You are here

Home

CBS51388_007149-T1, CBS51388_007149-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_007149-T1
Unique NameCBS51388_007149-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An11:1940036..1941393+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_007149-T1 ID=CBS51388_007149-T1|Name=CBS51388_007149-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1358bp|location=Sequence derived from alignment at An11:1940036..1941393+ (Aspergillus niger CBS 513.88)
ATGTCACCCAAACGTCTTATCGTCTGCTGCGATGGTAAGTCTGCTCAGTA
GCACTGCTGAACATGTCTATATCAGTGCTAAAAGTCGGTCGGTTGTTTCA
GGTACCTGGAAAGACTCCACCGCAGATACTCGTCAACCTCCGTCCAATGT
TACGCGGTTGACGCGCACTTTGAGTCGCGTGGCAGTTGTGAAGGAGAATG
GACAAGACAAAGAAATTCCTCAGATAATCTATTACCAAAAGGGCGTCGGG
ACCGGCCTAGCGGACAAGTATTTCGGAGGTACGGTGTCTTAGACGTGAAC
CCGACCGTGTCCCATGGACATTTCTGACACATGCAGTAGGAGTCGCTGGG
ATTGGAATCAGTGCGAACGTCCGTGCCGCCTATGGCTTTCTCGTGGATAA
CTACGATGAGGGCGATAAGATCTACTTCTTTGGATTCTCTAGGGGTGCTT
ATACCGCCAGAGCGATCGCGGGTATAGTCTGTGAACTAGGGCTGTTGACA
CCCCGAGGCATGGACAATTTCGCCACGGTATATGATGATTTCTACAACCG
AAAATTGCCAGTGTACAATGAGGATGATCGCCGACAGCTAGGCTTCCGTG
ATCCTCTCCCGCGGTTTACGGTGGAGATTGTTGGGGTCTGGGATACGGTC
GGTTTCTATAAGCCCTGGTTGTTCGGACACTGGTCCGGGGAGAAACTTGA
GTTTCGAAATACTCTGCTTTCCAGGAAGGTCAAGTATGCGTTCCATGCCT
TAGCACTGGACGAAGAGAGAACCGCATATCAGCCCACGCTCTGGCATCTG
CCAGAGAATGCTAAAGGTCAGGAGCTGCTCCAAGTGTGGTTCTCTGGGGT
GCATACAGATGTGGGTGGGGGAGGACATGACCCTCGACTGGCCAATATTA
CCTTAGCCTGGATGATCGCGCAATGCACAAAGCATAACCAGTTGAGTTTC
GATATAGAGGACTACCTCTTCGACCGTCCTCCGCGACCGTTAGAGACAGA
CACAGTGCCATGGGCGACGGCATTGGGAAAAACCAGTACGGGAAGTTTCG
CTCGGACAGTGGAGACCATCTTGGGCGGGAAGTCGAAAAGAACCCCCCTC
CAGTATAGGCAGGTTGGCGATGGAGATCCGCAGCCTACCAATGAGATGAT
CCATGTTTCCATTGTTGACCGTGTTTTAAGTGGGAATGGAAACATGGCTG
AAGCCGTACCCTGGCCCTCACTAGTGATCAGAAACCCAACTCCTGATCAA
GAATGGGTACTTGACGGTGGAGGGAGACTTATGCAGATGCCAGCGCTGAG
ACAGGAGCTGTTTATGAAGGGAAGAATTCGCACGGTTCATGTGGATGAGA
TAGACTAA
back to top

Coding sequence (CDS) from alignment at An11:1940036..1941393+

>CBS51388_007149-T1 ID=CBS51388_007149-T1|Name=CBS51388_007149-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3690bp|location=Sequence derived from alignment at An11:1940036..1941393+ (Aspergillus niger CBS 513.88)
ATGTCACCCAAACGTCTTATCGTCTGCTGCGATGGTACCTGGAAAGACTC
