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CBS51388_007231-T1, CBS51388_007231-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_007231-T1
Unique NameCBS51388_007231-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An11:2212713..2213985+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_007231-T1 ID=CBS51388_007231-T1|Name=CBS51388_007231-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1273bp|location=Sequence derived from alignment at An11:2212713..2213985+ (Aspergillus niger CBS 513.88)
ATGTCCTCTGCCAATTACGTATGCGCCCTGACATGCCGTGTGTGCCGCGT
GGTTGCCTGGTTTTAACGGGAAGCAGATGTCTCCCTCTTCCTCGACGACG
CCAACATGGCATCAGTTCGAACGGAAGGTTGAGGAGGTGAAACCATCCAA
AACGTGAGTGATTTACCCCACCTTTCCGTTGCGCGCCACGATTGCATGAT
GTACCTTGAAATCAAGTTGGGAATCTCTCTGAAAAACAACTGAGGAGAAT
ATATTAACTTGTGTTTCTGAACCCTTCGTTTGATTTTGCCTTATCATCAT
CAAGTTTACCGGTTGGTCTGCAGCTGCTAACTGTTCTCTTGAAGTGATAT
CAATTATCTAGTCATGGATTACCTCATCACCAATGGCTACCCAGCTGCTG
CGAAGAAATTCTCAGTAGAGGCCAACATCCAACCCAGGGCAGATATCGAG
TCGATTCAAGAAAGAGTTGACATTCGAACTGCGATCCATTCTGGGAATAT
TCAGGTCGCCATTGAGAAGATCAATGAGCTCAACCCACAGGTAAGACACC
TCTTCTATCTCATCCCCTACCCACCACCCTCGTTGCAAGGATTATACGAC
GTTTCATGCACCACTCAGAACATCCCTTTTGGGGTTTGTTGATAAACAAA
CATCTTCAGTCCTCAGTATGAGCAGCAAGAATAAAACATGCCGTTACTTG
TCATCACGCCTATTTCATAGCCTTTTGCTGACTTGACCGGCTTAGATCCT
AGATGAAAATGCTCCTTTACATTTCGCATTGCTGCGACTGCAGCTGGTGG
AGTTGATTCGCTCGTGCATCTCTTCCCCCGATGGCGACGTCAGCCCTGCC
CTTGAGTTTGCGAGCTCGCAACTTGCACCGCGGGCACCCACCAACCCCCA
GTTCCTTGAGGACCTTGAGAGGACTCTTGCTCTCTTAATATTCCCGGCGG
ATAGCCTGTCCCCGCCACTTGCCCCTTTACTACACCCCGACCTTCGTAAG
GATATTGCCAACCGCGTCAACGAAGCCATTCTGTTGAATCAAGGCGCTCG
TAAAGAGGCCCGGCTACGCAACTTAGTTAAACTGCGCGCGTGGGCTGAAC
AGAAAGCCCGGGAGGCTAAGAAGGATATACCCGAGAAGCTGGACCTTGGA
CTGGGCGATAATCCCAACACCCACAACAGTAATCCCCTGGCCAGTTCGAC
CAGTGCCAGTCACAATGGCTCTAACGACACCGTAATGACCAATAATGGGG
ATATCGACCCCATGATCTCATAA
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Coding sequence (CDS) from alignment at An11:2212713..2213985+

>CBS51388_007231-T1 ID=CBS51388_007231-T1|Name=CBS51388_007231-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3276bp|location=Sequence derived from alignment at An11:2212713..2213985+ (Aspergillus niger CBS 513.88)
ATGTCCTCTGCCAATTACATGTCTCCCTCTTCCTCGACGACGCCAACATG
GCATCAGTTCGAACGGAAGGTTGAGGAGGTGAAACCATCCAAAACTGATA
TCAATTATCTAGTCATGGATTACCTCATCACCAATGGCTACCCAGCTGCT
GCGAAGAAATTCTCAGTAGAGGCCAACATCCAACCCAGGGCAGATATCGA
GTCGATTCAAGAAAGAGTTGACATTCGAACTGCGATCCATTCTGGGAATA
TTCAGGTCGCCATTGAGAAGATCAATGAGCTCAACCCACAGATCCTAGAT
GAAAATGCTCCTTTACATTTCGCATTGCTGCGACTGCAGCTGGTGGAGTT
GATTCGCTCGTGCATCTCTTCCCCCGATGGCGACGTCAGCCCTGCCCTTG
AGTTTGCGAGCTCGCAACTTGCACCGCGGGCACCCACCAACCCCCAGTTC
CTTGAGGACCTTGAGAGGACTCTTGCTCTCTTAATATTCCCGGCGGATAG
CCTGTCCCCGCCACTTGCCCCTTTACTACACCCCGACCTTCGTAAGGATA
TTGCCAACCGCGTCAACGAAGCCATTCTGTTGAATCAAGGCGCTCGTAAA
GAGGCCCGGCTACGCAACTTAGTTAAACTGCGCGCGTGGGCTGAACAGAA
AGCCCGGGAGGCTAAGAAGGATATACCCGAGAAGCTGGACCTTGGACTGG
GCGATAATCCCAACACCCACAACAGTAATCCCCTGGCCAGTTCGACCAGT
GCCAGTCACAATGGCTCTAACGACACCGTAATGACCAATAATGGGGATAT
CGACCCCATGATCTCATAAATGTCCTCTGCCAATTACATGTCTCCCTCTT
CCTCGACGACGCCAACATGGCATCAGTTCGAACGGAAGGTTGAGGAGGTG
AAACCATCCAAAACTGATATCAATTATCTAGTCATGGATTACCTCATCAC
CAATGGCTACCCAGCTGCTGCGAAGAAATTCTCAGTAGAGGCCAACATCC
AACCCAGGGCAGATATCGAGTCGATTCAAGAAAGAGTTGACATTCGAACT
