You are here

Home

CBS51388_007223-T1, CBS51388_007223-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_007223-T1
Unique NameCBS51388_007223-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An11:2183179..2184738-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_007223-T1 ID=CBS51388_007223-T1|Name=CBS51388_007223-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1560bp|location=Sequence derived from alignment at An11:2183179..2184738- (Aspergillus niger CBS 513.88)
ATGAGCTGGTCTTCCCAAGCCTACGGTCCAGATGGCCCGTGGCAGGCCGT
ATCCATCGACGTGGGCAGCAACCAGCAGACGGTCGATCTTTACCCCGGAG
CCAACTATGCTAGCACGATCCTGATGAGCACTCTCTGCACGAACAAAACC
CTGTCATCCACCTGCTACGCTGCCGAAGCAGGCACGTTCAACCAAAACAC
CTCCACCACTGCCTACACCACCGCCAGCTCGTGGGAAACAACTTACTGGG
CCGTCGAGGGTGGAAGCCAAGAGGCTGTGCTCGGCGATGAGGTCACCTTA
GGGTCGTTTGTCGTCCCCAATGTGAGCTTCGAAGCCATCTACCAGACCTA
CCAGACCTATCCCAATGGCATCGCCTATCCTGTCTCGGTCGGCAGTCTGG
CCCTGGGGGGTCCGTACTTGTCGGATACCGTCTCCAATTCGACGGTCCTG
AACATGATCGCAGGATGGCTTTACTCGTCCAACGACATTCCGTCCTACTC
GTACGGCATGCATATCGGGTCGGTAGACCCCAAAATCCCAGGCTCCCTGA
TCTTGGGGGGCTACGATAAGAGCCGAGTGATCGGAGACGTGAGTGCGCAG
GGAGTAGTGTCTTCGAGTGGTCTTTTGGAACTTGAATTAAAGGATATTGG
GCTGGGTGTTGCGGCGGGTTCCTCTCCCTTCAGCTTCAACAACGAAAGTG
GCTTGTTTCTCCAAAGCAGTGGTTCGGTTCAGGCCAAGACCGTCCAGATT
GATCCAACCAAGCCCTACATGTACCTTCCCCAGGCGACATGCGATGCCAT
CACCTCCACCATGCCGATCTCCTTCAATTCCAGCTTGGGGCTATACTTCT
GGGACACCACGAGCGATGATTATCTGAATATCACGTCTTCCGCCGCATAC
CTCTCCTTTGTGTTCAACATGAATGGGGTCAACAACAAGAACATTACCAT
CAAGATTCCCTTTTCCCAGCTCAATCTTACGCTGCAAGAACCGCTGGTCG
ATCAAAACGTCACCTACTTCCCGTGCTTCCTCACTACCTCCACCCCGGTG
CTCGGTCGAGCCTTTCTCCAGTCCGCATTCGTTGGGGTGAACTGGTTCAA
CGGGAACAACTCGGGCACATGGTTTCTGGCACAGGCCCCCGGCCCGGGTT
ACGCCAGTGAAGACATCACCCGGATCGCAGTGAGTGACACGTCGCTTTCT
GCCTCTAACGGTACCTGGGAAGAGACCTGGGCTACGTACTGGGGCATCAA
AACATCCGACAACTCGAGCAGCTCCAAGAGTGGCCTGTCTTCCGGTGCCA
AAATTGGAATTGGCGTCGGGGTGGGTGTCGGTGGAGCAGTGTTGATCGCA
GCAGGTATAGCCATTGCATTCTGTCTTCGCCGTCGCCGCGGGGCGAGTCA
AGAGGCGGCTGGAGAGCAACGGAGGTCGATGTTTAGGGGCTTTGCGGAGC
TACCGGGAGGTGCTCACAGTGAACCGGCGAAGGAGTTGGATACGAAGATG
CATAAGCCGCCGCAGGAAATGATGGCTTCGCAGGAGGTAGAGCGATACGA
GCTGGGGTGA
back to top

