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Sequences
The following sequences are available for this feature:
mRNA from alignment at An11:2212713..2213985+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_007231-T1 ID=CBS51388_007231-T1|Name=CBS51388_007231-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1273bp|location=Sequence derived from alignment at An11:2212713..2213985+ (Aspergillus niger CBS 513.88) ATGTCCTCTGCCAATTACGTATGCGCCCTGACATGCCGTGTGTGCCGCGT
GGTTGCCTGGTTTTAACGGGAAGCAGATGTCTCCCTCTTCCTCGACGACG
CCAACATGGCATCAGTTCGAACGGAAGGTTGAGGAGGTGAAACCATCCAA
AACGTGAGTGATTTACCCCACCTTTCCGTTGCGCGCCACGATTGCATGAT
GTACCTTGAAATCAAGTTGGGAATCTCTCTGAAAAACAACTGAGGAGAAT
ATATTAACTTGTGTTTCTGAACCCTTCGTTTGATTTTGCCTTATCATCAT
CAAGTTTACCGGTTGGTCTGCAGCTGCTAACTGTTCTCTTGAAGTGATAT
CAATTATCTAGTCATGGATTACCTCATCACCAATGGCTACCCAGCTGCTG
CGAAGAAATTCTCAGTAGAGGCCAACATCCAACCCAGGGCAGATATCGAG
TCGATTCAAGAAAGAGTTGACATTCGAACTGCGATCCATTCTGGGAATAT
TCAGGTCGCCATTGAGAAGATCAATGAGCTCAACCCACAGGTAAGACACC
TCTTCTATCTCATCCCCTACCCACCACCCTCGTTGCAAGGATTATACGAC
GTTTCATGCACCACTCAGAACATCCCTTTTGGGGTTTGTTGATAAACAAA
CATCTTCAGTCCTCAGTATGAGCAGCAAGAATAAAACATGCCGTTACTTG
TCATCACGCCTATTTCATAGCCTTTTGCTGACTTGACCGGCTTAGATCCT
AGATGAAAATGCTCCTTTACATTTCGCATTGCTGCGACTGCAGCTGGTGG
AGTTGATTCGCTCGTGCATCTCTTCCCCCGATGGCGACGTCAGCCCTGCC
CTTGAGTTTGCGAGCTCGCAACTTGCACCGCGGGCACCCACCAACCCCCA
GTTCCTTGAGGACCTTGAGAGGACTCTTGCTCTCTTAATATTCCCGGCGG
ATAGCCTGTCCCCGCCACTTGCCCCTTTACTACACCCCGACCTTCGTAAG
GATATTGCCAACCGCGTCAACGAAGCCATTCTGTTGAATCAAGGCGCTCG
TAAAGAGGCCCGGCTACGCAACTTAGTTAAACTGCGCGCGTGGGCTGAAC
AGAAAGCCCGGGAGGCTAAGAAGGATATACCCGAGAAGCTGGACCTTGGA
CTGGGCGATAATCCCAACACCCACAACAGTAATCCCCTGGCCAGTTCGAC
CAGTGCCAGTCACAATGGCTCTAACGACACCGTAATGACCAATAATGGGG
ATATCGACCCCATGATCTCATAA back to topCoding sequence (CDS) from alignment at An11:2212713..2213985+ >CBS51388_007231-T1 ID=CBS51388_007231-T1|Name=CBS51388_007231-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3276bp|location=Sequence derived from alignment at An11:2212713..2213985+ (Aspergillus niger CBS 513.88) ATGTCCTCTGCCAATTACATGTCTCCCTCTTCCTCGACGACGCCAACATG GCATCAGTTCGAACGGAAGGTTGAGGAGGTGAAACCATCCAAAACTGATA TCAATTATCTAGTCATGGATTACCTCATCACCAATGGCTACCCAGCTGCT GCGAAGAAATTCTCAGTAGAGGCCAACATCCAACCCAGGGCAGATATCGA GTCGATTCAAGAAAGAGTTGACATTCGAACTGCGATCCATTCTGGGAATA TTCAGGTCGCCATTGAGAAGATCAATGAGCTCAACCCACAGATCCTAGAT GAAAATGCTCCTTTACATTTCGCATTGCTGCGACTGCAGCTGGTGGAGTT GATTCGCTCGTGCATCTCTTCCCCCGATGGCGACGTCAGCCCTGCCCTTG AGTTTGCGAGCTCGCAACTTGCACCGCGGGCACCCACCAACCCCCAGTTC CTTGAGGACCTTGAGAGGACTCTTGCTCTCTTAATATTCCCGGCGGATAG CCTGTCCCCGCCACTTGCCCCTTTACTACACCCCGACCTTCGTAAGGATA TTGCCAACCGCGTCAACGAAGCCATTCTGTTGAATCAAGGCGCTCGTAAA GAGGCCCGGCTACGCAACTTAGTTAAACTGCGCGCGTGGGCTGAACAGAA AGCCCGGGAGGCTAAGAAGGATATACCCGAGAAGCTGGACCTTGGACTGG GCGATAATCCCAACACCCACAACAGTAATCCCCTGGCCAGTTCGACCAGT GCCAGTCACAATGGCTCTAACGACACCGTAATGACCAATAATGGGGATAT CGACCCCATGATCTCATAAATGTCCTCTGCCAATTACATGTCTCCCTCTT CCTCGACGACGCCAACATGGCATCAGTTCGAACGGAAGGTTGAGGAGGTG