGTTACGGGGATGC
GGAAGGATAAGGTCAAGCGGGATGTGGATACGCGGGCGTCGAAGGGCCGG
AAGATGCGGTTCGATGTGCATGAGAAGTTGCAGAATTTTATGGCGCCGGA
GGATCGCGGAAGCTGGACGAAGCATGCGCGCGAGGAGTTCTTTGCGTCGT
TGTTGGGCAAGACGGCGAGTGGGTTATTGAGGGAGGAGAGTGGTGATGAG
GAGAGTGGCGCGGAGAGTGAGGAGGATCGGGAGGAGGGTGGATTGAGGCT
TTTTAGGAGCTAGACTACGACCCTGAGGATCTTGATCGCGGAAACCAGGA
TAGTGATGAAGAGGGTGCCGGTGCTAAGGATGAGAATGCGGGGAGGGAGC
ATTATCAGGCTGTTGGATGGCTCCGAAATCTCTGGCGGAACAGATGGCCG
AGTTGGAGGATTTGACTCCTCGTGGAAAGCGAAGCTTCGCAAGCAGGACC
CGATCTCTCTCGGAAAGCAATATGCTGGGTCGAAAGTAAGTCGCGCGGCG
TTGGAGGCTGATAGTGATGATGATCCGTTTGCGGCGCGATCGGGCGATGA
GGATGAGGATGATGACGAGGAGGACGAGGAGGAAGATGAAGATGAAGATC
TGGAGCTGGGTAGCGACGAGGATGATGAGGACATCTCGGAGAGTGAAGAG
GAGGAGGAGGAGCGCCCATCCAAGTCCGCAAAGAAGGGAAAGAAGCAGGT
CGAGCTGGACGACATGGACACCGACGAGTCGGACGACCTTGAAGGCAGCG
AGGGATCTTTCGACGAGGACGAGATGCCGTCTGACGAAGATGAGGAGGAT
GAAGACGACGAGTCGGATGACGAGGACGACGACGAAGAATCAGAATCCGA
CTCCGACTCCAAACCGCGCAAACCCACCGACGACCGCGACGAACTCCGCC
GCCTCATGGCGACCGACCAAAAGACCATCGCCGCGAGCATCTCCCAAGCG
GCCAAAGCCGACGCCGCGAAAGGTAAAGCCGTGAAGCAACAGCGCGCCAC
CTTCGACGCCCTCCTCAACACCCGAATCAAGCTCCAAAAGGGCCTCACAG
CCATCAACCAGCTCTCCCTCGCCGCCACCTCCCCCGACGCCGACTCCGAA
GAAGCCATCACCTCCGCCGAATCCGCCGCTCTCGCCCTCTGGTCCACATT
GGAAGACTTGCGCGTTGCGCTCGCCGACGCCCACAACACCAACGCAGAGG
AACCAAAGAAGCGAAAGCGCGTAGACACCGACACGCCCACCGCGACTCTC
TGGAAGCGCATGACCGATCTTGAATCCGCCGCGATTACCCACCGCCGCAC
CATCCTCGACAAATGGTCCGCGAAGGTCCGCGGCTCGACCGCCACGACGG
CCGCAAACTCACGCGGCAAGCTCCTCAACCCGTCCGGCTCGGGCGCGCAA
TCCATCACCGCCGTCCTGGACGCCCAGGTCGCGACTGAAACGGGCGACCA
TTCCCGCGCTGCTAAGCGCGTCCGTCAAGACACTACCACTACCACTACTG
AGGGCGGAGCTACGACTCCCATCTACGACGACACCGTCTTCTACCAATCC
CTACTGCGCGATCTCGTCGAGCAGCGCATGGCTTCCTCCGACGCGATCAC
GAACGGCCTCGATACCCTGCACATACAACTGCCGACGCGCGGCGGGGCGG
CGATTCACCCTGTTACGGGGATGCGGAAGGATAAGGTCAAGCGGGATGTG
GATACGCGGGCGTCGAAGGGCCGGAAGATGCGGTTCGATGTGCATGAGAA
GTTGCAGAATTTTATGGCGCCGGAGGATCGCGGAAGCTGGACGAAGCATG
CGCGCGAGGAGTTCTTTGCGTCGTTGTTGGGCAAGACGGCGAGTGGGTTA
TTGAGGGAGGAGAGTGGTGATGAGGAGAGTGGCGCGGAGAGTGAGGAGGA
TCGGGAGGAGGGTGGATTGAGGCTTTTTAGGAGCTAGACTACGACCCTGA
GGATCTTGATCGCGGAAACCAGGATAGTGATGAAGAGGGTGCCGGTGCTA
AGGATGAGAATGCGGGGAGGGAGCATTATCAGGCTGTTGGATGGCTCCGA
