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CBS51388_007244-T1, CBS51388_007244-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_007244-T1
Unique NameCBS51388_007244-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An11:2250610..2252509-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_007244-T1 ID=CBS51388_007244-T1|Name=CBS51388_007244-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1900bp|location=Sequence derived from alignment at An11:2250610..2252509- (Aspergillus niger CBS 513.88)
ATGGATTCCAACGGCTCCTATACCCGCTCCTTCGACGAATCCTTGATTCG CGAACTACCCCAGCTTCAGTCTCTCCGCATTGCTCCCCTCCGTCAGCCGG TGTCTCGCCTCTTGGCCGTGCCCTCCCCGCTCGAACCCAGTGCCAGTCAC GTCCGAGAACCCTCCAGTAACAACAATGCCGGCATCCTCCCTGCCCGCAA TGACTCGGCCCCATCTGGAGCCACCGAAGGGGCAGCTGCTCCCCGACCGA AGAAGTCGGATGCCCCTGCGGACTCCCTCCCGAGCCTGGAGGCGCCTCCC CGGCCAATTCTCCCGGCTTTTGTCAACCTCCGCGCCCTAGAACGATACCC CTACTCCTCGTTTGATGACGACGCCCTTCACTTCCGCAAGCGCAGGCGTT TGGGCGGTCAGGCGGAGACGTTTAGTGAACATCTCCAGCTGCCCATTCCC CAGGCGCAGAAGGAGCAGCGTCCGCCGCCCTTTGGCCCTTTTGCTATTCT CAATGGTCTCAACGAGCCACCTCCAAATGCGGCCTTGCTTCCTCCAATTG AACCCGGCTCGATCACGCAGCTACTAACCAAACCATCCCGAGGCAGTGAG GCTGTGGAGCCGGGCTTACTTACTGCTAATGCTGCAGATAGCCAGATTGC GGAGCGACGAGAAGGTCGCATAGAGGAAATCCTCGATTCTCCGGTCGACA AAACGGTGGACGGCGATTCGAGCGATATCGCCAGTGGACTGCTGGACGAT GTTGCTGCCGCGGAACGGACAAGATCCGAAAAGACAGACCCCGAGACTGA CAATAAAGACGCCTCCACAGAGGACAATACCGAGCCTCTGTCGCCTAAAA CGCGGGGCCGGTCTCGCAAGAACCTTCGTAAGTGGACCGAGGAAGAGACG ACTGCTCTGCTGCGCGGGGTGGTCAAGTGCGGCATCGGCAATTGGACGGC GATTCTGGCCCAGCCAGAGTTGAAGTTCAACAAGCGTAGCGCATCCAATC TGAAAGATAGGTATGGTATAGCCATGGGTGGACGTGGAGGAGACACTGGA TGCCAACTAAGTATAATTTAGGTTTCGTGTGTGTTGCCCCTGGGCATATC GGTAAGTCAGACGCAACTGTCGGCTGTGCACATCTAATCTTCCAAGGGCC GCGGATCCCAATGAAGCCACCAGGCAGCTGCATGACACGCTTGCGAACGC CCTCTCGCGAGCCGAAACCGAAGGGACCGACGGACAAGCGGGGAAGATCC ATCTCCCACACCCGCGGGGGGCTAATGCAGAGGCCAGTGGCGCTGCGGTG AATGAGGCCAGCAGCTCCAAGGACGCTGACTCGAAAGGCAGCAAGGCCAA GAACAGCACCTTGTCAAAGACTACCCCCACGCTCTCTAGTAGATCCAAAT CCACGCTGGCGTCGTTGGGCATCCCCGAGCCACACTTTACGATGAAATCG CGGCGACGCTCACGCCGCCCGTTTACCGTCGTTGAGGACGAGGCACTGCT GAAAGGCTACGCCGTGCATGGCTTCCAGTGGACGCTGATCCAGCAGGACA AGCGACTGAACCTGAGCCATCGCCGGGCGACGGACCTGCGAGACCGATTT CGGACCAAGTTCCCGCACGCCTACCGGGACGGAGGGTCCGTGAGCGGACG GTTGCCCCAGGGGGGGAATCCCGACCCTGGCAAACAGCATGCTGCACGGG TATCTGCTCGCGGGCAGGCGGAGAGCGGCAATGCGCGCGGGCCAATTGAT CCTGCGCTGTCGCCTCCAGCCCCGCCGCAGGGGCTCCACGAGAGCACGAG CAGTGCGGGGGTATTTTCGTTTGCGATGGACGAGAATTCGGGAATGGATG CGACGTGGGCAGATAATACCTTGGCGCCGATGTGGGATGAGCTTACATAG
