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CBS51388_007172-T1, CBS51388_007172-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_007172-T1
Unique NameCBS51388_007172-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An11:2022094..2025053+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_007172-T1 ID=CBS51388_007172-T1|Name=CBS51388_007172-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2960bp|location=Sequence derived from alignment at An11:2022094..2025053+ (Aspergillus niger CBS 513.88)
ATGCGATCCAGTATCGCCTGCGCTCGTTGCCGTCGAAGCAAGATAAAATG
CGTCAACGCCGGCATCGATACCACCTGCCGCGCCTGTGAATCCTCCGGTC
GAGAATGTGTATATCCCGCCCCGGCCATCGGGGTGGGCGGAGGTGCCGCC
AAGCGAGACCTGGCCGCGCTGGCGGAGGGCGAGGAACGAAACAATGATTG
GGATAGCCCCAAGCGACAACGCTCACGGAAGGCCGTCGGCATCTCCTCGT
CCGCCGCAAAGGATGGGGGTAGATCCGCGCTCGACGTGCTCGATTCCTCA
GTCCTGACCACCAAGGTCTGGGACGCCGTCTTCGATCTCTTCCAGTCGCA
CTTTGCGACCATGCTTCCGTTCCTGCATCCCGCCTCGTTCATCGGTCAAA
CGCGCCAACTCTCCACCCCCTCGACCAATCCGTCCACAAATTCAGAACCC
TCGCGCGATCCCGCGCAAAGTCCGCCTGCAAGCAAGCCGGATCCCAATCC
GCTCATTCCCCTCGGTGTCCTCGCACTCACCGCCCGTTTCCATCCCCAGC
TGGTCGCTTTCCACTCTCCACCGTCCCCTGGAAACCCGTCCAATCCGCTT
GTCGCTTCGGAATTCTATGCGACGGCGTTGCGTAGCCGGCTGGCCGGCGT
CGACGGCGCTAGTCTCGCAGTCACGGACCTCACCCGGGTCCAAGCATTGC
TCATGCTGGCGCTGCATGAATGGGGCATGTGCCGTGGCAAGAGCGCATGG
TTGTATGTCGGAATGGCCATCCGGCTATCCCAAGCCATGGGCCTTCCCTT
CGAGCTGGAAAATGAGATGGCGTCCCGCGAGGGGCCCCGGTCCCCCGTAC
TGAAGATGGAGTCCGAGATCTTTGGTCTGCCCCGTCGGCCGGTGGAGCCC
AGAGAACAGACTTCGGATGATATCATAGCGCTAGAGACGAAGCGTCGTAC
ATTCTGGGCGTGCTTCATTTTGGACCGTTGCTTGAGCAGCGGCAAATATC
GACCTCGTATGATCCGCGTCAAGGAGCTGGGTATCCAGCTTCCCAGCGAT
AACGCCTTTGCATTTGGAGAACGGGTCCGCACCTCCCGTCTCAGTGAGCC
GGCTGCACGCCGCCCACAATCGTTCGGGTCCCAGGGCGTCCAGATTCCGA
GCATCCGGCAGAGTCTGGGTGCTCTCGGTGACGACCGCTTACCCAGTAAT
GGCGCTCCCGATCCCAAGTCTTCCTGGTCACCTGTCTCGCGCCGTAAGGA
TTCGAGTGAGGATGAAATTGATCGATGGGAGGTTGGTGCCGAGGAATCTG
TGCTCAGTCGGGTGATTCGTATCATTCGCATTTGGGGAAGCATTGCCAAG
TGGTCGTGCGCTGGGGGGCGAAGGTAAGCTGCCGCTCTTCAATGATGGTC
CCCGTCGAGGGTCTAACACACAACTACAGGAACGAACAGTTGCCCCCATG
GCACCCAGACTCGCGTTTCTCCCAGCTTCGAGCGATGCTGGGCGAGTTCC
AGGATAGCCTTTCACGCAACTTGCAGTACTCTCCACGGAACACGGATACG
CACATCATGTATAAGAATACCCTCTCCCCGTATACGGTCATGCACGTGGT
