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Sequences
The following sequences are available for this feature:
mRNA from alignment at An11:1850932..1852306+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_007117-T1 ID=CBS51388_007117-T1|Name=CBS51388_007117-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1375bp|location=Sequence derived from alignment at An11:1850932..1852306+ (Aspergillus niger CBS 513.88)
ATGCACTTCTTTGACTTACCTCAAGAGCTTCTGGAAGCTATCTTGGCACA
AGCCTCGCGTGGCTCTCTCGCCAGCCTCGCGCGGGTTTGCCAACGCCTCC
GACCGCTCGCCGAGCGCATCCTGTACCAGTCGGTGTACTTGCGAAATCAC
GACGGAGAAAAGTTCACCTACGCACTGGACTGTGTGCCAGCTCGCGCCGA
GTATGTTAGAGAGCTGATAGTTCACTACCATTATGTCGATGTTGAAGATG
AAGAGGAGTATTATCCCTTGTATGCAGAAACCCTCTCCCCGACGATCGGG
CGTCTCGTAAATCTGCGAACACTTGTCATCAAGGGGCTCGAGTTCGACGC
GGACCGAGAAGAGGACGATGAAATCATTGGGGGGTATGAGAGAGTCATCG
CAGAAGCCGAGAAATGGGACACACTTTTTGCGCAATCTGCTGTGCCGGGC
TCGCAGATCCTTCCCTCTCTTACAAAATGTCTGCCAATAATCTTCATTGT
TCTCTTACCTCATATGCTAATATTTCTCAGGTATGATGATCATGGACGAC
ATCGCGCCCAATCAACCAGCGTGGGACTTTAGTCTGAGGGGCGCCGTGCT
AATCCATCCGTGCCTCCAAGACCTGACCATCGTCGGGGGCGAAATTGAGA
GCCTGAAGAATCATGTGCCTTCACCACGATCAACGCCCCTCGAGAGGCTA
AGCCTGTTCGGCTGCGATGTGTCCCCCTCTGCGATGGGCGAGATGTTGTC
GCTGCCACGTGCCTTGAAACATTTGACGTATAAAGGGGCTCCATGGTGTT
ACAGGCCCACAAATCTTATGCCGAACCGGCAAATATACGTCGACAAGATA
AAGGCACAAGCGGATTCGCTTCTGAGTCTTGACATTGACTTCTATCCAGG
GGTTGTTGACAATCCCCCGGTAGACTTCACCGCCCTCCAGTGCCTGGAAC
AACTTACCGTCGAATCAGATGCATTGAGAGGAACTGGAGAATACGACCCG
AAGAACAACAGCAAACTATGCCTCTGGAAAAGCCCCGAGCTAAAATGTCA
GCTTCCTCCAAGCCTCAAGCATCTAGTGCTGTTCCTATACTGCCCGAAGA
ACCCGCCAGATTGGCGTACTCTAATTATACTCTACAACTGGATTTCGCGG
GGAAGTTTGCCGAACCTGGAAAAGGTCACGTTCCAGATAGCAAAACCGTG
TGGGCAAGAGATACTGGACCGTTCGATCGGAGGAAATGAAATGTCGATTG
GTCAGGCTTTTGGAGAGGTCAAAGTGCAATTGCAGTTCGAGCTGGTCCCT
AACAGCAACAACGACGGCTACGAGCTTTTCGACTGCCCTGAATGCGGCGT
AAATTGGCGAAACATGCATGCTTGA back to topCoding sequence (CDS) from alignment at An11:1850932..1852306+ >CBS51388_007117-T1 ID=CBS51388_007117-T1|Name=CBS51388_007117-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2646bp|location=Sequence derived from alignment at An11:1850932..1852306+ (Aspergillus niger CBS 513.88)
ATGCACTTCTTTGACTTACCTCAAGAGCTTCTGGAAGCTATCTTGGCACA
AGCCTCGCGTGGCTCTCTCGCCAGCCTCGCGCGGGTTTGCCAACGCCTCC
GACCGCTCGCCGAGCGCATCCTGTACCAGTCGGTGTACTTGCGAAATCAC
GACGGAGAAAAGTTCACCTACGCACTGGACTGTGTGCCAGCTCGCGCCGA
GTATGTTAGAGAGCTGATAGTTCACTACCATTATGTCGATGTTGAAGATG
AAGAGGAGTATTATCCCTTGTATGCAGAAACCCTCTCCCCGACGATCGGG
CGTCTCGTAAATCTGCGAACACTTGTCATCAAGGGGCTCGAGTTCGACGC
GGACCGAGAAGAGGACGATGAAATCATTGGGGGGTATGAGAGAGTCATCG
