|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at An11:2254800..2256328- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_007246-T1 ID=CBS51388_007246-T1|Name=CBS51388_007246-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1529bp|location=Sequence derived from alignment at An11:2254800..2256328- (Aspergillus niger CBS 513.88)
ATGTCTGCGTATTCACCTTCGGCCGGCGTGCCGTTCCCGTGCATGTCGGG
GCAGCCTTCCTACCTGGAACTGTTTCCCTCGGGCGAGATTCCCCATACCT
TTTTCACGTATCAGTGGTGGGAGGACGAGGCCACCACTGTGTTCTGGGCC
TTCGATCCCCATGAGATCAAGCGGGTGATCCGATTCGGACTGTTTCGAGA
CAACAACCTCCCGCGGAAGTCTCTTCAGAAACGCGATCCTCAAGCCATTA
CCGCGTTCCTGTACTCGCTCGTGGAGCCGCATGAGATGGCATTTATCGAC
AATCTGTCCCATTATCAGAAGGTCGAGGAGATTATCCGACGATGTCAGAT
CTCCGGTCCTCCTCTCGAGCCTTGGAGCTGGCTTCCTACCAAGCGAGATA
GTGACCTGCCCTCGATAGCAATAGCAGAAGCCATCGACACAGAGAGTCAT
CTTCATTTCACGCGAATATCGTTCGAGGAACTGGTCCGCTACTTCCTGGG
CTACCGAGCACCCTCGGTAGAGTGGTTTTTACAACAGCATACAGCGCTTT
ACATCCACCTGCTCAACTATCTGCAAATGTTCCCAGAGGAGCTGGGGAAG
TACAAGGAGGTTGAACAGGTACGTAATTGGCATGCTAGCATCATGCACCG
CTGCAAACGTGCTGACGCCGGAGCAGCATCTTCAGACTCGCAGCCCTTTT
GCCCACCGTGCCATAAACCGGTGCCTACACGCCATGAGACAGCCAGTACC
AGCCAGTCCGCCGTACCCGGGCTTCCAGTTCATAGCAGCGCCTATCCAGC
AGCTATTCAAAGAGCATTTACCGAGTCTGAAGGCCATTCTGCTTGAGCTC
TCAGTACTAGGGGTACGGTTTACCCGAACATACGTCCACGCCCGAGAGAT
GAACTGGACGAAGCCATTTTCGGTCGAAATCCCCCTGCTAGATGAGTTGG
ATTTGACGAACCCAGCCCCAGCTCTCGATTTTGCCAAGACAACAACCGCT
GTCGACGAAGAGTACTTCTCAGGACTGAGCCATAAAAGCTTCGTGGAACC
CGATGCCATAATCAAACGACTCCTTGTGCTATGGGAGCTACGCAGCCTGG
AAGTGTGGGAATGTTGCACGGGACTACCAGACATGATAGGCTACATTCAG
GAAATTGTCGAGGTACTATCTTTTCTGTGAGAGTGTATAACATGGAACCA
TATACTAACAACAGCAGGCCCTCTACACCTGCCGCAATTACCACTCCTTC
ACGTCGATACTCAGCGGTCTTTACAAGTACAGCACGTCCCACTCGACCTT
CACGCATACCGACAGCGCCACCAACCGGATGACGCTGACTCCGGTGCTGC
CCCCTGCACTAGCGTACCTGCTGGACCCGACAGAGAACTTTGTGGCCTAC
CGACAGGAGTTCCAAACATCGCCGGGCCTCCCTTTCCTCTTCCCGCACAT
TAGGGAGTACCAACAGCACGGCCCGCCAGCCCTGCACCAACTGTTCCAGC
AATTGCAACGTCAGGTACCCACCAACTAG back to topCoding sequence (CDS) from alignment at An11:2254800..2256328- >CBS51388_007246-T1 ID=CBS51388_007246-T1|Name=CBS51388_007246-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4248bp|location=Sequence derived from alignment at An11:2254800..2256328- (Aspergillus niger CBS 513.88)
GCCCTCTACACCTGCCGCAATTACCACTCCTTCACGTCGATACTCAGCGG
TCTTTACAAGTACAGCACGTCCCACTCGACCTTCACGCATACCGACAGCG