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Coding sequence (CDS) from alignment at An11:2250610..2252509-

>CBS51388_007244-T1 ID=CBS51388_007244-T1|Name=CBS51388_007244-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=5382bp|location=Sequence derived from alignment at An11:2250610..2252509- (Aspergillus niger CBS 513.88)
GGCCGCGGATCCCAATGAAGCCACCAGGCAGCTGCATGACACGCTTGCGA
ACGCCCTCTCGCGAGCCGAAACCGAAGGGACCGACGGACAAGCGGGGAAG
ATCCATCTCCCACACCCGCGGGGGGCTAATGCAGAGGCCAGTGGCGCTGC
GGTGAATGAGGCCAGCAGCTCCAAGGACGCTGACTCGAAAGGCAGCAAGG
CCAAGAACAGCACCTTGTCAAAGACTACCCCCACGCTCTCTAGTAGATCC
AAATCCACGCTGGCGTCGTTGGGCATCCCCGAGCCACACTTTACGATGAA
ATCGCGGCGACGCTCACGCCGCCCGTTTACCGTCGTTGAGGACGAGGCAC
TGCTGAAAGGCTACGCCGTGCATGGCTTCCAGTGGACGCTGATCCAGCAG
GACAAGCGACTGAACCTGAGCCATCGCCGGGCGACGGACCTGCGAGACCG
ATTTCGGACCAAGTTCCCGCACGCCTACCGGGACGGAGGGTCCGTGAGCG
GACGGTTGCCCCAGGGGGGGAATCCCGACCCTGGCAAACAGCATGCTGCA
CGGGTATCTGCTCGCGGGCAGGCGGAGAGCGGCAATGCGCGCGGGCCAAT
TGATCCTGCGCTGTCGCCTCCAGCCCCGCCGCAGGGGCTCCACGAGAGCA
CGAGCAGTGCGGGGGTATTTTCGTTTGCGATGGACGAGAATTCGGGAATG
GATGCGACGTGGGCAGATAATACCTTGGCGCCGATGTGGGATGAGCTTAC
ATAGGTTTCGTGTGTGTTGCCCCTGGGCATATCGATGGATTCCAACGGCT
CCTATACCCGCTCCTTCGACGAATCCTTGATTCGCGAACTACCCCAGCTT
CAGTCTCTCCGCATTGCTCCCCTCCGTCAGCCGGTGTCTCGCCTCTTGGC
CGTGCCCTCCCCGCTCGAACCCAGTGCCAGTCACGTCCGAGAACCCTCCA
GTAACAACAATGCCGGCATCCTCCCTGCCCGCAATGACTCGGCCCCATCT
GGAGCCACCGAAGGGGCAGCTGCTCCCCGACCGAAGAAGTCGGATGCCCC
TGCGGACTCCCTCCCGAGCCTGGAGGCGCCTCCCCGGCCAATTCTCCCGG
CTTTTGTCAACCTCCGCGCCCTAGAACGATACCCCTACTCCTCGTTTGAT
GACGACGCCCTTCACTTCCGCAAGCGCAGGCGTTTGGGCGGTCAGGCGGA
GACGTTTAGTGAACATCTCCAGCTGCCCATTCCCCAGGCGCAGAAGGAGC
AGCGTCCGCCGCCCTTTGGCCCTTTTGCTATTCTCAATGGTCTCAACGAG
CCACCTCCAAATGCGGCCTTGCTTCCTCCAATTGAACCCGGCTCGATCAC
GCAGCTACTAACCAAACCATCCCGAGGCAGTGAGGCTGTGGAGCCGGGCT
TACTTACTGCTAATGCTGCAGATAGCCAGATTGCGGAGCGACGAGAAGGT
CGCATAGAGGAAATCCTCGATTCTCCGGTCGACAAAACGGTGGACGGCGA
TTCGAGCGATATCGCCAGTGGACTGCTGGACGATGTTGCTGCCGCGGAAC
GGACAAGATCCGAAAAGACAGACCCCGAGACTGACAATAAAGACGCCTCC
ACAGAGGACAATACCGAGCCTCTGTCGCCTAAAACGCGGGGCCGGTCTCG
CAAGAACCTTCGTAAGTGGACCGAGGAAGAGACGACTGCTCTGCTGCGCG
