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Sequences
The following sequences are available for this feature:
mRNA from alignment at An11:2058587..2060107- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_007179-T1 ID=CBS51388_007179-T1|Name=CBS51388_007179-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1521bp|location=Sequence derived from alignment at An11:2058587..2060107- (Aspergillus niger CBS 513.88)
ATGACCTGGTCCACGTCCTTTCTCGTGGCTACTTCTTTGCTCTCCATCAT
CAACTCGGTCCATGCTCAACTAACAGGATCTGTTGGACCCCTGACCTCCG
TTATAGATAAGGCCGCTGTGAAGACCTGCAACGTCTGCGACTACGGAGCC
AGCTCGGACAACACCACCGGTGTGGGACAGCCCATTATCGACGCCTTCAC
CGACTGCGGTAGCGGTGGTCTCATTCACGTCCCTGAGGGTGACTATCTTT
TGAAAGACTGGGTCTCTTCGGAAAACGGCTCCGCGTGGTCTATCCAGCTC
GATGGCGTGCTCCACTGGGACTCCTCGCCTTCCGCCCAGTCGTACATATT
CGCGATAACCGGTGGCAGTGACTCTGAGCTTTCTAGTTCAAATGCAACGG
GTGCAATTCAAGGTAGCGGTTACCTTTACCACCGACATAATACGTACACT
AGTCCCCGGATGCTGTACATTTCCGGGTGTCGGATTGGACCGTTCATGAC
CTGGTATTGGTCAACTCGCCTATGCCCCACTTTGTCATTGACGGCGGTTA
CAATGGAGAAGCGTACAATATGGCTATCTGTGGTGGTGATCACGGTGGTC
TGGATGGCATTGATTTGTACGGTGGCAACATCTGGATTCATTTAGTGCCG
CTTCTCCTGAACGTGCATTCGATTTCAGGAAACGCTAATGCGACGGCAGG
TAATGGTCACCAACAAGGATGAATGTGTCACTAGCAAGGTAGGTGGATCG
CATTACCTCGCAACTGCGGATGTACTAATCCAAACTGCAACAGACCAAAC
TCCCACAACTTCCTGATCGAGAATATTTACTGCAACCCCAGTGGCGGATG
CGCCATCGGATCCCTGGGTTCCAGTGTCAACGTCACCAACATCCTCTACC
GCAACGTCTACACCTGGGACTCGAACCAAATGATGATGATCAAGACCAAC
GGTGGCTTAGGCAATGTATCCAACATAGTGTTTGAGAATTTCATCGGTAC
ATAACCTTATATCTTCCTTACCCTTCCACGACACACAACCTAATGATAGA
ATAGGCCACGGAAACGTCAACTCCCTCGACCTCGATAGTTACTGGAGCAG
CATGAACGCTATCGACGGCGTCGGCATCTACTATCACAACATCACAATTT
ATAATTGGACGGGGACCGCCATCGACGGTGAAACTCGGCCGCCTATTCGG
GTCATCTGCCCTGAAGACATGCCCTGTACCGAGATCACGCTCGTCCAGAT
TGACTTGTTGGTTGAGGAAGGTCGTTACGATGAATACTACTGCGCGATTG
CTTGCGGATAGGGCTACTGCCTTGACTCTGCTACTAGCACCTTGACTACT
TACACAACCACTACTTATGGGAACTCTGCTTCAACAGGATACGAGGCGCC
CACTATGGCTGATGATTTGGCCACCGCGTTTGGTACAACGGCGTCTATTC
CTACCCCTACTACCCCGGCTTCGTTCTTCCCCGGTGTTGCGCCGGTTAGC
GCCGTAGCTGGGAGTTCTTGA back to topCoding sequence (CDS) from alignment at An11:2058587..2060107- >CBS51388_007179-T1 ID=CBS51388_007179-T1|Name=CBS51388_007179-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=6660bp|location=Sequence derived from alignment at An11:2058587..2060107- (Aspergillus niger CBS 513.88)
GATACGAGGCGCCCACTATGGCTGATGATTTGGCCACCGCGTTTGGTACA
ACGGCGTCTATTCCTACCCCTACTACCCCGGCTTCGTTCTTCCCCGGTGT
