You are here

Home

CBS51388_007162-T1, CBS51388_007162-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_007162-T1
Unique NameCBS51388_007162-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An11:1983795..1985399+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_007162-T1 ID=CBS51388_007162-T1|Name=CBS51388_007162-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1605bp|location=Sequence derived from alignment at An11:1983795..1985399+ (Aspergillus niger CBS 513.88)
ATGTCGTCATCTTCGCAGCCTGACTACCCTAGCTTGATCAATACTTTGCT
CGAGCACCTCAACAATGCTTCCCTGGACCCCATTCGCGCAGAGAGTATGC
GAAGCACACTGGAGGAATTAAAATCAGTGGCTACTATCCTGGAGCCCGGG
GAATCATCTGAAGAAGAAAGTGTGGAAAGCTCAGTGGAACGGATTCGGAA
ACTCAAAGGTGCAGAGCAAAAGGTGCTGGATCTGATAGCCCGGATACGTT
TCGGGATACAAAACCCAACATATCCAGTCCACAATGAAGCCCGAAATATC
CAGTCACATCCGATTCTAGAAGACATAAAAGAGCTGAAGGTTTTCGTATC
GGATGTACAAGGTATGACAGGGGGAGAAGAGAATGTCAGAGCGGGAAACC
TCTTTGAACGCCTTGCAAACTTGCAGGTACGGTTGCATAATGCCCAGAGC
GAATCAGAGGTCAGGCAGCTCGAGGTAGAAGAGCTACGTCAAGCCACTGA
AGATGTTAGGCGATTTGCTCGCCGCAGGAACATCATGTTAGCCCAGCCCA
TTTGGTCTTACCGAGGAGATTGTACCTGCCCAAATGTTCTCTTCTTTTCC
GGATCTAATCCAACGCGAGAGGCGCTCTGTACCTTGGCGAAGCTCCGTGG
GTTCGAATTGCGAGACAAGAATCCTATTGGAGTCGATTTTGCTGAGGGTC
GCTGGCATGACCTGCAAGAAGCTAACCTTGCTGTATTTGATCTATCGGAC
GAGGAGCCCCAGGTATACTACGAGATGGGGGTCGCAATCACATTAGGAAA
AGAACTCGTGCTCTTATGTCGCAGAGGCGTCATCCCCAAGTTTGATGTCG
GCCAGAATTATGCAGAGTATGGAATCCACGATAATCGATTTGGCGTGGTT
CAGGCTGCTTTAGAATCGTGCCTTTATCGACTGCAAAACCGTGGCGATCG
GTCGACACCAACACCACAAGAGACCTACAGATATGCCAAATGGCTTGCAC
GTCAGCAACCGGACAATGCCACCCTCGCTACCTTTTGTCTTCTGGACAAG
GCTAAAGATGATCCTGTCGAGATACACAATTCAGTCTTAGTTGTGAATCA
ATTTCTAATACGACAGCATGAAATAATCTTTCCGAGGTGGCCAGGCTGCT
ACCCTGACCCGGACGCCAAAAGATGTTTTATTGTCATGTCTTTTGCTGAG
CACATGAATCCTGCGCGGGTTGCGATTGAGGAAGGGATCCGCTTAGCAGG
TGGAGATTCCATCCGAGGAGATGTTGCCGAGGATCCCCATATACTACGAT
CAATCTGGGATGAGATATGTCGTGCAAACCTTATCGTTGTCGACCTCACG
GAATTTAATCTCAACGTCTGTCTCGAGCTGGGCATTGCTCATACCCTCGG
CCGAAAGATCCTTCTTGTCGGTCACGAAGGGACGCAAAATAACCTCAACC
AAAATCTATCAAACGTAGCAAAAGTGAGACTACAACCCTACACAAGTCAT
CTCGACTTGCAGGCGACATGCTTCTGTGCCGTCAAAAGCCTAGATGTCAA
AAGCGCGGTGCTTCAGGAAACTCGACCGCTTTCTTCGTTCCACGCGATTA
GGTAG
back to top