CAGAAGCCGAGAAATGGGACACACTTTTTGCGCAATCTGCTGTGCCGGGC
TCGCAGATCCTTCCCTCTCTTACAAAATGTATGATGATCATGGACGACAT
CGCGCCCAATCAACCAGCGTGGGACTTTAGTCTGAGGGGCGCCGTGCTAA
TCCATCCGTGCCTCCAAGACCTGACCATCGTCGGGGGCGAAATTGAGAGC
CTGAAGAATCATGTGCCTTCACCACGATCAACGCCCCTCGAGAGGCTAAG
CCTGTTCGGCTGCGATGTGTCCCCCTCTGCGATGGGCGAGATGTTGTCGC
TGCCACGTGCCTTGAAACATTTGACGTATAAAGGGGCTCCATGGTGTTAC
AGGCCCACAAATCTTATGCCGAACCGGCAAATATACGTCGACAAGATAAA
GGCACAAGCGGATTCGCTTCTGAGTCTTGACATTGACTTCTATCCAGGGG
TTGTTGACAATCCCCCGGTAGACTTCACCGCCCTCCAGTGCCTGGAACAA
CTTACCGTCGAATCAGATGCATTGAGAGGAACTGGAGAATACGACCCGAA
GAACAACAGCAAACTATGCCTCTGGAAAAGCCCCGAGCTAAAATGTCAGC
TTCCTCCAAGCCTCAAGCATCTAGTGCTGTTCCTATACTGCCCGAAGAAC
CCGCCAGATTGGCGTACTCTAATTATACTCTACAACTGGATTTCGCGGGG
AAGTTTGCCGAACCTGGAAAAGGTCACGTTCCAGATAGCAAAACCGTGTG
GGCAAGAGATACTGGACCGTTCGATCGGAGGAAATGAAATGTCGATTGGT
CAGGCTTTTGGAGAGGTCAAAGTGCAATTGCAGTTCGAGCTGGTCCCTAA
CAGCAACAACGACGGCTACGAGCTTTTCGACTGCCCTGAATGCGGCGTAA
ATTGGCGAAACATGCATGCTTGAATGCACTTCTTTGACTTACCTCAAGAG
CTTCTGGAAGCTATCTTGGCACAAGCCTCGCGTGGCTCTCTCGCCAGCCT
CGCGCGGGTTTGCCAACGCCTCCGACCGCTCGCCGAGCGCATCCTGTACC
AGTCGGTGTACTTGCGAAATCACGACGGAGAAAAGTTCACCTACGCACTG
GACTGTGTGCCAGCTCGCGCCGAGTATGTTAGAGAGCTGATAGTTCACTA
CCATTATGTCGATGTTGAAGATGAAGAGGAGTATTATCCCTTGTATGCAG
AAACCCTCTCCCCGACGATCGGGCGTCTCGTAAATCTGCGAACACTTGTC
ATCAAGGGGCTCGAGTTCGACGCGGACCGAGAAGAGGACGATGAAATCAT
TGGGGGGTATGAGAGAGTCATCGCAGAAGCCGAGAAATGGGACACACTTT
TTGCGCAATCTGCTGTGCCGGGCTCGCAGATCCTTCCCTCTCTTACAAAA
TGTATGATGATCATGGACGACATCGCGCCCAATCAACCAGCGTGGGACTT
TAGTCTGAGGGGCGCCGTGCTAATCCATCCGTGCCTCCAAGACCTGACCA
TCGTCGGGGGCGAAATTGAGAGCCTGAAGAATCATGTGCCTTCACCACGA
TCAACGCCCCTCGAGAGGCTAAGCCTGTTCGGCTGCGATGTGTCCCCCTC
TGCGATGGGCGAGATGTTGTCGCTGCCACGTGCCTTGAAACATTTGACGT
ATAAAGGGGCTCCATGGTGTTACAGGCCCACAAATCTTATGCCGAACCGG
CAAATATACGTCGACAAGATAAAGGCACAAGCGGATTCGCTTCTGAGTCT
TGACATTGACTTCTATCCAGGGGTTGTTGACAATCCCCCGGTAGACTTCA
CCGCCCTCCAGTGCCTGGAACAACTTACCGTCGAATCAGATGCATTGAGA
GGAACTGGAGAATACGACCCGAAGAACAACAGCAAACTATGCCTCTGGAA
AAGCCCCGAGCTAAAATGTCAGCTTCCTCCAAGCCTCAAGCATCTAGTGC
TGTTCCTATACTGCCCGAAGAACCCGCCAGATTGGCGTACTCTAATTATA
CTCTACAACTGGATTTCGCGGGGAAGTTTGCCGAACCTGGAAAAGGTCAC
GTTCCAGATAGCAAAACCGTGTGGGCAAGAGATACTGGACCGTTCGATCG
GAGGAAATGAAATGTCGATTGGTCAGGCTTTTGGAGAGGTCAAAGTGCAA
TTGCAGTTCGAGCTGGTCCCTAACAGCAACAACGACGGCTACGAGCTTTT
CGACTGCCCTGAATGCGGCGTAAATTGGCGAAACATGCATGCTTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036047 |
| DBxref | InterPro:IPR001810 |
| DBxref | PFAM:PF12937 |
| DBxref | PFAM:PF00646 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An11 | supercontig | An11:1850932..1852306 + |
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