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Sequences
The following sequences are available for this feature:
mRNA from alignment at An11:2228281..2228795+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_007234-T1 ID=CBS51388_007234-T1|Name=CBS51388_007234-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=515bp|location=Sequence derived from alignment at An11:2228281..2228795+ (Aspergillus niger CBS 513.88)
ATGTCTGCGATTGGAACCCTCGTCTTCTGCACTGACTGCGGCTCCCTGTT
GGATGGCTCAATTGGAGATCCCACCAAGATTCTTGTCTGCGATGTCTGCG
GAGCTAGGAATAAAGGTAGGTTTGCCTTGTTGGTATCTTAGGTTGCAAAG
TTGCATTCACTGACCTTGTCCCCCTTTAACTTCCTATACAGACACCGTTC
CCCAGACTATTGTCTCCGAGTCCAAGCCGAGCGCATTCCCGTCTGCCTTG
AGAGCGAAAAGATCTGCGGTCCAGACCTTGACGGCGTCCGACAGAAGAAC
CGAAGCCCTTACCCAACATACTTGCATCAAATGTGGAAGGAAAGAGATGT
ACTACACCACCGTACAACTGCGCAGTGCAGATGAAGGTAGTACGGTGTTT
TACACGTGTGTCTGTGGTCACAAGTATGCAACCTACAAACCCCTCTCTTT
CCCTGCCTTTTCCGCAATAGCCCATACTAATCTTTCTTTTACACAGGGAA
TCGACGAACAACTAA back to topCoding sequence (CDS) from alignment at An11:2228281..2228795+ >CBS51388_007234-T1 ID=CBS51388_007234-T1|Name=CBS51388_007234-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1098bp|location=Sequence derived from alignment at An11:2228281..2228795+ (Aspergillus niger CBS 513.88)
ATGTCTGCGATTGGAACCCTCGTCTTCTGCACTGACTGCGGCTCCCTGTT
GGATGGCTCAATTGGAGATCCCACCAAGATTCTTGTCTGCGATGTCTGCG
GAGCTAGGAATAAAGACACCGTTCCCCAGACTATTGTCTCCGAGTCCAAG
CCGAGCGCATTCCCGTCTGCCTTGAGAGCGAAAAGATCTGCGGTCCAGAC
CTTGACGGCGTCCGACAGAAGAACCGAAGCCCTTACCCAACATACTTGCA
TCAAATGTGGAAGGAAAGAGATGTACTACACCACCGTACAACTGCGCAGT
GCAGATGAAGGTAGTACGGTGTTTTACACGTGTGTCTGTGGTCACAAGGA
ATCGACGAACAACTAAATGTCTGCGATTGGAACCCTCGTCTTCTGCACTG
ACTGCGGCTCCCTGTTGGATGGCTCAATTGGAGATCCCACCAAGATTCTT
GTCTGCGATGTCTGCGGAGCTAGGAATAAAGACACCGTTCCCCAGACTAT
TGTCTCCGAGTCCAAGCCGAGCGCATTCCCGTCTGCCTTGAGAGCGAAAA
GATCTGCGGTCCAGACCTTGACGGCGTCCGACAGAAGAACCGAAGCCCTT
ACCCAACATACTTGCATCAAATGTGGAAGGAAAGAGATGTACTACACCAC
CGTACAACTGCGCAGTGCAGATGAAGGTAGTACGGTGTTTTACACGTGTG
TCTGTGGTCACAAGGAATCGACGAACAACTAAATGTCTGCGATTGGAACC
CTCGTCTTCTGCACTGACTGCGGCTCCCTGTTGGATGGCTCAATTGGAGA
TCCCACCAAGATTCTTGTCTGCGATGTCTGCGGAGCTAGGAATAAAGACA
CCGTTCCCCAGACTATTGTCTCCGAGTCCAAGCCGAGCGCATTCCCGTCT
GCCTTGAGAGCGAAAAGATCTGCGGTCCAGACCTTGACGGCGTCCGACAG
AAGAACCGAAGCCCTTACCCAACATACTTGCATCAAATGTGGAAGGAAAG
AGATGTACTACACCACCGTACAACTGCGCAGTGCAGATGAAGGTAGTACG
GTGTTTTACACGTGTGTCTGTGGTCACAAGGAATCGACGAACAACTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006379 | mRNA cleavage |
| GO:0006351 | transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
| GO:0008270 | zinc ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR034004 |
| DBxref | InterPro:IPR019761 |
| DBxref | InterPro:IPR012164 |
| DBxref | InterPro:IPR001222 |
| DBxref | PFAM:PF01096 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An11 | supercontig | An11:2228281..2228795 + |
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