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Sequences
The following sequences are available for this feature:
mRNA from alignment at An11:2249558..2250165+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_007243-T1 ID=CBS51388_007243-T1|Name=CBS51388_007243-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=608bp|location=Sequence derived from alignment at An11:2249558..2250165+ (Aspergillus niger CBS 513.88)
ATGCAAGCCGTCCCGGAATCCCGCCAACAAACCTTCGAGGAGATCTACGG
CCCTCCCGAAAACTTCCTCGAGATAGAAGTACAACCCCCTCCCCCCCCCC
CCCCAATACCCTTCTCCCCCTTCCACCCAACCCCCTTAAACTAACATCCA
CCCCCTAAAAACGGCAGGTTAGGAATCCCCAAACGCACGGCACCTCGCGC
AACATGTACACCTCGTACGAAATCGTCTGCCGGACAAACATCCCCGCCTT
CAAACTCAAACATTCCGTCGTGCGCCGCCGATACTCCGACTTCGAGTACT
TCCGGGATATACTGGAGCGGGAGTCGACGAGGGTCACGATCCCGCCGTTA
CCGGGGAAGGTGTTTACGAATCGGTTCTCTGATGATGTGATTGAGCATAG
ACGGGAGGGTTTGCAGCGGTTTTTGCAGATTGTCGCCGGTCATCCGCTTT
TGCAGACGGGGAGTAAGGTTTTGGCCAGTTTTGTGCAGGGTATGTTTTTC
TCTTTCAGAACTTTTCTTGGTTGTTCTTTTGGGGGTGGGGTGGGGTGAAT
GTGCTAACGCTAATGGGGTTTTTGTGTAGATCCGAATTGGGATCGGAATG
CGTGGTAA back to topCoding sequence (CDS) from alignment at An11:2249558..2250165+ >CBS51388_007243-T1 ID=CBS51388_007243-T1|Name=CBS51388_007243-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1287bp|location=Sequence derived from alignment at An11:2249558..2250165+ (Aspergillus niger CBS 513.88)
ATGCAAGCCGTCCCGGAATCCCGCCAACAAACCTTCGAGGAGATCTACGG
CCCTCCCGAAAACTTCCTCGAGATAGAAGTTAGGAATCCCCAAACGCACG
GCACCTCGCGCAACATGTACACCTCGTACGAAATCGTCTGCCGGACAAAC
ATCCCCGCCTTCAAACTCAAACATTCCGTCGTGCGCCGCCGATACTCCGA
CTTCGAGTACTTCCGGGATATACTGGAGCGGGAGTCGACGAGGGTCACGA
TCCCGCCGTTACCGGGGAAGGTGTTTACGAATCGGTTCTCTGATGATGTG
ATTGAGCATAGACGGGAGGGTTTGCAGCGGTTTTTGCAGATTGTCGCCGG
TCATCCGCTTTTGCAGACGGGGAGTAAGGTTTTGGCCAGTTTTGTGCAGG
ATCCGAATTGGGATCGGAATGCGTGGTAAATGCAAGCCGTCCCGGAATCC
CGCCAACAAACCTTCGAGGAGATCTACGGCCCTCCCGAAAACTTCCTCGA
GATAGAAGTTAGGAATCCCCAAACGCACGGCACCTCGCGCAACATGTACA
CCTCGTACGAAATCGTCTGCCGGACAAACATCCCCGCCTTCAAACTCAAA
CATTCCGTCGTGCGCCGCCGATACTCCGACTTCGAGTACTTCCGGGATAT
ACTGGAGCGGGAGTCGACGAGGGTCACGATCCCGCCGTTACCGGGGAAGG
TGTTTACGAATCGGTTCTCTGATGATGTGATTGAGCATAGACGGGAGGGT
TTGCAGCGGTTTTTGCAGATTGTCGCCGGTCATCCGCTTTTGCAGACGGG
GAGTAAGGTTTTGGCCAGTTTTGTGCAGGATCCGAATTGGGATCGGAATG
CGTGGTAAATGCAAGCCGTCCCGGAATCCCGCCAACAAACCTTCGAGGAG
ATCTACGGCCCTCCCGAAAACTTCCTCGAGATAGAAGTTAGGAATCCCCA
AACGCACGGCACCTCGCGCAACATGTACACCTCGTACGAAATCGTCTGCC
GGACAAACATCCCCGCCTTCAAACTCAAACATTCCGTCGTGCGCCGCCGA
TACTCCGACTTCGAGTACTTCCGGGATATACTGGAGCGGGAGTCGACGAG
GGTCACGATCCCGCCGTTACCGGGGAAGGTGTTTACGAATCGGTTCTCTG
ATGATGTGATTGAGCATAGACGGGAGGGTTTGCAGCGGTTTTTGCAGATT
GTCGCCGGTCATCCGCTTTTGCAGACGGGGAGTAAGGTTTTGGCCAGTTT
TGTGCAGGATCCGAATTGGGATCGGAATGCGTGGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0032266 | phosphatidylinositol-3-phosphate binding |
| GO:0035091 | phosphatidylinositol binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR042138 |
| DBxref | InterPro:IPR036871 |
| DBxref | InterPro:IPR001683 |
| DBxref | PFAM:PF00787 |
| Product | Sorting nexin-3 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An11 | supercontig | An11:2249558..2250165 + |
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