CTATTTCCTGTCGGTCATCGTCCTTCATCGTGCGTATATCCCGTTCCTTC
CTGTACGATGCTCGGAGCCTGTTGGACCCTTGGACGAGCCCCTATTCCCC
GTGGAAAAGCCCGGTGTGGCAGAGGCTTTCTGGCGTGAGAGCGCTCGAGA
GCTCTTCAATGCCGCCCGACAGATGATTGATCTGGCGGTAACCTGCCAAG
ACCGCGGCGTCCTGGTTGAAAACCCTCTCGTCGGCTTTGCTGTCTATAAC
GCCGCCTTTATCGGTGTGTATGCAGCCCATTTCCCTCATATGGATCCGGA
GGGCGCTTTGGCTCCGAGAGATCGTACCACTCAAGGTCAGGCACAAGCTC
GTAACGCCCTTGACATCCTGCGCGACATGCGGCTGCGTCTGAAGATGGCG
CGGGGATGGTTCCGCACCCTCAACCGGCTGCATAGTTATTTCGCCAAGGT
CAAGCGCGATTTCCGGCGATCTTCTCGGAAGATGGACATGGATGGCGTCG
ATGTGCATATGAACGGGGTTCGTCCAGTGCGTGAAGGCGGAGCTGGTGGG
GGTCTTGAGGAATTCAAGCTATTGGAGAAGTTGTTCTTGGAGTTCGGTAT
CATCGAAGACCAACTGCCTGATAACACAGCGGAGGATGATGGCCTGGCAG
CAGTCAGCGATCGTGCGACCAACCTGAGCGATGCAGGCAGCAATGCTGTT
CGCAGCGAAACTGGAGACACAGGCGAGCCTCCACTGGACGGTGCTGGCGG
ACGACGTGAGTCTTGGGTTCCCATCAATAGCCCTGGTATGCCGCTTCCTG
GACCGGATGGAGAGCGACGGCCTAGTCTGCCTCTACCCCCAGGCCGCTCC
CTGCAGTCCCAATCTCCGTACTCTCTACCCTCTCTCCAGCACCATCCTGA
CGCTGGGTTATACAACTCCTCCTCCCCCAATCTGCCATCGCTGGGACCCC
CAGGCCCATACGGGGCCCCGCCAACAACGACGGCAACAGCGTCCTCACAG
TATGGGGCACCGCCGCCCAACAACCGTTTGCAGCCCCTCAATTCATGGCT
GAACAATCGTCAGCAGCCTCCCCCGCCATATTCGCAGTCACTGCCGCCCA
TCAATGCGGCTACTTCACACAGCTTGCCATTGCTGCCCCCACCTGGCTCA
GTCGGCCACCCGGGAGCGTCACCGCCGGTAACAGTTGATGGTCTTGACAC
GGTCAACACCAACGGGCTGTGGTCGACCAGCCTGGGCGGAGATGATGTGC
TGGCGTTCTTGGAGGGATGTGAATACGACCAGCTGCCGGCGATGACGCCG
TCGGAGGTCGGTGTTCCGGTCGGGTGGCTCAGCACGGTGTGGACCGAGTT
CGCCCGCTGA
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Coding sequence (CDS) from alignment at An11:2022094..2025053+

>CBS51388_007172-T1 ID=CBS51388_007172-T1|Name=CBS51388_007172-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=5808bp|location=Sequence derived from alignment at An11:2022094..2025053+ (Aspergillus niger CBS 513.88)
ATGCGATCCAGTATCGCCTGCGCTCGTTGCCGTCGAAGCAAGATAAAATG
CGTCAACGCCGGCATCGATACCACCTGCCGCGCCTGTGAATCCTCCGGTC
GAGAATGTGTATATCCCGCCCCGGCCATCGGGGTGGGCGGAGGTGCCGCC
AAGCGAGACCTGGCCGCGCTGGCGGAGGGCGAGGAACGAAACAATGATTG
GGATAGCCCCAAGCGACAACGCTCACGGAAGGCCGTCGGCATCTCCTCGT
CCGCCGCAAAGGATGGGGGTAGATCCGCGCTCGACGTGCTCGATTCCTCA
GTCCTGACCACCAAGGTCTGGGACGCCGTCTTCGATCTCTTCCAGTCGCA