GCGATCCATTCTGGGAATATTCAGGTCGCCATTGAGAAGATCAATGAGCT
CAACCCACAGATCCTAGATGAAAATGCTCCTTTACATTTCGCATTGCTGC
GACTGCAGCTGGTGGAGTTGATTCGCTCGTGCATCTCTTCCCCCGATGGC
GACGTCAGCCCTGCCCTTGAGTTTGCGAGCTCGCAACTTGCACCGCGGGC
ACCCACCAACCCCCAGTTCCTTGAGGACCTTGAGAGGACTCTTGCTCTCT
TAATATTCCCGGCGGATAGCCTGTCCCCGCCACTTGCCCCTTTACTACAC
CCCGACCTTCGTAAGGATATTGCCAACCGCGTCAACGAAGCCATTCTGTT
GAATCAAGGCGCTCGTAAAGAGGCCCGGCTACGCAACTTAGTTAAACTGC
GCGCGTGGGCTGAACAGAAAGCCCGGGAGGCTAAGAAGGATATACCCGAG
AAGCTGGACCTTGGACTGGGCGATAATCCCAACACCCACAACAGTAATCC
CCTGGCCAGTTCGACCAGTGCCAGTCACAATGGCTCTAACGACACCGTAA
TGACCAATAATGGGGATATCGACCCCATGATCTCATAAATGTCCTCTGCC
AATTACATGTCTCCCTCTTCCTCGACGACGCCAACATGGCATCAGTTCGA
ACGGAAGGTTGAGGAGGTGAAACCATCCAAAACTGATATCAATTATCTAG
TCATGGATTACCTCATCACCAATGGCTACCCAGCTGCTGCGAAGAAATTC
TCAGTAGAGGCCAACATCCAACCCAGGGCAGATATCGAGTCGATTCAAGA
AAGAGTTGACATTCGAACTGCGATCCATTCTGGGAATATTCAGGTCGCCA
TTGAGAAGATCAATGAGCTCAACCCACAGATCCTAGATGAAAATGCTCCT
TTACATTTCGCATTGCTGCGACTGCAGCTGGTGGAGTTGATTCGCTCGTG
CATCTCTTCCCCCGATGGCGACGTCAGCCCTGCCCTTGAGTTTGCGAGCT
CGCAACTTGCACCGCGGGCACCCACCAACCCCCAGTTCCTTGAGGACCTT
GAGAGGACTCTTGCTCTCTTAATATTCCCGGCGGATAGCCTGTCCCCGCC
ACTTGCCCCTTTACTACACCCCGACCTTCGTAAGGATATTGCCAACCGCG
TCAACGAAGCCATTCTGTTGAATCAAGGCGCTCGTAAAGAGGCCCGGCTA
CGCAACTTAGTTAAACTGCGCGCGTGGGCTGAACAGAAAGCCCGGGAGGC
TAAGAAGGATATACCCGAGAAGCTGGACCTTGGACTGGGCGATAATCCCA
ACACCCACAACAGTAATCCCCTGGCCAGTTCGACCAGTGCCAGTCACAAT
GGCTCTAACGACACCGTAATGACCAATAATGGGGATATCGACCCCATGAT
CTCATAAATGTCCTCTGCCAATTACATGTCTCCCTCTTCCTCGACGACGC
CAACATGGCATCAGTTCGAACGGAAGGTTGAGGAGGTGAAACCATCCAAA
ACTGATATCAATTATCTAGTCATGGATTACCTCATCACCAATGGCTACCC
AGCTGCTGCGAAGAAATTCTCAGTAGAGGCCAACATCCAACCCAGGGCAG
ATATCGAGTCGATTCAAGAAAGAGTTGACATTCGAACTGCGATCCATTCT
GGGAATATTCAGGTCGCCATTGAGAAGATCAATGAGCTCAACCCACAGAT
CCTAGATGAAAATGCTCCTTTACATTTCGCATTGCTGCGACTGCAGCTGG
TGGAGTTGATTCGCTCGTGCATCTCTTCCCCCGATGGCGACGTCAGCCCT
GCCCTTGAGTTTGCGAGCTCGCAACTTGCACCGCGGGCACCCACCAACCC
CCAGTTCCTTGAGGACCTTGAGAGGACTCTTGCTCTCTTAATATTCCCGG
CGGATAGCCTGTCCCCGCCACTTGCCCCTTTACTACACCCCGACCTTCGT
AAGGATATTGCCAACCGCGTCAACGAAGCCATTCTGTTGAATCAAGGCGC
TCGTAAAGAGGCCCGGCTACGCAACTTAGTTAAACTGCGCGCGTGGGCTG
AACAGAAAGCCCGGGAGGCTAAGAAGGATATACCCGAGAAGCTGGACCTT
GGACTGGGCGATAATCCCAACACCCACAACAGTAATCCCCTGGCCAGTTC
GACCAGTGCCAGTCACAATGGCTCTAACGACACCGTAATGACCAATAATG
GGGATATCGACCCCATGATCTCATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_007231CBS51388_007231Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007231-T1.exon1CBS51388_007231-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_007231-T1.exon2CBS51388_007231-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_007231-T1.exon3CBS51388_007231-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_007231-T1.exon4CBS51388_007231-T1.exon4Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007231-T1.cdsCBS51388_007231-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007231-T1CBS51388_007231-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09264JK1
DBxrefInterPro:IPR024964
DBxrefInterPro:IPR006595
DBxrefInterPro:IPR006594
DBxrefInterPro:IPR013144
DBxrefPFAM:PF08513
DBxrefPFAM:PF10607
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An11supercontigAn11:2212713..2213985 +
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