You are here

CBS51388_007144-T1, CBS51388_007144-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_007144-T1
Unique NameCBS51388_007144-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An11:1930059..1931006-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_007144-T1 ID=CBS51388_007144-T1|Name=CBS51388_007144-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=948bp|location=Sequence derived from alignment at An11:1930059..1931006- (Aspergillus niger CBS 513.88)
ATGTGGCCCTTTTTTGTCCCCTCATTCCTAACCCCGGACTATACCTGGCC GGCACCCGCCGTGTCAACTGTCCGGAGAACCACCCCACCGGTTCCCGCCG TACCAGGCCCCATCAGCAGATGGCTGTGCGGTAAGGCGCATGGTTTTCTC TACCATGTCTCCCGATGCTACTGCTACCTATTCGGAATATATTTCAATCC GCACATTATTCAACTGCCCTTCGGGCTTATATTGAAATGGACAGATCGCA CGAGTGTTGAGGAGGTCATTGCAATGCAAATGGTTCGAGCGGCTGGCATT CCAGTCCCAAGAGTCCTCAGCTGCGGCGAGCACGTTACCCCACACTTAAC GCGCGAGGTCTCAATACTCATGACGAGATTACCGGGCTTCACCTTAGTGA ACCTTGATGACCCTTTAGAGGTTGACGATGAGGGCCCGTGGCTCGAAGAA CTCAAAACCTGCGTCCACGCTATGCGCGAGTGGGAGCCACCAAGTCAAGA AACCATCTGCTCGCCTATTGGAACGGCCCTCCGAAGCTCGCGTGTCCCTG ATCATATCATGGGCCCTTTCATAGATCACAGATCATTCTACCAGCACCTT TTCGCGCCAGCATCACAGCACGGTTTCAGATCGATTAATGAGTATAATGA GGCCCTAGCTACTGCGAGGCAATTACAACAACGCCCTTATAAAGTGAAAT TCACTCATGGAGACTTCAAAGCTCATAACATTCTAATCAACAATGATGGA CACTTGTCTGGCTTTCTCGACTGGGAATCTGGGGGTTGGTATCCCGAGTA TTGGGAATTTACAACCGCAATGAGGTTTGGGAGAGACAGCTGGTGGTATC AGGTTGCTATGTGGATGGGTGGTCACGAATATAAAGAGGAGTTGGAATCG GATAGAGCTTTAAATCTTCTAACCGTGGACTCCTACATAGCATTTTAA
back to top

Coding sequence (CDS) from alignment at An11:1930059..1931006-

>CBS51388_007144-T1 ID=CBS51388_007144-T1|Name=CBS51388_007144-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=948bp|location=Sequence derived from alignment at An11:1930059..1931006- (Aspergillus niger CBS 513.88)
ATGTGGCCCTTTTTTGTCCCCTCATTCCTAACCCCGGACTATACCTGGCC
GGCACCCGCCGTGTCAACTGTCCGGAGAACCACCCCACCGGTTCCCGCCG
TACCAGGCCCCATCAGCAGATGGCTGTGCGGTAAGGCGCATGGTTTTCTC
TACCATGTCTCCCGATGCTACTGCTACCTATTCGGAATATATTTCAATCC
GCACATTATTCAACTGCCCTTCGGGCTTATATTGAAATGGACAGATCGCA
CGAGTGTTGAGGAGGTCATTGCAATGCAAATGGTTCGAGCGGCTGGCATT
CCAGTCCCAAGAGTCCTCAGCTGCGGCGAGCACGTTACCCCACACTTAAC
GCGCGAGGTCTCAATACTCATGACGAGATTACCGGGCTTCACCTTAGTGA
ACCTTGATGACCCTTTAGAGGTTGACGATGAGGGCCCGTGGCTCGAAGAA
CTCAAAACCTGCGTCCACGCTATGCGCGAGTGGGAGCCACCAAGTCAAGA
AACCATCTGCTCGCCTATTGGAACGGCCCTCCGAAGCTCGCGTGTCCCTG
ATCATATCATGGGCCCTTTCATAGATCACAGATCATTCTACCAGCACCTT
TTCGCGCCAGCATCACAGCACGGTTTCAGATCGATTAATGAGTATAATGA
GGCCCTAGCTACTGCGAGGCAATTACAACAACGCCCTTATAAAGTGAAAT
TCACTCATGGAGACTTCAAAGCTCATAACATTCTAATCAACAATGATGGA
CACTTGTCTGGCTTTCTCGACTGGGAATCTGGGGGTTGGTATCCCGAGTA
TTGGGAATTTACAACCGCAATGAGGTTTGGGAGAGACAGCTGGTGGTATC
AGGTTGCTATGTGGATGGGTGGTCACGAATATAAAGAGGAGTTGGAATCG
GATAGAGCTTTAAATCTTCTAACCGTGGACTCCTACATAGCATTTTAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_007144CBS51388_007144Aspergillus niger CBS 513.88gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007144-T1.cdsCBS51388_007144-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007144-T1.exon1CBS51388_007144-T1.exon1Aspergillus niger CBS 513.88exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007144-T1CBS51388_007144-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR011009
DBxrefInterPro:IPR002575
DBxrefPFAM:PF01636
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An11supercontigAn11:1930059..1931006 -