CTTTGCGACCATGCTTCCGTTCCTGCATCCCGCCTCGTTCATCGGTCAAA
CGCGCCAACTCTCCACCCCCTCGACCAATCCGTCCACAAATTCAGAACCC
TCGCGCGATCCCGCGCAAAGTCCGCCTGCAAGCAAGCCGGATCCCAATCC
GCTCATTCCCCTCGGTGTCCTCGCACTCACCGCCCGTTTCCATCCCCAGC
TGGTCGCTTTCCACTCTCCACCGTCCCCTGGAAACCCGTCCAATCCGCTT
GTCGCTTCGGAATTCTATGCGACGGCGTTGCGTAGCCGGCTGGCCGGCGT
CGACGGCGCTAGTCTCGCAGTCACGGACCTCACCCGGGTCCAAGCATTGC
TCATGCTGGCGCTGCATGAATGGGGCATGTGCCGTGGCAAGAGCGCATGG
TTGTATGTCGGAATGGCCATCCGGCTATCCCAAGCCATGGGCCTTCCCTT
CGAGCTGGAAAATGAGATGGCGTCCCGCGAGGGGCCCCGGTCCCCCGTAC
TGAAGATGGAGTCCGAGATCTTTGGTCTGCCCCGTCGGCCGGTGGAGCCC
AGAGAACAGACTTCGGATGATATCATAGCGCTAGAGACGAAGCGTCGTAC
ATTCTGGGCGTGCTTCATTTTGGACCGTTGCTTGAGCAGCGGCAAATATC
GACCTCGTATGATCCGCGTCAAGGAGCTGGGTATCCAGCTTCCCAGCGAT
AACGCCTTTGCATTTGGAGAACGGGTCCGCACCTCCCGTCTCAGTGAGCC
GGCTGCACGCCGCCCACAATCGTTCGGGTCCCAGGGCGTCCAGATTCCGA
GCATCCGGCAGAGTCTGGGTGCTCTCGGTGACGACCGCTTACCCAGTAAT
GGCGCTCCCGATCCCAAGTCTTCCTGGTCACCTGTCTCGCGCCGTAAGGA
TTCGAGTGAGGATGAAATTGATCGATGGGAGGTTGGTGCCGAGGAATCTG
TGCTCAGTCGGGTGATTCGTATCATTCGCATTTGGGGAAGCATTGCCAAG
TGGTCGTGCGCTGGGGGGCGAAGGAACGAACAGTTGCCCCCATGGCACCC
AGACTCGCGTTTCTCCCAGCTTCGAGCGATGCTGGGCGAGTTCCAGGATA
GCCTTTCACGCAACTTGCAGTACTCTCCACGGAACACGGATACGCACATC
ATGTATAAGAATACCCTCTCCCCGTATACGGTCATGCACGTGGTCTATTT
CCTGTCGGTCATCGTCCTTCATCGTGCGTATATCCCGTTCCTTCCTGTAC
GATGCTCGGAGCCTGTTGGACCCTTGGACGAGCCCCTATTCCCCGTGGAA
AAGCCCGGTGTGGCAGAGGCTTTCTGGCGTGAGAGCGCTCGAGAGCTCTT
CAATGCCGCCCGACAGATGATTGATCTGGCGGTAACCTGCCAAGACCGCG
GCGTCCTGGTTGAAAACCCTCTCGTCGGCTTTGCTGTCTATAACGCCGCC
TTTATCGGTGTGTATGCAGCCCATTTCCCTCATATGGATCCGGAGGGCGC
TTTGGCTCCGAGAGATCGTACCACTCAAGGTCAGGCACAAGCTCGTAACG
CCCTTGACATCCTGCGCGACATGCGGCTGCGTCTGAAGATGGCGCGGGGA
TGGTTCCGCACCCTCAACCGGCTGCATAGTTATTTCGCCAAGGTCAAGCG
CGATTTCCGGCGATCTTCTCGGAAGATGGACATGGATGGCGTCGATGTGC
ATATGAACGGGGTTCGTCCAGTGCGTGAAGGCGGAGCTGGTGGGGGTCTT
GAGGAATTCAAGCTATTGGAGAAGTTGTTCTTGGAGTTCGGTATCATCGA
AGACCAACTGCCTGATAACACAGCGGAGGATGATGGCCTGGCAGCAGTCA
GCGATCGTGCGACCAACCTGAGCGATGCAGGCAGCAATGCTGTTCGCAGC
GAAACTGGAGACACAGGCGAGCCTCCACTGGACGGTGCTGGCGGACGACG
TGAGTCTTGGGTTCCCATCAATAGCCCTGGTATGCCGCTTCCTGGACCGG
ATGGAGAGCGACGGCCTAGTCTGCCTCTACCCCCAGGCCGCTCCCTGCAG
TCCCAATCTCCGTACTCTCTACCCTCTCTCCAGCACCATCCTGACGCTGG