GGGTGGTCAAGTGCGGCATCGGCAATTGGACGGCGATTCTGGCCCAGCCA
GAGTTGAAGTTCAACAAGCGTAGCGCATCCAATCTGAAAGATAGGGCCGC
GGATCCCAATGAAGCCACCAGGCAGCTGCATGACACGCTTGCGAACGCCC
TCTCGCGAGCCGAAACCGAAGGGACCGACGGACAAGCGGGGAAGATCCAT
CTCCCACACCCGCGGGGGGCTAATGCAGAGGCCAGTGGCGCTGCGGTGAA
TGAGGCCAGCAGCTCCAAGGACGCTGACTCGAAAGGCAGCAAGGCCAAGA
ACAGCACCTTGTCAAAGACTACCCCCACGCTCTCTAGTAGATCCAAATCC
ACGCTGGCGTCGTTGGGCATCCCCGAGCCACACTTTACGATGAAATCGCG
GCGACGCTCACGCCGCCCGTTTACCGTCGTTGAGGACGAGGCACTGCTGA
AAGGCTACGCCGTGCATGGCTTCCAGTGGACGCTGATCCAGCAGGACAAG
CGACTGAACCTGAGCCATCGCCGGGCGACGGACCTGCGAGACCGATTTCG
GACCAAGTTCCCGCACGCCTACCGGGACGGAGGGTCCGTGAGCGGACGGT
TGCCCCAGGGGGGGAATCCCGACCCTGGCAAACAGCATGCTGCACGGGTA
TCTGCTCGCGGGCAGGCGGAGAGCGGCAATGCGCGCGGGCCAATTGATCC
TGCGCTGTCGCCTCCAGCCCCGCCGCAGGGGCTCCACGAGAGCACGAGCA
GTGCGGGGGTATTTTCGTTTGCGATGGACGAGAATTCGGGAATGGATGCG
ACGTGGGCAGATAATACCTTGGCGCCGATGTGGGATGAGCTTACATAGGT
TTCGTGTGTGTTGCCCCTGGGCATATCGATGGATTCCAACGGCTCCTATA
CCCGCTCCTTCGACGAATCCTTGATTCGCGAACTACCCCAGCTTCAGTCT
CTCCGCATTGCTCCCCTCCGTCAGCCGGTGTCTCGCCTCTTGGCCGTGCC
CTCCCCGCTCGAACCCAGTGCCAGTCACGTCCGAGAACCCTCCAGTAACA
ACAATGCCGGCATCCTCCCTGCCCGCAATGACTCGGCCCCATCTGGAGCC
ACCGAAGGGGCAGCTGCTCCCCGACCGAAGAAGTCGGATGCCCCTGCGGA
CTCCCTCCCGAGCCTGGAGGCGCCTCCCCGGCCAATTCTCCCGGCTTTTG
TCAACCTCCGCGCCCTAGAACGATACCCCTACTCCTCGTTTGATGACGAC
GCCCTTCACTTCCGCAAGCGCAGGCGTTTGGGCGGTCAGGCGGAGACGTT
TAGTGAACATCTCCAGCTGCCCATTCCCCAGGCGCAGAAGGAGCAGCGTC
CGCCGCCCTTTGGCCCTTTTGCTATTCTCAATGGTCTCAACGAGCCACCT
CCAAATGCGGCCTTGCTTCCTCCAATTGAACCCGGCTCGATCACGCAGCT
ACTAACCAAACCATCCCGAGGCAGTGAGGCTGTGGAGCCGGGCTTACTTA
CTGCTAATGCTGCAGATAGCCAGATTGCGGAGCGACGAGAAGGTCGCATA
GAGGAAATCCTCGATTCTCCGGTCGACAAAACGGTGGACGGCGATTCGAG
CGATATCGCCAGTGGACTGCTGGACGATGTTGCTGCCGCGGAACGGACAA
GATCCGAAAAGACAGACCCCGAGACTGACAATAAAGACGCCTCCACAGAG
GACAATACCGAGCCTCTGTCGCCTAAAACGCGGGGCCGGTCTCGCAAGAA
CCTTCGTAAGTGGACCGAGGAAGAGACGACTGCTCTGCTGCGCGGGGTGG
TCAAGTGCGGCATCGGCAATTGGACGGCGATTCTGGCCCAGCCAGAGTTG
AAGTTCAACAAGCGTAGCGCATCCAATCTGAAAGATAGGGCCGCGGATCC
CAATGAAGCCACCAGGCAGCTGCATGACACGCTTGCGAACGCCCTCTCGC
GAGCCGAAACCGAAGGGACCGACGGACAAGCGGGGAAGATCCATCTCCCA
CACCCGCGGGGGGCTAATGCAGAGGCCAGTGGCGCTGCGGTGAATGAGGC
CAGCAGCTCCAAGGACGCTGACTCGAAAGGCAGCAAGGCCAAGAACAGCA
CCTTGTCAAAGACTACCCCCACGCTCTCTAGTAGATCCAAATCCACGCTG
GCGTCGTTGGGCATCCCCGAGCCACACTTTACGATGAAATCGCGGCGACG
