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CBS51388_007167-T1, CBS51388_007167-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_007167-T1
Unique NameCBS51388_007167-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An11:2003515..2005389-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_007167-T1 ID=CBS51388_007167-T1|Name=CBS51388_007167-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1875bp|location=Sequence derived from alignment at An11:2003515..2005389- (Aspergillus niger CBS 513.88)
ATGCATTCATCATGGACACCGCCTCCTATCGGCTCCAGGCCTCTTGCACT
CCTCGGTGCGGGTGTTTTGGGCCGTCGAATCGCCTGTGTCTTTGCCGCAG
CAGGATACAACGTCAATTTATACGACCCGTCTCTCAGCGCACAACAGGCC
GCGCTGGACTACGTCACGCAAAATCTGAAAACGTATTCGAAGTTTTCCAA
AGGGAACCGCCGCTTCGGCCACTGTCGCGCGTTCTCCGACCTTGAAAGCA
CTGTGAGCGACGCCTGGTTGGTCATTGAAGCAGTTCCCGAACATCTACAA
ATGAAGATTGATGTCATGGGCGAGCTCGACAAGTTAGCGCCGGTGGATTG
TATCTTGGCCTCCAACTCCTCGTCGTTCAAGTCGCGATTCATGCTCGAGA
AAGTTGGTGGGCACAGACGGCCGTTGGTCTGCAATATGCATTTTTATATG
CCACCAGAAAAGCGGGTTGTCGAGTTGATGACTGACGGAGAAACCTGGCC
TGAGGTCTTTCCATTTCTGACAAGAGTCCTGGAGGATGTTGGCATGGTTC
CGGTAACTGCTCGCCGAGAGTCCACTGGGTGAGTCGCTATTGACCCAGAT
TAAACCCTCTCCCCCTCTTCTCCGCAGGATGCGAGGCTAATAGGAGCCAA
CAGTTTCGTTTTCAATCGCCTCTGGGCAGCCATTAAGCGCGAAGTTATAA
CCATCTTGGCCGAAGAAGTCTCCGAACCGAAAGAGATCGACAAGATCTGG
GTTGAGATGTTTCACAATGCGGCTGGGCCTTGTACCTTTATGGATCAGGT
TGGCCTGGATACTGTTGCATTCATTGAAGACCATTATATCGAGGAGCGCC
AATTAGGTTCTACGTTGGCCGTTGACTGGCTACGCAAAAACTATGTCAAT
CAAGGGAAACTGGGCAATAAAAGTGACAAGGGCGGCCTCTATCCTCCTCG
ACCTGCATTTAATTCTTCGAATCTGCCCACAGTCTACTTCCTCGATATTG
GACTGGGTTCAATTGTACAGGATCTTTCGGCACTTGGAAAGTCGGGTCGC
ATCCTCCGACGAACCAGTGATGGAGAGTGCGAAACACTCATCACCAACTT
GAACTGTCCTGACGGGATTGACTATTCGCCCTCTGTTGGCCGCATTTTCT
GGACAAACATGGGAATGAGACCGGCCGCAAACGATGGCTCCGTCATGTCT
GCCAACTTGGACGGCAGCGACGTACAGGTCGTGCTACCAGAAGGCGCCGT
GCATACACCCAAGCAACTTGTTGTGGACGACACGAACCAAAAGCTTTACT
TCTGCGATAGGGAGGGAATGCGCATCCACCGGTGCGACTTCGATGGTCAA
AACCATGAAATTTTGGTGTGCAGGGGTGATTTTGGTACCGAAGACCAGAA
TGACCAAACCCGTTGGTGTGTTGGAATTACCATTGATGAAACGCGCGGCA
AAATTTATTGGTCTCAGAAGGGTCCCTCTAAGTCGAATCAGGGACGCATT
TTCCGTGCAAATATCAAGATGCCTGCTGGTGAGACGGCTACCAACCGAAC
AGATATTGAATCTCTTCTTGAGGGGTTGCCTGAACCGATCGACCTCGAAA
TCGACACAGAGACTGAGACGCTCTATTGGACTGACCGCGGGGAGCACCCG
TATGGCAACACATTGAACCAGGCATCCGTTGGCGCGGGGAAACCTCATCT
AAAGATATTGGCCCGTCATTTTAACGAGCTTATCGGGATGAAGGTTGACT
GGGCAAACCGGCAAATTTACCTCAGTGACTTGGGAGGATCTCTATATAGG
GTTGATATGGATGGGTCCAACAAGACTGTCCTCCATAGCGACGAGGGTAG
CTACTCTGGTATCACTTTGGTTTGA