CACCGCAGATACTCGTCAACCTCCGTCCAATGTTACGCGGTTGACGCGCA
CTTTGAGTCGCGTGGCAGTTGTGAAGGAGAATGGACAAGACAAAGAAATT
CCTCAGATAATCTATTACCAAAAGGGCGTCGGGACCGGCCTAGCGGACAA
GTATTTCGGAGGAGTCGCTGGGATTGGAATCAGTGCGAACGTCCGTGCCG
CCTATGGCTTTCTCGTGGATAACTACGATGAGGGCGATAAGATCTACTTC
TTTGGATTCTCTAGGGGTGCTTATACCGCCAGAGCGATCGCGGGTATAGT
CTGTGAACTAGGGCTGTTGACACCCCGAGGCATGGACAATTTCGCCACGG
TATATGATGATTTCTACAACCGAAAATTGCCAGTGTACAATGAGGATGAT
CGCCGACAGCTAGGCTTCCGTGATCCTCTCCCGCGGTTTACGGTGGAGAT
TGTTGGGGTCTGGGATACGGTCGGTTTCTATAAGCCCTGGTTGTTCGGAC
ACTGGTCCGGGGAGAAACTTGAGTTTCGAAATACTCTGCTTTCCAGGAAG
GTCAAGTATGCGTTCCATGCCTTAGCACTGGACGAAGAGAGAACCGCATA
TCAGCCCACGCTCTGGCATCTGCCAGAGAATGCTAAAGGTCAGGAGCTGC
TCCAAGTGTGGTTCTCTGGGGTGCATACAGATGTGGGTGGGGGAGGACAT
GACCCTCGACTGGCCAATATTACCTTAGCCTGGATGATCGCGCAATGCAC
AAAGCATAACCAGTTGAGTTTCGATATAGAGGACTACCTCTTCGACCGTC
CTCCGCGACCGTTAGAGACAGACACAGTGCCATGGGCGACGGCATTGGGA
AAAACCAGTACGGGAAGTTTCGCTCGGACAGTGGAGACCATCTTGGGCGG
GAAGTCGAAAAGAACCCCCCTCCAGTATAGGCAGGTTGGCGATGGAGATC
CGCAGCCTACCAATGAGATGATCCATGTTTCCATTGTTGACCGTGTTTTA
AGTGGGAATGGAAACATGGCTGAAGCCGTACCCTGGCCCTCACTAGTGAT
CAGAAACCCAACTCCTGATCAAGAATGGGTACTTGACGGTGGAGGGAGAC
TTATGCAGATGCCAGCGCTGAGACAGGAGCTGTTTATGAAGGGAAGAATT
CGCACGGTTCATGTGGATGAGATAGACTAAATGTCACCCAAACGTCTTAT
CGTCTGCTGCGATGGTACCTGGAAAGACTCCACCGCAGATACTCGTCAAC
CTCCGTCCAATGTTACGCGGTTGACGCGCACTTTGAGTCGCGTGGCAGTT
GTGAAGGAGAATGGACAAGACAAAGAAATTCCTCAGATAATCTATTACCA
AAAGGGCGTCGGGACCGGCCTAGCGGACAAGTATTTCGGAGGAGTCGCTG
GGATTGGAATCAGTGCGAACGTCCGTGCCGCCTATGGCTTTCTCGTGGAT
AACTACGATGAGGGCGATAAGATCTACTTCTTTGGATTCTCTAGGGGTGC
TTATACCGCCAGAGCGATCGCGGGTATAGTCTGTGAACTAGGGCTGTTGA
CACCCCGAGGCATGGACAATTTCGCCACGGTATATGATGATTTCTACAAC
CGAAAATTGCCAGTGTACAATGAGGATGATCGCCGACAGCTAGGCTTCCG
TGATCCTCTCCCGCGGTTTACGGTGGAGATTGTTGGGGTCTGGGATACGG
TCGGTTTCTATAAGCCCTGGTTGTTCGGACACTGGTCCGGGGAGAAACTT
GAGTTTCGAAATACTCTGCTTTCCAGGAAGGTCAAGTATGCGTTCCATGC
CTTAGCACTGGACGAAGAGAGAACCGCATATCAGCCCACGCTCTGGCATC
TGCCAGAGAATGCTAAAGGTCAGGAGCTGCTCCAAGTGTGGTTCTCTGGG
GTGCATACAGATGTGGGTGGGGGAGGACATGACCCTCGACTGGCCAATAT
TACCTTAGCCTGGATGATCGCGCAATGCACAAAGCATAACCAGTTGAGTT
TCGATATAGAGGACTACCTCTTCGACCGTCCTCCGCGACCGTTAGAGACA
GACACAGTGCCATGGGCGACGGCATTGGGAAAAACCAGTACGGGAAGTTT
CGCTCGGACAGTGGAGACCATCTTGGGCGGGAAGTCGAAAAGAACCCCCC