CTCACGCCGCCCGTTTACCGTCGTTGAGGACGAGGCACTGCTGAAAGGCT
ACGCCGTGCATGGCTTCCAGTGGACGCTGATCCAGCAGGACAAGCGACTG
AACCTGAGCCATCGCCGGGCGACGGACCTGCGAGACCGATTTCGGACCAA
GTTCCCGCACGCCTACCGGGACGGAGGGTCCGTGAGCGGACGGTTGCCCC
AGGGGGGGAATCCCGACCCTGGCAAACAGCATGCTGCACGGGTATCTGCT
CGCGGGCAGGCGGAGAGCGGCAATGCGCGCGGGCCAATTGATCCTGCGCT
GTCGCCTCCAGCCCCGCCGCAGGGGCTCCACGAGAGCACGAGCAGTGCGG
GGGTATTTTCGTTTGCGATGGACGAGAATTCGGGAATGGATGCGACGTGG
GCAGATAATACCTTGGCGCCGATGTGGGATGAGCTTACATAGGTTTCGTG
TGTGTTGCCCCTGGGCATATCGATGGATTCCAACGGCTCCTATACCCGCT
CCTTCGACGAATCCTTGATTCGCGAACTACCCCAGCTTCAGTCTCTCCGC
ATTGCTCCCCTCCGTCAGCCGGTGTCTCGCCTCTTGGCCGTGCCCTCCCC
GCTCGAACCCAGTGCCAGTCACGTCCGAGAACCCTCCAGTAACAACAATG
CCGGCATCCTCCCTGCCCGCAATGACTCGGCCCCATCTGGAGCCACCGAA
GGGGCAGCTGCTCCCCGACCGAAGAAGTCGGATGCCCCTGCGGACTCCCT
CCCGAGCCTGGAGGCGCCTCCCCGGCCAATTCTCCCGGCTTTTGTCAACC
TCCGCGCCCTAGAACGATACCCCTACTCCTCGTTTGATGACGACGCCCTT
CACTTCCGCAAGCGCAGGCGTTTGGGCGGTCAGGCGGAGACGTTTAGTGA
ACATCTCCAGCTGCCCATTCCCCAGGCGCAGAAGGAGCAGCGTCCGCCGC
CCTTTGGCCCTTTTGCTATTCTCAATGGTCTCAACGAGCCACCTCCAAAT
GCGGCCTTGCTTCCTCCAATTGAACCCGGCTCGATCACGCAGCTACTAAC
CAAACCATCCCGAGGCAGTGAGGCTGTGGAGCCGGGCTTACTTACTGCTA
ATGCTGCAGATAGCCAGATTGCGGAGCGACGAGAAGGTCGCATAGAGGAA
ATCCTCGATTCTCCGGTCGACAAAACGGTGGACGGCGATTCGAGCGATAT
CGCCAGTGGACTGCTGGACGATGTTGCTGCCGCGGAACGGACAAGATCCG
AAAAGACAGACCCCGAGACTGACAATAAAGACGCCTCCACAGAGGACAAT
ACCGAGCCTCTGTCGCCTAAAACGCGGGGCCGGTCTCGCAAGAACCTTCG
TAAGTGGACCGAGGAAGAGACGACTGCTCTGCTGCGCGGGGTGGTCAAGT
GCGGCATCGGCAATTGGACGGCGATTCTGGCCCAGCCAGAGTTGAAGTTC
AACAAGCGTAGCGCATCCAATCTGAAAGATAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_007244CBS51388_007244Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007244-T1CBS51388_007244-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007244-T1.cdsCBS51388_007244-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007244-T1.exon3CBS51388_007244-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_007244-T1.exon2CBS51388_007244-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_007244-T1.exon1CBS51388_007244-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR009057
DBxrefInterPro:IPR017877
DBxrefInterPro:IPR001005
DBxrefPFAM:PF13921
DBxrefPFAM:PF00249
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An11supercontigAn11:2250610..2252509 -