You are here

Home

CBS51388_007178-T1, CBS51388_007178-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_007178-T1
Unique NameCBS51388_007178-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An11:2045667..2049227-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_007178-T1 ID=CBS51388_007178-T1|Name=CBS51388_007178-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=3561bp|location=Sequence derived from alignment at An11:2045667..2049227- (Aspergillus niger CBS 513.88)
ATGTCTCAGCCAACAACCGCAGACTGGTTCCAAAGCCCTCAGGGCGCCGA
CTACCCCATACAACTTTACAAACGCTGCTGTTCATGGCGTAAATGCTTCC
TTATAATTGACCTTGCGGGGGACAATATCCAAATAAATGCCAAGTCTCAG
GTCATTTTGGACTCTCAGCAGCCGTTCCTCGCCATCTGCCTAGAAAATAA
GGACCAGGGAGAGGTCATTTTTCCATTCCAGGGAATTCACCTCAACTGTG
GGATTGAAGGTGACGCGGCGGATACCGACCACTGGATCGACAATATGAGG
GCAACGTATTCGCTTCTCCCTAAAAATGAGAAGTTCTACTATTACGTAGT
AAGGTGCAAAAGCTCGCCGGTGTTTACCAAGGTCCAAAGGCCGTTGATGA
GTGAAGAGCTCGAGGAAAAATTGAGGACGCTCAGGAACATCAATTGGTTG
AATTGCGACCTAGTTATCTTACTTCAATATAGAAGTAGCTTCACCGATGT
CCCGCTCATGCTCAATTGGTCGATCAAACTCTACAATCTCGTGCATCAAG
GCTCCGAGGGGGAGGGATTCTGGTACTATCGCCAGAATCCAGAATCAGAC
GTCACCAAGCGGCATCCTGAAATGCCATGGCTCTGGACCAGTACTGAAGG
CAGGCGGGAATACATGAAGTGGAAACCCCACAACCCCCTGTTCTTCGACG
ACAACGACCGCATTTGTCGTCTTCTTAAGGCCTCAAAGAATGAACGCTAC
CAGCAACAGCGGGAAGTTTCTGACGTCTTCAACCCCACCCGGTGTCATGA
GGCGTGGTGCACTGAGAGTGATTTCGGGCTACCGGGTAGCACGCACCTGG
TGCACATCAAGCTTTTGCCAGTCCGGCCAAGTGACAATGTGGTCATTCCC
AAATTGCAGGAGGGCGCCAAGGTGCACTTCGAGTGGGCTCTCCAAGGTGT
CCCCTACGGCATGGATTCGAAGCTCATTGATCAGGGAGCCGTCACTCAGA
TTGACTCCAATGCTGACCTTGTTCTCCGTGTGACAGGCCAGGCCACACAA
GCTTTGGGCGAACGCTTTCCCATTGTCACATCAGCAGTGGCAAACACGAT
GCCCATTGACGCCCAGATTGAGGCTCTTGGGGAGGCAAGTAAACTAGCAC
TTGTCTTCGGGGATCGTTCAGGAAATGAAGGCCAGGGTTTCTCGCTGAGG
CGCACTCTCCTTGCTCATGGAACCGAGCTCGAGCAAGGAAATCAAGGCTA
CTTTACCCTTGATGTCCGCCAAATGTCACCCGTGCCGCCGAATCTTCAGC
AAGAGAGGGTGGAATACCTTTCGCACATCTTCCGGCTTGACGAGGCCCAG
AAAGAGGCCTTCCAGGCTTCGCTGGTAAAAATTGTGTGCGGAGTTAGCCT
GATTCAAGGTCCTCCGGGAACTGGAAAAACCAGTACAGCCAAGGCAATTA
TTTGCACTGCGGCAGCTCTTGGCTGCAAGATTCTCCTGGTTGCTGGGTCC
AACAAGGGGGTGGACAACCTTGCTGAGGCGGTAACTAAAGCCCTCCAACG
GGACAAGCGACTACAAAGCTGGTGTGGCCAGCTCGTCAGATTCCGCACAC
CGCGCTACCAGCTCGAAAGAGCGAGGGGTGGTGAACCTTCAGATGAGAAC