AAACCATCCAAAACTGATATCAATTATCTAGTCATGGATTACCTCATCAC CAATGGCTACCCAGCTGCTGCGAAGAAATTCTCAGTAGAGGCCAACATCC AACCCAGGGCAGATATCGAGTCGATTCAAGAAAGAGTTGACATTCGAACT GCGATCCATTCTGGGAATATTCAGGTCGCCATTGAGAAGATCAATGAGCT CAACCCACAGATCCTAGATGAAAATGCTCCTTTACATTTCGCATTGCTGC GACTGCAGCTGGTGGAGTTGATTCGCTCGTGCATCTCTTCCCCCGATGGC GACGTCAGCCCTGCCCTTGAGTTTGCGAGCTCGCAACTTGCACCGCGGGC ACCCACCAACCCCCAGTTCCTTGAGGACCTTGAGAGGACTCTTGCTCTCT TAATATTCCCGGCGGATAGCCTGTCCCCGCCACTTGCCCCTTTACTACAC CCCGACCTTCGTAAGGATATTGCCAACCGCGTCAACGAAGCCATTCTGTT GAATCAAGGCGCTCGTAAAGAGGCCCGGCTACGCAACTTAGTTAAACTGC GCGCGTGGGCTGAACAGAAAGCCCGGGAGGCTAAGAAGGATATACCCGAG AAGCTGGACCTTGGACTGGGCGATAATCCCAACACCCACAACAGTAATCC CCTGGCCAGTTCGACCAGTGCCAGTCACAATGGCTCTAACGACACCGTAA TGACCAATAATGGGGATATCGACCCCATGATCTCATAAATGTCCTCTGCC AATTACATGTCTCCCTCTTCCTCGACGACGCCAACATGGCATCAGTTCGA ACGGAAGGTTGAGGAGGTGAAACCATCCAAAACTGATATCAATTATCTAG TCATGGATTACCTCATCACCAATGGCTACCCAGCTGCTGCGAAGAAATTC TCAGTAGAGGCCAACATCCAACCCAGGGCAGATATCGAGTCGATTCAAGA AAGAGTTGACATTCGAACTGCGATCCATTCTGGGAATATTCAGGTCGCCA TTGAGAAGATCAATGAGCTCAACCCACAGATCCTAGATGAAAATGCTCCT TTACATTTCGCATTGCTGCGACTGCAGCTGGTGGAGTTGATTCGCTCGTG CATCTCTTCCCCCGATGGCGACGTCAGCCCTGCCCTTGAGTTTGCGAGCT CGCAACTTGCACCGCGGGCACCCACCAACCCCCAGTTCCTTGAGGACCTT GAGAGGACTCTTGCTCTCTTAATATTCCCGGCGGATAGCCTGTCCCCGCC ACTTGCCCCTTTACTACACCCCGACCTTCGTAAGGATATTGCCAACCGCG TCAACGAAGCCATTCTGTTGAATCAAGGCGCTCGTAAAGAGGCCCGGCTA CGCAACTTAGTTAAACTGCGCGCGTGGGCTGAACAGAAAGCCCGGGAGGC TAAGAAGGATATACCCGAGAAGCTGGACCTTGGACTGGGCGATAATCCCA ACACCCACAACAGTAATCCCCTGGCCAGTTCGACCAGTGCCAGTCACAAT GGCTCTAACGACACCGTAATGACCAATAATGGGGATATCGACCCCATGAT CTCATAAATGTCCTCTGCCAATTACATGTCTCCCTCTTCCTCGACGACGC CAACATGGCATCAGTTCGAACGGAAGGTTGAGGAGGTGAAACCATCCAAA ACTGATATCAATTATCTAGTCATGGATTACCTCATCACCAATGGCTACCC AGCTGCTGCGAAGAAATTCTCAGTAGAGGCCAACATCCAACCCAGGGCAG ATATCGAGTCGATTCAAGAAAGAGTTGACATTCGAACTGCGATCCATTCT GGGAATATTCAGGTCGCCATTGAGAAGATCAATGAGCTCAACCCACAGAT CCTAGATGAAAATGCTCCTTTACATTTCGCATTGCTGCGACTGCAGCTGG TGGAGTTGATTCGCTCGTGCATCTCTTCCCCCGATGGCGACGTCAGCCCT GCCCTTGAGTTTGCGAGCTCGCAACTTGCACCGCGGGCACCCACCAACCC CCAGTTCCTTGAGGACCTTGAGAGGACTCTTGCTCTCTTAATATTCCCGG CGGATAGCCTGTCCCCGCCACTTGCCCCTTTACTACACCCCGACCTTCGT AAGGATATTGCCAACCGCGTCAACGAAGCCATTCTGTTGAATCAAGGCGC TCGTAAAGAGGCCCGGCTACGCAACTTAGTTAAACTGCGCGCGTGGGCTG AACAGAAAGCCCGGGAGGCTAAGAAGGATATACCCGAGAAGCTGGACCTT GGACTGGGCGATAATCCCAACACCCACAACAGTAATCCCCTGGCCAGTTC GACCAGTGCCAGTCACAATGGCTCTAACGACACCGTAATGACCAATAATG GGGATATCGACCCCATGATCTCATAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
Term | Definition |
GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
Property Name | Value |
Note | BUSCO:EOG09264JK1 |
DBxref | InterPro:IPR024964 |
DBxref | InterPro:IPR006595 |
DBxref | InterPro:IPR006594 |
DBxref | InterPro:IPR013144 |
DBxref | PFAM:PF08513 |
DBxref | PFAM:PF10607 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
An11 | supercontig | An11:2212713..2213985 + |
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