TGCGCCGGTTAGCGCCGTAGCTGGGAGTTCTTGAGCCACGGAAACGTCAA
CTCCCTCGACCTCGATAGTTACTGGAGCAGCATGAACGCTATCGACGGCG
TCGGCATCTACTATCACAACATCACAATTTATAATTGGACGGGGACCGCC
ATCGACGGTGAAACTCGGCCGCCTATTCGGGTCATCTGCCCTGAAGACAT
GCCCTGTACCGAGATCACGCTCGTCCAGATTGACTTGTTGGTTGAGGAAG
ACCAAACTCCCACAACTTCCTGATCGAGAATATTTACTGCAACCCCAGTG
GCGGATGCGCCATCGGATCCCTGGGTTCCAGTGTCAACGTCACCAACATC
CTCTACCGCAACGTCTACACCTGGGACTCGAACCAAATGATGATGATCAA
GACCAACGGTGGCTTAGGCAATGTATCCAACATAGTGTTTGAGAATTTCA
TCGTCCCCGGATGCTGTACATTTCCGGGTGTCGGATTGGACCGTTCATGA
CCTGGTATTGGTCAACTCGCCTATGCCCCACTTTGTCATTGACGGCGGTT
ACAATGGAGAAGCGTACAATATGGCTATCTGTGGTGGTGATCACGGTGGT
CTGGATGGCATTGATTTTTCAAATGCAACGGGTGCAATTCAAGATGACCT
GGTCCACGTCCTTTCTCGTGGCTACTTCTTTGCTCTCCATCATCAACTCG
GTCCATGCTCAACTAACAGGATCTGTTGGACCCCTGACCTCCGTTATAGA
TAAGGCCGCTGTGAAGACCTGCAACGTCTGCGACTACGGAGCCAGCTCGG
ACAACACCACCGGTGTGGGACAGCCCATTATCGACGCCTTCACCGACTGC
GGTAGCGGTGGTCTCATTCACGTCCCTGAGGGTGACTATCTTTTGAAAGA
CTGGGTCTCTTCGGAAAACGGCTCCGCGTGGTCTATCCAGCTCGATGGCG
TGCTCCACTGGGACTCCTCGCCTTCCGCCCAGTCGTACATATTCGCGATA
ACCGGTGGCAGATACGAGGCGCCCACTATGGCTGATGATTTGGCCACCGC
GTTTGGTACAACGGCGTCTATTCCTACCCCTACTACCCCGGCTTCGTTCT
TCCCCGGTGTTGCGCCGGTTAGCGCCGTAGCTGGGAGTTCTTGAGCCACG
GAAACGTCAACTCCCTCGACCTCGATAGTTACTGGAGCAGCATGAACGCT
ATCGACGGCGTCGGCATCTACTATCACAACATCACAATTTATAATTGGAC
GGGGACCGCCATCGACGGTGAAACTCGGCCGCCTATTCGGGTCATCTGCC
CTGAAGACATGCCCTGTACCGAGATCACGCTCGTCCAGATTGACTTGTTG
GTTGAGGAAGACCAAACTCCCACAACTTCCTGATCGAGAATATTTACTGC
AACCCCAGTGGCGGATGCGCCATCGGATCCCTGGGTTCCAGTGTCAACGT
CACCAACATCCTCTACCGCAACGTCTACACCTGGGACTCGAACCAAATGA
TGATGATCAAGACCAACGGTGGCTTAGGCAATGTATCCAACATAGTGTTT
GAGAATTTCATCGTCCCCGGATGCTGTACATTTCCGGGTGTCGGATTGGA
CCGTTCATGACCTGGTATTGGTCAACTCGCCTATGCCCCACTTTGTCATT
GACGGCGGTTACAATGGAGAAGCGTACAATATGGCTATCTGTGGTGGTGA
TCACGGTGGTCTGGATGGCATTGATTTTTCAAATGCAACGGGTGCAATTC
AAGATGACCTGGTCCACGTCCTTTCTCGTGGCTACTTCTTTGCTCTCCAT
CATCAACTCGGTCCATGCTCAACTAACAGGATCTGTTGGACCCCTGACCT
CCGTTATAGATAAGGCCGCTGTGAAGACCTGCAACGTCTGCGACTACGGA
GCCAGCTCGGACAACACCACCGGTGTGGGACAGCCCATTATCGACGCCTT
CACCGACTGCGGTAGCGGTGGTCTCATTCACGTCCCTGAGGGTGACTATC
TTTTGAAAGACTGGGTCTCTTCGGAAAACGGCTCCGCGTGGTCTATCCAG
CTCGATGGCGTGCTCCACTGGGACTCCTCGCCTTCCGCCCAGTCGTACAT
ATTCGCGATAACCGGTGGCAGATACGAGGCGCCCACTATGGCTGATGATT
TGGCCACCGCGTTTGGTACAACGGCGTCTATTCCTACCCCTACTACCCCG
GCTTCGTTCTTCCCCGGTGTTGCGCCGGTTAGCGCCGTAGCTGGGAGTTC
TTGAGCCACGGAAACGTCAACTCCCTCGACCTCGATAGTTACTGGAGCAG
CATGAACGCTATCGACGGCGTCGGCATCTACTATCACAACATCACAATTT
