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Sequences
The following sequences are available for this feature:
mRNA from alignment at An11:2156145..2156925- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_007212-T1 ID=CBS51388_007212-T1|Name=CBS51388_007212-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=781bp|location=Sequence derived from alignment at An11:2156145..2156925- (Aspergillus niger CBS 513.88)
ATGGCTGTCAGGAACTCCAGTGCGTCGTCCTGTTCTGTCGATTTTTCTCG
AAGTCGCCAATCCAATCCATACTAATTTGACTTCGTGATGATTTCAGGTC
TCGCCTCTTCTCGCCGCAAGTCGCGCGCCGCCCACTTCAACGCCCCCTCC
AGCGAGCGCCGCGTTATCCTCTCTGCTCCTCTCTCGAGCGAGCTCCGCGC
CAAGTACAATGTACGTTCGATCAGACCGATGTGATTCTTGTTTTTGCAGC
CCCTGGGATGTGTGTGTTTTTGGAGATGGATTTGGCATGGTTTCTTTCTT
TCCGGTCGGGGACAGGCTGGATCAGGCCAGCGAGATTGGGATTTGGGAGG
AAGATGCAAGAACCAGATCCAATCGACAAACATCCAATCCGAGATATCAG
GCACAACGAAACAATACTGGGAGAAATGGTTCTAACGCAGTCGTTTGATA
GGTCCGCTCCATGCCCATCCGCAAGGACGACGAGGTGAGCCAAGGCTGAT
TCTAACCCGACATCTAACCCACTCGCTAAACTGAGAACAAGGTCATGGTC
GTCCGTGGCAGCAACAAGGGCCGTGAGGGCAAGGTCACCAGCGTCTACCG
CCTGAAGTGGGCCATCCACGTCGAGCGCATCAGCCGCGACAAGAGCAACG
GCCAGAGCGTCCCCATCCCCCTCCACCCCTCCAACGTCGTCATCAAGAAG
CTCCACCTCGACAAGGACCGTGAGGCCATCCTTGAGCGTGTTGGCAAGGG
TCGTGAGGCCGTCAAGGCCAAGTCCGCTTAA back to topCoding sequence (CDS) from alignment at An11:2156145..2156925- >CBS51388_007212-T1 ID=CBS51388_007212-T1|Name=CBS51388_007212-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1620bp|location=Sequence derived from alignment at An11:2156145..2156925- (Aspergillus niger CBS 513.88)
GTCATGGTCGTCCGTGGCAGCAACAAGGGCCGTGAGGGCAAGGTCACCAG
CGTCTACCGCCTGAAGTGGGCCATCCACGTCGAGCGCATCAGCCGCGACA
AGAGCAACGGCCAGAGCGTCCCCATCCCCCTCCACCCCTCCAACGTCGTC
ATCAAGAAGCTCCACCTCGACAAGGACCGTGAGGCCATCCTTGAGCGTGT
TGGCAAGGGTCGTGAGGCCGTCAAGGCCAAGTCCGCTTAAGTCCGCTCCA
TGCCCATCCGCAAGGACGACGAGGTCTCGCCTCTTCTCGCCGCAAGTCGC
GCGCCGCCCACTTCAACGCCCCCTCCAGCGAGCGCCGCGTTATCCTCTCT
GCTCCTCTCTCGAGCGAGCTCCGCGCCAAGTACAATATGGCTGTCAGGAA
CTCCAGTCATGGTCGTCCGTGGCAGCAACAAGGGCCGTGAGGGCAAGGTC
ACCAGCGTCTACCGCCTGAAGTGGGCCATCCACGTCGAGCGCATCAGCCG
CGACAAGAGCAACGGCCAGAGCGTCCCCATCCCCCTCCACCCCTCCAACG
TCGTCATCAAGAAGCTCCACCTCGACAAGGACCGTGAGGCCATCCTTGAG
CGTGTTGGCAAGGGTCGTGAGGCCGTCAAGGCCAAGTCCGCTTAAGTCCG
CTCCATGCCCATCCGCAAGGACGACGAGGTCTCGCCTCTTCTCGCCGCAA
GTCGCGCGCCGCCCACTTCAACGCCCCCTCCAGCGAGCGCCGCGTTATCC
TCTCTGCTCCTCTCTCGAGCGAGCTCCGCGCCAAGTACAATATGGCTGTC
AGGAACTCCAGTCATGGTCGTCCGTGGCAGCAACAAGGGCCGTGAGGGCA
AGGTCACCAGCGTCTACCGCCTGAAGTGGGCCATCCACGTCGAGCGCATC
AGCCGCGACAAGAGCAACGGCCAGAGCGTCCCCATCCCCCTCCACCCCTC
CAACGTCGTCATCAAGAAGCTCCACCTCGACAAGGACCGTGAGGCCATCC
TTGAGCGTGTTGGCAAGGGTCGTGAGGCCGTCAAGGCCAAGTCCGCTTAA
GTCCGCTCCATGCCCATCCGCAAGGACGACGAGGTCTCGCCTCTTCTCGC
CGCAAGTCGCGCGCCGCCCACTTCAACGCCCCCTCCAGCGAGCGCCGCGT
TATCCTCTCTGCTCCTCTCTCGAGCGAGCTCCGCGCCAAGTACAATATGG
CTGTCAGGAACTCCAGTCATGGTCGTCCGTGGCAGCAACAAGGGCCGTGA
GGGCAAGGTCACCAGCGTCTACCGCCTGAAGTGGGCCATCCACGTCGAGC
GCATCAGCCGCGACAAGAGCAACGGCCAGAGCGTCCCCATCCCCCTCCAC
CCCTCCAACGTCGTCATCAAGAAGCTCCACCTCGACAAGGACCGTGAGGC
CATCCTTGAGCGTGTTGGCAAGGGTCGTGAGGCCGTCAAGGCCAAGTCCG
CTTAAGTCCGCTCCATGCCCATCCGCAAGGACGACGAGGTCTCGCCTCTT
CTCGCCGCAAGTCGCGCGCCGCCCACTTCAACGCCCCCTCCAGCGAGCGC
CGCGTTATCCTCTCTGCTCCTCTCTCGAGCGAGCTCCGCGCCAAGTACAA
TATGGCTGTCAGGAACTCCA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005840 | ribosome |
| GO:0015934 | large ribosomal subunit |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006412 | translation |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003735 | structural constituent of ribosome |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09265DAV |
| DBxref | InterPro:IPR008991 |
| DBxref | InterPro:IPR041988 |
| DBxref | InterPro:IPR005825 |
| DBxref | InterPro:IPR014722 |
| DBxref | InterPro:IPR005756 |
| DBxref | InterPro:IPR005824 |
| DBxref | PFAM:PF16906 |
| DBxref | PFAM:PF00467 |
| Product | 60S ribosomal protein L26A |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An11 | supercontig | An11:2156145..2156925 - |
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