AATCTCTGGCGGAACAGATGGCCGAGTTGGAGGATTTGACTCCTCGTGGA
AAGCGAAGCTTCGCAAGCAGGACCCGATCTCTCTCGGAAAGCAATATGCT
GGGTCGAAAGTAAGTCGCGCGGCGTTGGAGGCTGATAGTGATGATGATCC
GTTTGCGGCGCGATCGGGCGATGAGGATGAGGATGATGACGAGGAGGACG
AGGAGGAAGATGAAGATGAAGATCTGGAGCTGGGTAGCGACGAGGATGAT
GAGGACATCTCGGAGAGTGAAGAGGAGGAGGAGGAGCGCCCATCCAAGTC
CGCAAAGAAGGGAAAGAAGCAGGTCGAGCTGGACGACATGGACACCGACG
AGTCGGACGACCTTGAAGGCAGCGAGGGATCTTTCGACGAGGACGAGATG
CCGTCTGACGAAGATGAGGAGGATGAAGACGACGAGTCGGATGACGAGGA
CGACGACGAAGAATCAGAATCCGACTCCGACTCCAAACCGCGCAAACCCA
CCGACGACCGCGACGAACTCCGCCGCCTCATGGCGACCGACCAAAAGACC
ATCGCCGCGAGCATCTCCCAAGCGGCCAAAGCCGACGCCGCGAAAGGTAA
AGCCGTGAAGCAACAGCGCGCCACCTTCGACGCCCTCCTCAACACCCGAA
TCAAGCTCCAAAAGGGCCTCACAGCCATCAACCAGCTCTCCCTCGCCGCC
ACCTCCCCCGACGCCGACTCCGAAGAAGCCATCACCTCCGCCGAATCCGC
CGCTCTCGCCCTCTGGTCCACATTGGAAGACTTGCGCGTTGCGCTCGCCG
ACGCCCACAACACCAACGCAGAGGAACCAAAGAAGCGAAAGCGCGTAGAC
ACCGACACGCCCACCGCGACTCTCTGGAAGCGCATGACCGATCTTGAATC
CGCCGCGATTACCCACCGCCGCACCATCCTCGACAAATGGTCCGCGAAGG
TCCGCGGCTCGACCGCCACGACGGCCGCAAACTCACGCGGCAAGCTCCTC
AACCCGTCCGGCTCGGGCGCGCAATCCATCACCGCCGTCCTGGACGCCCA
GGTCGCGACTGAAACGGGCGACCATTCCCGCGCTGCTAAGCGCGTCCGTC
AAGACACTACCACTACCACTACTGAGGGCGGAGCTACGACTCCCATCTAC
GACGACACCGTCTTCTACCAATCCCTACTGCGCGATCTCGTCGAGCAGCG
CATGGCTTCCTCCGACGCGATCACGAACGGCCTCGATACCCTGCACATAC
AACTGCCGACGCGCGGCGGGGCGGCGATTCACCCTGTTACGGGGATGCGG
AAGGATAAGGTCAAGCGGGATGTGGATACGCGGGCGTCGAAGGGCCGGAA
GATGCGGTTCGATGTGCATGAGAAGTTGCAGAATTTTATGGCGCCGGAGG
ATCGCGGAAGCTGGACGAAGCATGCGCGCGAGGAGTTCTTTGCGTCGTTG
TTGGGCAAGACGGCGAGTGGGTTATTGAGGGAGGAGAGTGGTGATGAGGA
GAGTGGCGCGGAGAGTGAGGAGGATCGGGAGGAGGGTGGATTGAGGCTTT
TTAGGAGCTAGACTACGACCCTGAGGATCTTGATCGCGGAAACCAGGATA
GTGATGAAGAGGGTGCCGGTGCTAAGGATGAGAATGCGGGGAGGGAGCAT
TATCAGGCTGTTGGATGGCTCCGAAATCTCTGGCGGAACAGATGGCCGAG
TTGGAGGATTTGACTCCTCGTG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09262WSH |
| DBxref | InterPro:IPR012617 |
| DBxref | InterPro:IPR025160 |
| DBxref | PFAM:PF08164 |
| DBxref | PFAM:PF13339 |
| Product | rRNA-processing protein bfr2 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An11 | supercontig | An11:1835334..1837161 - |
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