CCACCAACCGGATGACGCTGACTCCGGTGCTGCCCCCTGCACTAGCGTAC
CTGCTGGACCCGACAGAGAACTTTGTGGCCTACCGACAGGAGTTCCAAAC
ATCGCCGGGCCTCCCTTTCCTCTTCCCGCACATTAGGGAGTACCAACAGC
ACGGCCCGCCAGCCCTGCACCAACTGTTCCAGCAATTGCAACGTCAGGTA
CCCACCAACTAGCATCTTCAGACTCGCAGCCCTTTTGCCCACCGTGCCAT
AAACCGGTGCCTACACGCCATGAGACAGCCAGTACCAGCCAGTCCGCCGT
ACCCGGGCTTCCAGTTCATAGCAGCGCCTATCCAGCAGCTATTCAAAGAG
CATTTACCGAGTCTGAAGGCCATTCTGCTTGAGCTCTCAGTACTAGGGGT
ACGGTTTACCCGAACATACGTCCACGCCCGAGAGATGAACTGGACGAAGC
CATTTTCGGTCGAAATCCCCCTGCTAGATGAGTTGGATTTGACGAACCCA
GCCCCAGCTCTCGATTTTGCCAAGACAACAACCGCTGTCGACGAAGAGTA
CTTCTCAGGACTGAGCCATAAAAGCTTCGTGGAACCCGATGCCATAATCA
AACGACTCCTTGTGCTATGGGAGCTACGCAGCCTGGAAGTGTGGGAATGT
TGCACGGGACTACCAGACATGATAGGCTACATTCAGGAAATTGTCGAGAT
GTCTGCGTATTCACCTTCGGCCGGCGTGCCGTTCCCGTGCATGTCGGGGC
AGCCTTCCTACCTGGAACTGTTTCCCTCGGGCGAGATTCCCCATACCTTT
TTCACGTATCAGTGGTGGGAGGACGAGGCCACCACTGTGTTCTGGGCCTT
CGATCCCCATGAGATCAAGCGGGTGATCCGATTCGGACTGTTTCGAGACA
ACAACCTCCCGCGGAAGTCTCTTCAGAAACGCGATCCTCAAGCCATTACC
GCGTTCCTGTACTCGCTCGTGGAGCCGCATGAGATGGCATTTATCGACAA
TCTGTCCCATTATCAGAAGGTCGAGGAGATTATCCGACGATGTCAGATCT
CCGGTCCTCCTCTCGAGCCTTGGAGCTGGCTTCCTACCAAGCGAGATAGT
GACCTGCCCTCGATAGCAATAGCAGAAGCCATCGACACAGAGAGTCATCT
TCATTTCACGCGAATATCGTTCGAGGAACTGGTCCGCTACTTCCTGGGCT
ACCGAGCACCCTCGGTAGAGTGGTTTTTACAACAGCATACAGCGCTTTAC
ATCCACCTGCTCAACTATCTGCAAATGTTCCCAGAGGAGCTGGGGAAGTA
CAAGGAGGTTGAACAGGCCCTCTACACCTGCCGCAATTACCACTCCTTCA
CGTCGATACTCAGCGGTCTTTACAAGTACAGCACGTCCCACTCGACCTTC
ACGCATACCGACAGCGCCACCAACCGGATGACGCTGACTCCGGTGCTGCC
CCCTGCACTAGCGTACCTGCTGGACCCGACAGAGAACTTTGTGGCCTACC
GACAGGAGTTCCAAACATCGCCGGGCCTCCCTTTCCTCTTCCCGCACATT
AGGGAGTACCAACAGCACGGCCCGCCAGCCCTGCACCAACTGTTCCAGCA
ATTGCAACGTCAGGTACCCACCAACTAGCATCTTCAGACTCGCAGCCCTT
TTGCCCACCGTGCCATAAACCGGTGCCTACACGCCATGAGACAGCCAGTA
CCAGCCAGTCCGCCGTACCCGGGCTTCCAGTTCATAGCAGCGCCTATCCA
GCAGCTATTCAAAGAGCATTTACCGAGTCTGAAGGCCATTCTGCTTGAGC
TCTCAGTACTAGGGGTACGGTTTACCCGAACATACGTCCACGCCCGAGAG
ATGAACTGGACGAAGCCATTTTCGGTCGAAATCCCCCTGCTAGATGAGTT
GGATTTGACGAACCCAGCCCCAGCTCTCGATTTTGCCAAGACAACAACCG
CTGTCGACGAAGAGTACTTCTCAGGACTGAGCCATAAAAGCTTCGTGGAA
CCCGATGCCATAATCAAACGACTCCTTGTGCTATGGGAGCTACGCAGCCT
GGAAGTGTGGGAATGTTGCACGGGACTACCAGACATGATAGGCTACATTC
AGGAAATTGTCGAGATGTCTGCGTATTCACCTTCGGCCGGCGTGCCGTTC
CCGTGCATGTCGGGGCAGCCTTCCTACCTGGAACTGTTTCCCTCGGGCGA
GATTCCCCATACCTTTTTCACGTATCAGTGGTGGGAGGACGAGGCCACCA