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Coding sequence (CDS) from alignment at An11:2003515..2005389-

>CBS51388_007167-T1 ID=CBS51388_007167-T1|Name=CBS51388_007167-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3600bp|location=Sequence derived from alignment at An11:2003515..2005389- (Aspergillus niger CBS 513.88)
TTTCGTTTTCAATCGCCTCTGGGCAGCCATTAAGCGCGAAGTTATAACCA
TCTTGGCCGAAGAAGTCTCCGAACCGAAAGAGATCGACAAGATCTGGGTT
GAGATGTTTCACAATGCGGCTGGGCCTTGTACCTTTATGGATCAGGTTGG
CCTGGATACTGTTGCATTCATTGAAGACCATTATATCGAGGAGCGCCAAT
TAGGTTCTACGTTGGCCGTTGACTGGCTACGCAAAAACTATGTCAATCAA
GGGAAACTGGGCAATAAAAGTGACAAGGGCGGCCTCTATCCTCCTCGACC
TGCATTTAATTCTTCGAATCTGCCCACAGTCTACTTCCTCGATATTGGAC
TGGGTTCAATTGTACAGGATCTTTCGGCACTTGGAAAGTCGGGTCGCATC
CTCCGACGAACCAGTGATGGAGAGTGCGAAACACTCATCACCAACTTGAA
CTGTCCTGACGGGATTGACTATTCGCCCTCTGTTGGCCGCATTTTCTGGA
CAAACATGGGAATGAGACCGGCCGCAAACGATGGCTCCGTCATGTCTGCC
AACTTGGACGGCAGCGACGTACAGGTCGTGCTACCAGAAGGCGCCGTGCA
TACACCCAAGCAACTTGTTGTGGACGACACGAACCAAAAGCTTTACTTCT
GCGATAGGGAGGGAATGCGCATCCACCGGTGCGACTTCGATGGTCAAAAC
CATGAAATTTTGGTGTGCAGGGGTGATTTTGGTACCGAAGACCAGAATGA
CCAAACCCGTTGGTGTGTTGGAATTACCATTGATGAAACGCGCGGCAAAA
TTTATTGGTCTCAGAAGGGTCCCTCTAAGTCGAATCAGGGACGCATTTTC
CGTGCAAATATCAAGATGCCTGCTGGTGAGACGGCTACCAACCGAACAGA
TATTGAATCTCTTCTTGAGGGGTTGCCTGAACCGATCGACCTCGAAATCG
ACACAGAGACTGAGACGCTCTATTGGACTGACCGCGGGGAGCACCCGTAT
GGCAACACATTGAACCAGGCATCCGTTGGCGCGGGGAAACCTCATCTAAA
GATATTGGCCCGTCATTTTAACGAGCTTATCGGGATGAAGGTTGACTGGG
CAAACCGGCAAATTTACCTCAGTGACTTGGGAGGATCTCTATATAGGGTT
GATATGGATGGGTCCAACAAGACTGTCCTCCATAGCGACGAGGGTAGCTA
CTCTGGTATCACTTTGGTTTGAATGCATTCATCATGGACACCGCCTCCTA
TCGGCTCCAGGCCTCTTGCACTCCTCGGTGCGGGTGTTTTGGGCCGTCGA
ATCGCCTGTGTCTTTGCCGCAGCAGGATACAACGTCAATTTATACGACCC
GTCTCTCAGCGCACAACAGGCCGCGCTGGACTACGTCACGCAAAATCTGA
AAACGTATTCGAAGTTTTCCAAAGGGAACCGCCGCTTCGGCCACTGTCGC
GCGTTCTCCGACCTTGAAAGCACTGTGAGCGACGCCTGGTTGGTCATTGA
AGCAGTTCCCGAACATCTACAAATGAAGATTGATGTCATGGGCGAGCTCG
ACAAGTTAGCGCCGGTGGATTGTATCTTGGCCTCCAACTCCTCGTCGTTC
AAGTCGCGATTCATGCTCGAGAAAGTTGGTGGGCACAGACGGCCGTTGGT
CTGCAATATGCATTTTTATATGCCACCAGAAAAGCGGGTTGTCGAGTTGA
TGACTGACGGAGAAACCTGGCCTGAGGTCTTTCCATTTCTGACAAGAGTC
CTGGAGGATGTTGGCATGGTTCCGGTAACTGCTCGCCGAGAGTCCACTGG
TTTCGTTTTCAATCGCCTCTGGGCAGCCATTAAGCGCGAAGTTATAACCA
TCTTGGCCGAAGAAGTCTCCGAACCGAAAGAGATCGACAAGATCTGGGTT
GAGATGTTTCACAATGCGGCTGGGCCTTGTACCTTTATGGATCAGGTTGG
CCTGGATACTGTTGCATTCATTGAAGACCATTATATCGAGGAGCGCCAAT
TAGGTTCTACGTTGGCCGTTGACTGGCTACGCAAAAACTATGTCAATCAA
GGGAAACTGGGCAATAAAAGTGACAAGGGCGGCCTCTATCCTCCTCGACC
TGCATTTAATTCTTCGAATCTGCCCACAGTCTACTTCCTCGATATTGGAC