Coding sequence (CDS) from alignment at An11:1983795..1985399+

>CBS51388_007162-T1 ID=CBS51388_007162-T1|Name=CBS51388_007162-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1605bp|location=Sequence derived from alignment at An11:1983795..1985399+ (Aspergillus niger CBS 513.88)
ATGTCGTCATCTTCGCAGCCTGACTACCCTAGCTTGATCAATACTTTGCT
CGAGCACCTCAACAATGCTTCCCTGGACCCCATTCGCGCAGAGAGTATGC
GAAGCACACTGGAGGAATTAAAATCAGTGGCTACTATCCTGGAGCCCGGG
GAATCATCTGAAGAAGAAAGTGTGGAAAGCTCAGTGGAACGGATTCGGAA
ACTCAAAGGTGCAGAGCAAAAGGTGCTGGATCTGATAGCCCGGATACGTT
TCGGGATACAAAACCCAACATATCCAGTCCACAATGAAGCCCGAAATATC
CAGTCACATCCGATTCTAGAAGACATAAAAGAGCTGAAGGTTTTCGTATC
GGATGTACAAGGTATGACAGGGGGAGAAGAGAATGTCAGAGCGGGAAACC
TCTTTGAACGCCTTGCAAACTTGCAGGTACGGTTGCATAATGCCCAGAGC
GAATCAGAGGTCAGGCAGCTCGAGGTAGAAGAGCTACGTCAAGCCACTGA
AGATGTTAGGCGATTTGCTCGCCGCAGGAACATCATGTTAGCCCAGCCCA
TTTGGTCTTACCGAGGAGATTGTACCTGCCCAAATGTTCTCTTCTTTTCC
GGATCTAATCCAACGCGAGAGGCGCTCTGTACCTTGGCGAAGCTCCGTGG
GTTCGAATTGCGAGACAAGAATCCTATTGGAGTCGATTTTGCTGAGGGTC
GCTGGCATGACCTGCAAGAAGCTAACCTTGCTGTATTTGATCTATCGGAC
GAGGAGCCCCAGGTATACTACGAGATGGGGGTCGCAATCACATTAGGAAA
AGAACTCGTGCTCTTATGTCGCAGAGGCGTCATCCCCAAGTTTGATGTCG
GCCAGAATTATGCAGAGTATGGAATCCACGATAATCGATTTGGCGTGGTT
CAGGCTGCTTTAGAATCGTGCCTTTATCGACTGCAAAACCGTGGCGATCG
GTCGACACCAACACCACAAGAGACCTACAGATATGCCAAATGGCTTGCAC
GTCAGCAACCGGACAATGCCACCCTCGCTACCTTTTGTCTTCTGGACAAG
GCTAAAGATGATCCTGTCGAGATACACAATTCAGTCTTAGTTGTGAATCA
ATTTCTAATACGACAGCATGAAATAATCTTTCCGAGGTGGCCAGGCTGCT
ACCCTGACCCGGACGCCAAAAGATGTTTTATTGTCATGTCTTTTGCTGAG
CACATGAATCCTGCGCGGGTTGCGATTGAGGAAGGGATCCGCTTAGCAGG
TGGAGATTCCATCCGAGGAGATGTTGCCGAGGATCCCCATATACTACGAT
CAATCTGGGATGAGATATGTCGTGCAAACCTTATCGTTGTCGACCTCACG
GAATTTAATCTCAACGTCTGTCTCGAGCTGGGCATTGCTCATACCCTCGG
CCGAAAGATCCTTCTTGTCGGTCACGAAGGGACGCAAAATAACCTCAACC
AAAATCTATCAAACGTAGCAAAAGTGAGACTACAACCCTACACAAGTCAT
CTCGACTTGCAGGCGACATGCTTCTGTGCCGTCAAAAGCCTAGATGTCAA
AAGCGCGGTGCTTCAGGAAACTCGACCGCTTTCTTCGTTCCACGCGATTA
GGTAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_007162CBS51388_007162Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007162-T1.exon1CBS51388_007162-T1.exon1Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007162-T1.cdsCBS51388_007162-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007162-T1CBS51388_007162-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An11supercontigAn11:1983795..1985399 +
Powered by Drupal