GTTATACAACTCCTCCTCCCCCAATCTGCCATCGCTGGGACCCCCAGGCC
CATACGGGGCCCCGCCAACAACGACGGCAACAGCGTCCTCACAGTATGGG
GCACCGCCGCCCAACAACCGTTTGCAGCCCCTCAATTCATGGCTGAACAA
TCGTCAGCAGCCTCCCCCGCCATATTCGCAGTCACTGCCGCCCATCAATG
CGGCTACTTCACACAGCTTGCCATTGCTGCCCCCACCTGGCTCAGTCGGC
CACCCGGGAGCGTCACCGCCGGTAACAGTTGATGGTCTTGACACGGTCAA
CACCAACGGGCTGTGGTCGACCAGCCTGGGCGGAGATGATGTGCTGGCGT
TCTTGGAGGGATGTGAATACGACCAGCTGCCGGCGATGACGCCGTCGGAG
GTCGGTGTTCCGGTCGGGTGGCTCAGCACGGTGTGGACCGAGTTCGCCCG
CTGAATGCGATCCAGTATCGCCTGCGCTCGTTGCCGTCGAAGCAAGATAA
AATGCGTCAACGCCGGCATCGATACCACCTGCCGCGCCTGTGAATCCTCC
GGTCGAGAATGTGTATATCCCGCCCCGGCCATCGGGGTGGGCGGAGGTGC
CGCCAAGCGAGACCTGGCCGCGCTGGCGGAGGGCGAGGAACGAAACAATG
ATTGGGATAGCCCCAAGCGACAACGCTCACGGAAGGCCGTCGGCATCTCC
TCGTCCGCCGCAAAGGATGGGGGTAGATCCGCGCTCGACGTGCTCGATTC
CTCAGTCCTGACCACCAAGGTCTGGGACGCCGTCTTCGATCTCTTCCAGT
CGCACTTTGCGACCATGCTTCCGTTCCTGCATCCCGCCTCGTTCATCGGT
CAAACGCGCCAACTCTCCACCCCCTCGACCAATCCGTCCACAAATTCAGA
ACCCTCGCGCGATCCCGCGCAAAGTCCGCCTGCAAGCAAGCCGGATCCCA
ATCCGCTCATTCCCCTCGGTGTCCTCGCACTCACCGCCCGTTTCCATCCC
CAGCTGGTCGCTTTCCACTCTCCACCGTCCCCTGGAAACCCGTCCAATCC
GCTTGTCGCTTCGGAATTCTATGCGACGGCGTTGCGTAGCCGGCTGGCCG
GCGTCGACGGCGCTAGTCTCGCAGTCACGGACCTCACCCGGGTCCAAGCA
TTGCTCATGCTGGCGCTGCATGAATGGGGCATGTGCCGTGGCAAGAGCGC
ATGGTTGTATGTCGGAATGGCCATCCGGCTATCCCAAGCCATGGGCCTTC
CCTTCGAGCTGGAAAATGAGATGGCGTCCCGCGAGGGGCCCCGGTCCCCC
GTACTGAAGATGGAGTCCGAGATCTTTGGTCTGCCCCGTCGGCCGGTGGA
GCCCAGAGAACAGACTTCGGATGATATCATAGCGCTAGAGACGAAGCGTC
GTACATTCTGGGCGTGCTTCATTTTGGACCGTTGCTTGAGCAGCGGCAAA
TATCGACCTCGTATGATCCGCGTCAAGGAGCTGGGTATCCAGCTTCCCAG
CGATAACGCCTTTGCATTTGGAGAACGGGTCCGCACCTCCCGTCTCAGTG
AGCCGGCTGCACGCCGCCCACAATCGTTCGGGTCCCAGGGCGTCCAGATT
CCGAGCATCCGGCAGAGTCTGGGTGCTCTCGGTGACGACCGCTTACCCAG
TAATGGCGCTCCCGATCCCAAGTCTTCCTGGTCACCTGTCTCGCGCCGTA
AGGATTCGAGTGAGGATGAAATTGATCGATGGGAGGTTGGTGCCGAGGAA
TCTGTGCTCAGTCGGGTGATTCGTATCATTCGCATTTGGGGAAGCATTGC
CAAGTGGTCGTGCGCTGGGGGGCGAAGGAACGAACAGTTGCCCCCATGGC
ACCCAGACTCGCGTTTCTCCCAGCTTCGAGCGATGCTGGGCGAGTTCCAG
GATAGCCTTTCACGCAACTTGCAGTACTCTCCACGGAACACGGATACGCA
CATCATGTATAAGAATACCCTCTCCCCGTATACGGTCATGCACGTGGTCT
ATTTCCTGTCGGTCATCGTCCTTCATCGTGCGTATATCCCGTTCCTTCCT
GTACGATGCTCGGAGCCTGTTGGACCCTTGGACGAGCCCCTATTCCCCGT