TCCAGTATAGGCAGGTTGGCGATGGAGATCCGCAGCCTACCAATGAGATG
ATCCATGTTTCCATTGTTGACCGTGTTTTAAGTGGGAATGGAAACATGGC
TGAAGCCGTACCCTGGCCCTCACTAGTGATCAGAAACCCAACTCCTGATC
AAGAATGGGTACTTGACGGTGGAGGGAGACTTATGCAGATGCCAGCGCTG
AGACAGGAGCTGTTTATGAAGGGAAGAATTCGCACGGTTCATGTGGATGA
GATAGACTAAATGTCACCCAAACGTCTTATCGTCTGCTGCGATGGTACCT
GGAAAGACTCCACCGCAGATACTCGTCAACCTCCGTCCAATGTTACGCGG
TTGACGCGCACTTTGAGTCGCGTGGCAGTTGTGAAGGAGAATGGACAAGA
CAAAGAAATTCCTCAGATAATCTATTACCAAAAGGGCGTCGGGACCGGCC
TAGCGGACAAGTATTTCGGAGGAGTCGCTGGGATTGGAATCAGTGCGAAC
GTCCGTGCCGCCTATGGCTTTCTCGTGGATAACTACGATGAGGGCGATAA
GATCTACTTCTTTGGATTCTCTAGGGGTGCTTATACCGCCAGAGCGATCG
CGGGTATAGTCTGTGAACTAGGGCTGTTGACACCCCGAGGCATGGACAAT
TTCGCCACGGTATATGATGATTTCTACAACCGAAAATTGCCAGTGTACAA
TGAGGATGATCGCCGACAGCTAGGCTTCCGTGATCCTCTCCCGCGGTTTA
CGGTGGAGATTGTTGGGGTCTGGGATACGGTCGGTTTCTATAAGCCCTGG
TTGTTCGGACACTGGTCCGGGGAGAAACTTGAGTTTCGAAATACTCTGCT
TTCCAGGAAGGTCAAGTATGCGTTCCATGCCTTAGCACTGGACGAAGAGA
GAACCGCATATCAGCCCACGCTCTGGCATCTGCCAGAGAATGCTAAAGGT
CAGGAGCTGCTCCAAGTGTGGTTCTCTGGGGTGCATACAGATGTGGGTGG
GGGAGGACATGACCCTCGACTGGCCAATATTACCTTAGCCTGGATGATCG
CGCAATGCACAAAGCATAACCAGTTGAGTTTCGATATAGAGGACTACCTC
TTCGACCGTCCTCCGCGACCGTTAGAGACAGACACAGTGCCATGGGCGAC
GGCATTGGGAAAAACCAGTACGGGAAGTTTCGCTCGGACAGTGGAGACCA
TCTTGGGCGGGAAGTCGAAAAGAACCCCCCTCCAGTATAGGCAGGTTGGC
GATGGAGATCCGCAGCCTACCAATGAGATGATCCATGTTTCCATTGTTGA
CCGTGTTTTAAGTGGGAATGGAAACATGGCTGAAGCCGTACCCTGGCCCT
CACTAGTGATCAGAAACCCAACTCCTGATCAAGAATGGGTACTTGACGGT
GGAGGGAGACTTATGCAGATGCCAGCGCTGAGACAGGAGCTGTTTATGAA
GGGAAGAATTCGCACGGTTCATGTGGATGAGATAGACTAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_007149CBS51388_007149Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007149-T1.exon1CBS51388_007149-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_007149-T1.exon2CBS51388_007149-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_007149-T1.exon3CBS51388_007149-T1.exon3Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007149-T1.cdsCBS51388_007149-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007149-T1CBS51388_007149-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR029058
DBxrefInterPro:IPR018712
DBxrefPFAM:PF09994
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An11supercontigAn11:1940036..1941393 +
Powered by Drupal