ATAATTGGACGGGGACCGCCATCGACGGTGAAACTCGGCCGCCTATTCGG
GTCATCTGCCCTGAAGACATGCCCTGTACCGAGATCACGCTCGTCCAGAT
TGACTTGTTGGTTGAGGAAGACCAAACTCCCACAACTTCCTGATCGAGAA
TATTTACTGCAACCCCAGTGGCGGATGCGCCATCGGATCCCTGGGTTCCA
GTGTCAACGTCACCAACATCCTCTACCGCAACGTCTACACCTGGGACTCG
AACCAAATGATGATGATCAAGACCAACGGTGGCTTAGGCAATGTATCCAA
CATAGTGTTTGAGAATTTCATCGTCCCCGGATGCTGTACATTTCCGGGTG
TCGGATTGGACCGTTCATGACCTGGTATTGGTCAACTCGCCTATGCCCCA
CTTTGTCATTGACGGCGGTTACAATGGAGAAGCGTACAATATGGCTATCT
GTGGTGGTGATCACGGTGGTCTGGATGGCATTGATTTTTCAAATGCAACG
GGTGCAATTCAAGATGACCTGGTCCACGTCCTTTCTCGTGGCTACTTCTT
TGCTCTCCATCATCAACTCGGTCCATGCTCAACTAACAGGATCTGTTGGA
CCCCTGACCTCCGTTATAGATAAGGCCGCTGTGAAGACCTGCAACGTCTG
CGACTACGGAGCCAGCTCGGACAACACCACCGGTGTGGGACAGCCCATTA
TCGACGCCTTCACCGACTGCGGTAGCGGTGGTCTCATTCACGTCCCTGAG
GGTGACTATCTTTTGAAAGACTGGGTCTCTTCGGAAAACGGCTCCGCGTG
GTCTATCCAGCTCGATGGCGTGCTCCACTGGGACTCCTCGCCTTCCGCCC
AGTCGTACATATTCGCGATAACCGGTGGCAGATACGAGGCGCCCACTATG
GCTGATGATTTGGCCACCGCGTTTGGTACAACGGCGTCTATTCCTACCCC
TACTACCCCGGCTTCGTTCTTCCCCGGTGTTGCGCCGGTTAGCGCCGTAG
CTGGGAGTTCTTGAGCCACGGAAACGTCAACTCCCTCGACCTCGATAGTT
ACTGGAGCAGCATGAACGCTATCGACGGCGTCGGCATCTACTATCACAAC
ATCACAATTTATAATTGGACGGGGACCGCCATCGACGGTGAAACTCGGCC
GCCTATTCGGGTCATCTGCCCTGAAGACATGCCCTGTACCGAGATCACGC
TCGTCCAGATTGACTTGTTGGTTGAGGAAGACCAAACTCCCACAACTTCC
TGATCGAGAATATTTACTGCAACCCCAGTGGCGGATGCGCCATCGGATCC
CTGGGTTCCAGTGTCAACGTCACCAACATCCTCTACCGCAACGTCTACAC
CTGGGACTCGAACCAAATGATGATGATCAAGACCAACGGTGGCTTAGGCA
ATGTATCCAACATAGTGTTTGAGAATTTCATCGTCCCCGGATGCTGTACA
TTTCCGGGTGTCGGATTGGACCGTTCATGACCTGGTATTGGTCAACTCGC
CTATGCCCCACTTTGTCATTGACGGCGGTTACAATGGAGAAGCGTACAAT
ATGGCTATCTGTGGTGGTGATCACGGTGGTCTGGATGGCATTGATTTTTC
AAATGCAACGGGTGCAATTCAAGATGACCTGGTCCACGTCCTTTCTCGTG
GCTACTTCTTTGCTCTCCATCATCAACTCGGTCCATGCTCAACTAACAGG
ATCTGTTGGACCCCTGACCTCCGTTATAGATAAGGCCGCTGTGAAGACCT
GCAACGTCTGCGACTACGGAGCCAGCTCGGACAACACCACCGGTGTGGGA
CAGCCCATTATCGACGCCTTCACCGACTGCGGTAGCGGTGGTCTCATTCA
CGTCCCTGAGGGTGACTATCTTTTGAAAGACTGGGTCTCTTCGGAAAACG
GCTCCGCGTGGTCTATCCAGCTCGATGGCGTGCTCCACTGGGACTCCTCG
CCTTCCGCCCAGTCGTACATATTCGCGATAACCGGTGGCAGATACGAGGC
GCCCACTATGGCTGATGATTTGGCCACCGCGTTTGGTACAACGGCGTCTA
TTCCTACCCCTACTACCCCGGCTTCGTTCTTCCCCGGTGTTGCGCCGGTT
AGCGCCGTAGCTGGGAGTTCTTGAGCCACGGAAACGTCAACTCCCTCGAC
CTCGATAGTTACTGGAGCAGCATGAACGCTATCGACGGCGTCGGCATCTA
CTATCACAACATCACAATTTATAATTGGACGGGGACCGCCATCGACGGTG
AAACTCGGCCGCCTATTCGGGTCATCTGCCCTGAAGACATGCCCTGTACC
GAGATCACGCTCGTCCAGATTGACTTGTTGGTTGAGGAAGACCAAACTCC