GATAATCTGAGTAACGTTCAAGCTCACGTCCTCACTATCCAGTACGCCCA
GGACCATGCCACCACCGACAAATACGCCCGGTCTCTATTAGAACGTCTTG
CAGCAGATAAGCAGCGACGACTGAGCAGGGAAGAGCGCAAGGGTCTGAAA
GGGGACTATGAACACTGCGTCATGAAGGTCCTGCAGAACGCCAAGATCGT
TGCCACAACCTTGAGCAACGCGTCCCAGGATCTTCTGAGACGTTCAGGGT
TCGAGCCTGCCTTCGTGGTTTGCGACGAGGCAGGGCAATGCCAGGAAGGC
GAAATCACCATCGCCCTGACCATCCCATCGACTAGGGTAATGGTCTTGAT
TGGAGACCCGGAGCAACTCCCGCCAACTGTTGTCTCAGAACACGCGACCA
ATGAGGGCGCGTTGTACCTGAAGAGGTCAATGATGGAGAGGCTGCACGAA
GCAGGCTACCCCTGCACTATGCTGTTGACCAACTACCGCAGCCACAGCCA
CATCTTCGACATCTTCAACCGGTTAATCTACAAGGGTGCGTTGAGGTTGG
GTCCCAACAATGACAGCGAACAGCGCGTCGGGAAGGTCTGGGATGCCTTC
ACCCGCTCTCATCACCACTTCTGCGGTTACGGTGTGGTGGGAGTTCGCCG
CCTTTTCATCAGTGTGATAGGGGAGGCCGTTCGTGCTGAGGGTAGCCAGT
CGTGGTCCAACCAGTCGCAGGGTATGGTCGCTGTGCATCTTCTCAAAAAC
CTGTACGCCTATCGGACGAGTGATGGTCAATCCATTCGTCCAGAAGATGT
TATGGTGATCTCTCCGTATGCGGCGCAGCGAGCTTTGGTCGGAAGGCTCA
TGGGCGAGCACGGGGTAAGCTGCCGGGACAATCTTACTGTGGATGCATCG
CAGGGTCAAGAAGCTCCCATGGTAATCTTCATGCTGACGAAGCCGTCGAG
GGACGCCGCCAGTGTTGGTTTTATTGCCGACCAGCAACGGCTCAATGTTG
CACTGAGCCGTGCACGCGAAGTCCTCGTCATTGTCGGGAATCTCCTTGTC
TGGAATAGAGAGACCCTTGACAAGATCGAAAAGTCTCTTGGCAAGAAGGC
CAGGTTCCTCCTTAATCTTCTTTTTGACGTGAGCAAGCGTAATCACACCA
TGGTGTGGAAAGGTGAAGCCACGGTCGAAGATAAGAAACCTGTCGGGCCA
GTGGAATACAAGTGCCCTGACCGATTTGTTCCGCCATTTTACGAGACGGC
CGCCGTCCCCTCCGCCCCCGTTTCCTCCGCACTCCTCCCCGCTCGCACCC
CTCAGCGCCCCGCCCAAGCGTCCGGTGGGTCCTTCTCTGCGGCGCCCTGG
AGGCCGTCTGCTAGATCTGTTCTTGGAGTCGAGGGACGAGAAACATTATC
TCGACCGACGCCACGGGTAAACATGCCCGTTGGTTCGTCGTGGCAGGCAC
CTGTCGTTCGTCTGCCAACGTCCACAAGCCAATCAAGGGACATCGAGGAA
GATGTCAGCATGGTGGACATTGAGAAACCCGAGGGCCGAGATCTCGTACA
GCAAACCGGCAGTCCGCCCTCTCCTGTCCTCCCTCCCCGGCATGCTCGCC
AAAGGTCCCGCTCTCCCCCTCATCGCGAGGCGACGTATCGTGAAGCGACG
TATCGCGAGCGGCCTCGCTCCCCTTCGCGCGCCATCGACAACCGACTCCT
TACACGGGGTGGTCTGCCTCAGGTCAGTCTAGTTCCTCGAGACAATTTCG
ACTCAATACCAGTCGAGGAACTGGAGAGACAGTTTAGGCTTAGCCGCGCC
GCTGAAGAAATGGCTGCTGCAACCCTCCGGCGTACGTTGATTGAGGAGGA
GCTCCGTGTGAGGGGCGACTGGGATAGTCGCAACAGAGACGACCAACGAG
ATGGTCGGTAG
back to top

Coding sequence (CDS) from alignment at An11:2045667..2049227-

>CBS51388_007178-T1 ID=CBS51388_007178-T1|Name=CBS51388_007178-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3561bp|location=Sequence derived from alignment at An11:2045667..2049227- (Aspergillus niger CBS 513.88)