CTGTGTTCTGGGCCTTCGATCCCCATGAGATCAAGCGGGTGATCCGATTC
GGACTGTTTCGAGACAACAACCTCCCGCGGAAGTCTCTTCAGAAACGCGA
TCCTCAAGCCATTACCGCGTTCCTGTACTCGCTCGTGGAGCCGCATGAGA
TGGCATTTATCGACAATCTGTCCCATTATCAGAAGGTCGAGGAGATTATC
CGACGATGTCAGATCTCCGGTCCTCCTCTCGAGCCTTGGAGCTGGCTTCC
TACCAAGCGAGATAGTGACCTGCCCTCGATAGCAATAGCAGAAGCCATCG
ACACAGAGAGTCATCTTCATTTCACGCGAATATCGTTCGAGGAACTGGTC
CGCTACTTCCTGGGCTACCGAGCACCCTCGGTAGAGTGGTTTTTACAACA
GCATACAGCGCTTTACATCCACCTGCTCAACTATCTGCAAATGTTCCCAG
AGGAGCTGGGGAAGTACAAGGAGGTTGAACAGGCCCTCTACACCTGCCGC
AATTACCACTCCTTCACGTCGATACTCAGCGGTCTTTACAAGTACAGCAC
GTCCCACTCGACCTTCACGCATACCGACAGCGCCACCAACCGGATGACGC
TGACTCCGGTGCTGCCCCCTGCACTAGCGTACCTGCTGGACCCGACAGAG
AACTTTGTGGCCTACCGACAGGAGTTCCAAACATCGCCGGGCCTCCCTTT
CCTCTTCCCGCACATTAGGGAGTACCAACAGCACGGCCCGCCAGCCCTGC
ACCAACTGTTCCAGCAATTGCAACGTCAGGTACCCACCAACTAGCATCTT
CAGACTCGCAGCCCTTTTGCCCACCGTGCCATAAACCGGTGCCTACACGC
CATGAGACAGCCAGTACCAGCCAGTCCGCCGTACCCGGGCTTCCAGTTCA
TAGCAGCGCCTATCCAGCAGCTATTCAAAGAGCATTTACCGAGTCTGAAG
GCCATTCTGCTTGAGCTCTCAGTACTAGGGGTACGGTTTACCCGAACATA
CGTCCACGCCCGAGAGATGAACTGGACGAAGCCATTTTCGGTCGAAATCC
CCCTGCTAGATGAGTTGGATTTGACGAACCCAGCCCCAGCTCTCGATTTT
GCCAAGACAACAACCGCTGTCGACGAAGAGTACTTCTCAGGACTGAGCCA
TAAAAGCTTCGTGGAACCCGATGCCATAATCAAACGACTCCTTGTGCTAT
GGGAGCTACGCAGCCTGGAAGTGTGGGAATGTTGCACGGGACTACCAGAC
ATGATAGGCTACATTCAGGAAATTGTCGAGATGTCTGCGTATTCACCTTC
GGCCGGCGTGCCGTTCCCGTGCATGTCGGGGCAGCCTTCCTACCTGGAAC
TGTTTCCCTCGGGCGAGATTCCCCATACCTTTTTCACGTATCAGTGGTGG
GAGGACGAGGCCACCACTGTGTTCTGGGCCTTCGATCCCCATGAGATCAA
GCGGGTGATCCGATTCGGACTGTTTCGAGACAACAACCTCCCGCGGAAGT
CTCTTCAGAAACGCGATCCTCAAGCCATTACCGCGTTCCTGTACTCGCTC
GTGGAGCCGCATGAGATGGCATTTATCGACAATCTGTCCCATTATCAGAA
GGTCGAGGAGATTATCCGACGATGTCAGATCTCCGGTCCTCCTCTCGAGC
CTTGGAGCTGGCTTCCTACCAAGCGAGATAGTGACCTGCCCTCGATAGCA
ATAGCAGAAGCCATCGACACAGAGAGTCATCTTCATTTCACGCGAATATC
GTTCGAGGAACTGGTCCGCTACTTCCTGGGCTACCGAGCACCCTCGGTAG
AGTGGTTTTTACAACAGCATACAGCGCTTTACATCCACCTGCTCAACTAT
CTGCAAATGTTCCCAGAGGAGCTGGGGAAGTACAAGGAGGTTGAACAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005085 | guanyl-nucleotide exchange factor activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007264 | small GTPase mediated signal transduction |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR023578 |
| DBxref | InterPro:IPR036964 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An11 | supercontig | An11:2254800..2256328 - |
|