Coding sequence (CDS) from alignment at An11:2183179..2184738-

>CBS51388_007223-T1 ID=CBS51388_007223-T1|Name=CBS51388_007223-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1560bp|location=Sequence derived from alignment at An11:2183179..2184738- (Aspergillus niger CBS 513.88)
ATGAGCTGGTCTTCCCAAGCCTACGGTCCAGATGGCCCGTGGCAGGCCGT
ATCCATCGACGTGGGCAGCAACCAGCAGACGGTCGATCTTTACCCCGGAG
CCAACTATGCTAGCACGATCCTGATGAGCACTCTCTGCACGAACAAAACC
CTGTCATCCACCTGCTACGCTGCCGAAGCAGGCACGTTCAACCAAAACAC
CTCCACCACTGCCTACACCACCGCCAGCTCGTGGGAAACAACTTACTGGG
CCGTCGAGGGTGGAAGCCAAGAGGCTGTGCTCGGCGATGAGGTCACCTTA
GGGTCGTTTGTCGTCCCCAATGTGAGCTTCGAAGCCATCTACCAGACCTA
CCAGACCTATCCCAATGGCATCGCCTATCCTGTCTCGGTCGGCAGTCTGG
CCCTGGGGGGTCCGTACTTGTCGGATACCGTCTCCAATTCGACGGTCCTG
AACATGATCGCAGGATGGCTTTACTCGTCCAACGACATTCCGTCCTACTC
GTACGGCATGCATATCGGGTCGGTAGACCCCAAAATCCCAGGCTCCCTGA
TCTTGGGGGGCTACGATAAGAGCCGAGTGATCGGAGACGTGAGTGCGCAG
GGAGTAGTGTCTTCGAGTGGTCTTTTGGAACTTGAATTAAAGGATATTGG
GCTGGGTGTTGCGGCGGGTTCCTCTCCCTTCAGCTTCAACAACGAAAGTG
GCTTGTTTCTCCAAAGCAGTGGTTCGGTTCAGGCCAAGACCGTCCAGATT
GATCCAACCAAGCCCTACATGTACCTTCCCCAGGCGACATGCGATGCCAT
CACCTCCACCATGCCGATCTCCTTCAATTCCAGCTTGGGGCTATACTTCT
GGGACACCACGAGCGATGATTATCTGAATATCACGTCTTCCGCCGCATAC
CTCTCCTTTGTGTTCAACATGAATGGGGTCAACAACAAGAACATTACCAT
CAAGATTCCCTTTTCCCAGCTCAATCTTACGCTGCAAGAACCGCTGGTCG
ATCAAAACGTCACCTACTTCCCGTGCTTCCTCACTACCTCCACCCCGGTG
CTCGGTCGAGCCTTTCTCCAGTCCGCATTCGTTGGGGTGAACTGGTTCAA
CGGGAACAACTCGGGCACATGGTTTCTGGCACAGGCCCCCGGCCCGGGTT
ACGCCAGTGAAGACATCACCCGGATCGCAGTGAGTGACACGTCGCTTTCT
GCCTCTAACGGTACCTGGGAAGAGACCTGGGCTACGTACTGGGGCATCAA
AACATCCGACAACTCGAGCAGCTCCAAGAGTGGCCTGTCTTCCGGTGCCA
AAATTGGAATTGGCGTCGGGGTGGGTGTCGGTGGAGCAGTGTTGATCGCA
GCAGGTATAGCCATTGCATTCTGTCTTCGCCGTCGCCGCGGGGCGAGTCA
AGAGGCGGCTGGAGAGCAACGGAGGTCGATGTTTAGGGGCTTTGCGGAGC
TACCGGGAGGTGCTCACAGTGAACCGGCGAAGGAGTTGGATACGAAGATG
CATAAGCCGCCGCAGGAAATGATGGCTTCGCAGGAGGTAGAGCGATACGA
GCTGGGGTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_007223CBS51388_007223Aspergillus niger CBS 513.88gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007223-T1.cdsCBS51388_007223-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007223-T1.exon1CBS51388_007223-T1.exon1Aspergillus niger CBS 513.88exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007223-T1CBS51388_007223-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR033121
DBxrefInterPro:IPR021109
DBxrefPFAM:PF00026
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An11supercontigAn11:2183179..2184738 -
Powered by Drupal