CACAACTTCCTGATCGAGAATATTTACTGCAACCCCAGTGGCGGATGCGC
CATCGGATCCCTGGGTTCCAGTGTCAACGTCACCAACATCCTCTACCGCA
ACGTCTACACCTGGGACTCGAACCAAATGATGATGATCAAGACCAACGGT
GGCTTAGGCAATGTATCCAACATAGTGTTTGAGAATTTCATCGTCCCCGG
ATGCTGTACATTTCCGGGTGTCGGATTGGACCGTTCATGACCTGGTATTG
GTCAACTCGCCTATGCCCCACTTTGTCATTGACGGCGGTTACAATGGAGA
AGCGTACAATATGGCTATCTGTGGTGGTGATCACGGTGGTCTGGATGGCA
TTGATTTTTCAAATGCAACGGGTGCAATTCAAGATGACCTGGTCCACGTC
CTTTCTCGTGGCTACTTCTTTGCTCTCCATCATCAACTCGGTCCATGCTC
AACTAACAGGATCTGTTGGACCCCTGACCTCCGTTATAGATAAGGCCGCT
GTGAAGACCTGCAACGTCTGCGACTACGGAGCCAGCTCGGACAACACCAC
CGGTGTGGGACAGCCCATTATCGACGCCTTCACCGACTGCGGTAGCGGTG
GTCTCATTCACGTCCCTGAGGGTGACTATCTTTTGAAAGACTGGGTCTCT
TCGGAAAACGGCTCCGCGTGGTCTATCCAGCTCGATGGCGTGCTCCACTG
GGACTCCTCGCCTTCCGCCCAGTCGTACATATTCGCGATAACCGGTGGCA
GATACGAGGCGCCCACTATGGCTGATGATTTGGCCACCGCGTTTGGTACA
ACGGCGTCTATTCCTACCCCTACTACCCCGGCTTCGTTCTTCCCCGGTGT
TGCGCCGGTTAGCGCCGTAGCTGGGAGTTCTTGAGCCACGGAAACGTCAA
CTCCCTCGACCTCGATAGTTACTGGAGCAGCATGAACGCTATCGACGGCG
TCGGCATCTACTATCACAACATCACAATTTATAATTGGACGGGGACCGCC
ATCGACGGTGAAACTCGGCCGCCTATTCGGGTCATCTGCCCTGAAGACAT
GCCCTGTACCGAGATCACGCTCGTCCAGATTGACTTGTTGGTTGAGGAAG
ACCAAACTCCCACAACTTCCTGATCGAGAATATTTACTGCAACCCCAGTG
GCGGATGCGCCATCGGATCCCTGGGTTCCAGTGTCAACGTCACCAACATC
CTCTACCGCAACGTCTACACCTGGGACTCGAACCAAATGATGATGATCAA
GACCAACGGTGGCTTAGGCAATGTATCCAACATAGTGTTTGAGAATTTCA
TCGTCCCCGGATGCTGTACATTTCCGGGTGTCGGATTGGACCGTTCATGA
CCTGGTATTGGTCAACTCGCCTATGCCCCACTTTGTCATTGACGGCGGTT
ACAATGGAGAAGCGTACAATATGGCTATCTGTGGTGGTGATCACGGTGGT
CTGGATGGCATTGATTTTTCAAATGCAACGGGTGCAATTCAAGATGACCT
GGTCCACGTCCTTTCTCGTGGCTACTTCTTTGCTCTCCATCATCAACTCG
GTCCATGCTCAACTAACAGGATCTGTTGGACCCCTGACCTCCGTTATAGA
TAAGGCCGCTGTGAAGACCTGCAACGTCTGCGACTACGGAGCCAGCTCGG
ACAACACCACCGGTGTGGGACAGCCCATTATCGACGCCTTCACCGACTGC
GGTAGCGGTGGTCTCATTCACGTCCCTGAGGGTGACTATCTTTTGAAAGA
CTGGGTCTCTTCGGAAAACGGCTCCGCGTGGTCTATCCAGCTCGATGGCG
TGCTCCACTGGGACTCCTCGCCTTCCGCCCAGTCGTACATATTCGCGATA
ACCGGTGGCA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0005975 | carbohydrate metabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004650 | polygalacturonase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-22) |
| Note | CAZy:GH28 |
| DBxref | InterPro:IPR011050 |
| DBxref | InterPro:IPR012334 |
| DBxref | InterPro:IPR000743 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An11 | supercontig | An11:2058587..2060107 - |
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