ATGTCTCAGCCAACAACCGCAGACTGGTTCCAAAGCCCTCAGGGCGCCGA
CTACCCCATACAACTTTACAAACGCTGCTGTTCATGGCGTAAATGCTTCC
TTATAATTGACCTTGCGGGGGACAATATCCAAATAAATGCCAAGTCTCAG
GTCATTTTGGACTCTCAGCAGCCGTTCCTCGCCATCTGCCTAGAAAATAA
GGACCAGGGAGAGGTCATTTTTCCATTCCAGGGAATTCACCTCAACTGTG
GGATTGAAGGTGACGCGGCGGATACCGACCACTGGATCGACAATATGAGG
GCAACGTATTCGCTTCTCCCTAAAAATGAGAAGTTCTACTATTACGTAGT
AAGGTGCAAAAGCTCGCCGGTGTTTACCAAGGTCCAAAGGCCGTTGATGA
GTGAAGAGCTCGAGGAAAAATTGAGGACGCTCAGGAACATCAATTGGTTG
AATTGCGACCTAGTTATCTTACTTCAATATAGAAGTAGCTTCACCGATGT
CCCGCTCATGCTCAATTGGTCGATCAAACTCTACAATCTCGTGCATCAAG
GCTCCGAGGGGGAGGGATTCTGGTACTATCGCCAGAATCCAGAATCAGAC
GTCACCAAGCGGCATCCTGAAATGCCATGGCTCTGGACCAGTACTGAAGG
CAGGCGGGAATACATGAAGTGGAAACCCCACAACCCCCTGTTCTTCGACG
ACAACGACCGCATTTGTCGTCTTCTTAAGGCCTCAAAGAATGAACGCTAC
CAGCAACAGCGGGAAGTTTCTGACGTCTTCAACCCCACCCGGTGTCATGA
GGCGTGGTGCACTGAGAGTGATTTCGGGCTACCGGGTAGCACGCACCTGG
TGCACATCAAGCTTTTGCCAGTCCGGCCAAGTGACAATGTGGTCATTCCC
AAATTGCAGGAGGGCGCCAAGGTGCACTTCGAGTGGGCTCTCCAAGGTGT
CCCCTACGGCATGGATTCGAAGCTCATTGATCAGGGAGCCGTCACTCAGA
TTGACTCCAATGCTGACCTTGTTCTCCGTGTGACAGGCCAGGCCACACAA
GCTTTGGGCGAACGCTTTCCCATTGTCACATCAGCAGTGGCAAACACGAT
GCCCATTGACGCCCAGATTGAGGCTCTTGGGGAGGCAAGTAAACTAGCAC
TTGTCTTCGGGGATCGTTCAGGAAATGAAGGCCAGGGTTTCTCGCTGAGG
CGCACTCTCCTTGCTCATGGAACCGAGCTCGAGCAAGGAAATCAAGGCTA
CTTTACCCTTGATGTCCGCCAAATGTCACCCGTGCCGCCGAATCTTCAGC
AAGAGAGGGTGGAATACCTTTCGCACATCTTCCGGCTTGACGAGGCCCAG
AAAGAGGCCTTCCAGGCTTCGCTGGTAAAAATTGTGTGCGGAGTTAGCCT
GATTCAAGGTCCTCCGGGAACTGGAAAAACCAGTACAGCCAAGGCAATTA
TTTGCACTGCGGCAGCTCTTGGCTGCAAGATTCTCCTGGTTGCTGGGTCC
AACAAGGGGGTGGACAACCTTGCTGAGGCGGTAACTAAAGCCCTCCAACG
GGACAAGCGACTACAAAGCTGGTGTGGCCAGCTCGTCAGATTCCGCACAC
CGCGCTACCAGCTCGAAAGAGCGAGGGGTGGTGAACCTTCAGATGAGAAC
GATAATCTGAGTAACGTTCAAGCTCACGTCCTCACTATCCAGTACGCCCA
GGACCATGCCACCACCGACAAATACGCCCGGTCTCTATTAGAACGTCTTG
CAGCAGATAAGCAGCGACGACTGAGCAGGGAAGAGCGCAAGGGTCTGAAA
GGGGACTATGAACACTGCGTCATGAAGGTCCTGCAGAACGCCAAGATCGT
TGCCACAACCTTGAGCAACGCGTCCCAGGATCTTCTGAGACGTTCAGGGT
TCGAGCCTGCCTTCGTGGTTTGCGACGAGGCAGGGCAATGCCAGGAAGGC
GAAATCACCATCGCCCTGACCATCCCATCGACTAGGGTAATGGTCTTGAT
TGGAGACCCGGAGCAACTCCCGCCAACTGTTGTCTCAGAACACGCGACCA