GGAAAAGCCCGGTGTGGCAGAGGCTTTCTGGCGTGAGAGCGCTCGAGAGC
TCTTCAATGCCGCCCGACAGATGATTGATCTGGCGGTAACCTGCCAAGAC
CGCGGCGTCCTGGTTGAAAACCCTCTCGTCGGCTTTGCTGTCTATAACGC
CGCCTTTATCGGTGTGTATGCAGCCCATTTCCCTCATATGGATCCGGAGG
GCGCTTTGGCTCCGAGAGATCGTACCACTCAAGGTCAGGCACAAGCTCGT
AACGCCCTTGACATCCTGCGCGACATGCGGCTGCGTCTGAAGATGGCGCG
GGGATGGTTCCGCACCCTCAACCGGCTGCATAGTTATTTCGCCAAGGTCA
AGCGCGATTTCCGGCGATCTTCTCGGAAGATGGACATGGATGGCGTCGAT
GTGCATATGAACGGGGTTCGTCCAGTGCGTGAAGGCGGAGCTGGTGGGGG
TCTTGAGGAATTCAAGCTATTGGAGAAGTTGTTCTTGGAGTTCGGTATCA
TCGAAGACCAACTGCCTGATAACACAGCGGAGGATGATGGCCTGGCAGCA
GTCAGCGATCGTGCGACCAACCTGAGCGATGCAGGCAGCAATGCTGTTCG
CAGCGAAACTGGAGACACAGGCGAGCCTCCACTGGACGGTGCTGGCGGAC
GACGTGAGTCTTGGGTTCCCATCAATAGCCCTGGTATGCCGCTTCCTGGA
CCGGATGGAGAGCGACGGCCTAGTCTGCCTCTACCCCCAGGCCGCTCCCT
GCAGTCCCAATCTCCGTACTCTCTACCCTCTCTCCAGCACCATCCTGACG
CTGGGTTATACAACTCCTCCTCCCCCAATCTGCCATCGCTGGGACCCCCA
GGCCCATACGGGGCCCCGCCAACAACGACGGCAACAGCGTCCTCACAGTA
TGGGGCACCGCCGCCCAACAACCGTTTGCAGCCCCTCAATTCATGGCTGA
ACAATCGTCAGCAGCCTCCCCCGCCATATTCGCAGTCACTGCCGCCCATC
AATGCGGCTACTTCACACAGCTTGCCATTGCTGCCCCCACCTGGCTCAGT
CGGCCACCCGGGAGCGTCACCGCCGGTAACAGTTGATGGTCTTGACACGG
TCAACACCAACGGGCTGTGGTCGACCAGCCTGGGCGGAGATGATGTGCTG
GCGTTCTTGGAGGGATGTGAATACGACCAGCTGCCGGCGATGACGCCGTC
GGAGGTCGGTGTTCCGGTCGGGTGGCTCAGCACGGTGTGGACCGAGTTCG
CCCGCTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO:0042025host cell nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006351transcription, DNA-templated
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_007172CBS51388_007172Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007172-T1.exon1CBS51388_007172-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_007172-T1.exon2CBS51388_007172-T1.exon2Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007172-T1.cdsCBS51388_007172-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007172-T1CBS51388_007172-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR007219
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
DBxrefPFAM:PF04082
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An11supercontigAn11:2022094..2025053 +
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