TGGGTTCAATTGTACAGGATCTTTCGGCACTTGGAAAGTCGGGTCGCATC
CTCCGACGAACCAGTGATGGAGAGTGCGAAACACTCATCACCAACTTGAA
CTGTCCTGACGGGATTGACTATTCGCCCTCTGTTGGCCGCATTTTCTGGA
CAAACATGGGAATGAGACCGGCCGCAAACGATGGCTCCGTCATGTCTGCC
AACTTGGACGGCAGCGACGTACAGGTCGTGCTACCAGAAGGCGCCGTGCA
TACACCCAAGCAACTTGTTGTGGACGACACGAACCAAAAGCTTTACTTCT
GCGATAGGGAGGGAATGCGCATCCACCGGTGCGACTTCGATGGTCAAAAC
CATGAAATTTTGGTGTGCAGGGGTGATTTTGGTACCGAAGACCAGAATGA
CCAAACCCGTTGGTGTGTTGGAATTACCATTGATGAAACGCGCGGCAAAA
TTTATTGGTCTCAGAAGGGTCCCTCTAAGTCGAATCAGGGACGCATTTTC
CGTGCAAATATCAAGATGCCTGCTGGTGAGACGGCTACCAACCGAACAGA
TATTGAATCTCTTCTTGAGGGGTTGCCTGAACCGATCGACCTCGAAATCG
ACACAGAGACTGAGACGCTCTATTGGACTGACCGCGGGGAGCACCCGTAT
GGCAACACATTGAACCAGGCATCCGTTGGCGCGGGGAAACCTCATCTAAA
GATATTGGCCCGTCATTTTAACGAGCTTATCGGGATGAAGGTTGACTGGG
CAAACCGGCAAATTTACCTCAGTGACTTGGGAGGATCTCTATATAGGGTT
GATATGGATGGGTCCAACAAGACTGTCCTCCATAGCGACGAGGGTAGCTA
CTCTGGTATCACTTTGGTTTGAATGCATTCATCATGGACACCGCCTCCTA
TCGGCTCCAGGCCTCTTGCACTCCTCGGTGCGGGTGTTTTGGGCCGTCGA
ATCGCCTGTGTCTTTGCCGCAGCAGGATACAACGTCAATTTATACGACCC
GTCTCTCAGCGCACAACAGGCCGCGCTGGACTACGTCACGCAAAATCTGA
AAACGTATTCGAAGTTTTCCAAAGGGAACCGCCGCTTCGGCCACTGTCGC
GCGTTCTCCGACCTTGAAAGCACTGTGAGCGACGCCTGGTTGGTCATTGA
AGCAGTTCCCGAACATCTACAAATGAAGATTGATGTCATGGGCGAGCTCG
ACAAGTTAGCGCCGGTGGATTGTATCTTGGCCTCCAACTCCTCGTCGTTC
AAGTCGCGATTCATGCTCGAGAAAGTTGGTGGGCACAGACGGCCGTTGGT
CTGCAATATGCATTTTTATATGCCACCAGAAAAGCGGGTTGTCGAGTTGA
TGACTGACGGAGAAACCTGGCCTGAGGTCTTTCCATTTCTGACAAGAGTC
CTGGAGGATGTTGGCATGGTTCCGGTAACTGCTCGCCGAGAGTCCACTGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006631fatty acid metabolic process
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:00038573-hydroxyacyl-CoA dehydrogenase activity
GO:0016491oxidoreductase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_007167CBS51388_007167Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007167-T1CBS51388_007167-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007167-T1.cdsCBS51388_007167-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007167-T1.exon2CBS51388_007167-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_007167-T1.exon1CBS51388_007167-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR008927
DBxrefInterPro:IPR006108
DBxrefInterPro:IPR006176
DBxrefInterPro:IPR013328
DBxrefInterPro:IPR011042
DBxrefInterPro:IPR000033
DBxrefPFAM:PF02737
DBxrefPFAM:PF00725
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An11supercontigAn11:2003515..2005389 -
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