ATGAGGGCGCGTTGTACCTGAAGAGGTCAATGATGGAGAGGCTGCACGAA
GCAGGCTACCCCTGCACTATGCTGTTGACCAACTACCGCAGCCACAGCCA
CATCTTCGACATCTTCAACCGGTTAATCTACAAGGGTGCGTTGAGGTTGG
GTCCCAACAATGACAGCGAACAGCGCGTCGGGAAGGTCTGGGATGCCTTC
ACCCGCTCTCATCACCACTTCTGCGGTTACGGTGTGGTGGGAGTTCGCCG
CCTTTTCATCAGTGTGATAGGGGAGGCCGTTCGTGCTGAGGGTAGCCAGT
CGTGGTCCAACCAGTCGCAGGGTATGGTCGCTGTGCATCTTCTCAAAAAC
CTGTACGCCTATCGGACGAGTGATGGTCAATCCATTCGTCCAGAAGATGT
TATGGTGATCTCTCCGTATGCGGCGCAGCGAGCTTTGGTCGGAAGGCTCA
TGGGCGAGCACGGGGTAAGCTGCCGGGACAATCTTACTGTGGATGCATCG
CAGGGTCAAGAAGCTCCCATGGTAATCTTCATGCTGACGAAGCCGTCGAG
GGACGCCGCCAGTGTTGGTTTTATTGCCGACCAGCAACGGCTCAATGTTG
CACTGAGCCGTGCACGCGAAGTCCTCGTCATTGTCGGGAATCTCCTTGTC
TGGAATAGAGAGACCCTTGACAAGATCGAAAAGTCTCTTGGCAAGAAGGC
CAGGTTCCTCCTTAATCTTCTTTTTGACGTGAGCAAGCGTAATCACACCA
TGGTGTGGAAAGGTGAAGCCACGGTCGAAGATAAGAAACCTGTCGGGCCA
GTGGAATACAAGTGCCCTGACCGATTTGTTCCGCCATTTTACGAGACGGC
CGCCGTCCCCTCCGCCCCCGTTTCCTCCGCACTCCTCCCCGCTCGCACCC
CTCAGCGCCCCGCCCAAGCGTCCGGTGGGTCCTTCTCTGCGGCGCCCTGG
AGGCCGTCTGCTAGATCTGTTCTTGGAGTCGAGGGACGAGAAACATTATC
TCGACCGACGCCACGGGTAAACATGCCCGTTGGTTCGTCGTGGCAGGCAC
CTGTCGTTCGTCTGCCAACGTCCACAAGCCAATCAAGGGACATCGAGGAA
GATGTCAGCATGGTGGACATTGAGAAACCCGAGGGCCGAGATCTCGTACA
GCAAACCGGCAGTCCGCCCTCTCCTGTCCTCCCTCCCCGGCATGCTCGCC
AAAGGTCCCGCTCTCCCCCTCATCGCGAGGCGACGTATCGTGAAGCGACG
TATCGCGAGCGGCCTCGCTCCCCTTCGCGCGCCATCGACAACCGACTCCT
TACACGGGGTGGTCTGCCTCAGGTCAGTCTAGTTCCTCGAGACAATTTCG
ACTCAATACCAGTCGAGGAACTGGAGAGACAGTTTAGGCTTAGCCGCGCC
GCTGAAGAAATGGCTGCTGCAACCCTCCGGCGTACGTTGATTGAGGAGGA
GCTCCGTGTGAGGGGCGACTGGGATAGTCGCAACAGAGACGACCAACGAG
ATGGTCGGTAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_007178CBS51388_007178Aspergillus niger CBS 513.88gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007178-T1.cdsCBS51388_007178-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007178-T1.exon1CBS51388_007178-T1.exon1Aspergillus niger CBS 513.88exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007178-T1CBS51388_007178-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR041679
DBxrefInterPro:IPR041677
DBxrefPFAM:PF13245
DBxrefPFAM:PF13087
DBxrefPFAM:PF13086
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An11supercontigAn11:2045667..2049227 -
Powered by Drupal