|
Sequences
The following sequences are available for this feature:
mRNA from alignment at An11:2262477..2263623- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_007247-T1 ID=CBS51388_007247-T1|Name=CBS51388_007247-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1147bp|location=Sequence derived from alignment at An11:2262477..2263623- (Aspergillus niger CBS 513.88) ATGCCTCGCGGACCGTGAGTAACACGCCCAATGTTGTTCTTACTGCATGC
AGCGAGATTACCGGTGGAATTGCGTTTTCACAGGTCTATCTTCGCTACGG
CAGGAGAATTGAAGATTTTGAGGAGCTGAAAACTAACCACCATGCTCGTA
CAGTAAGAAGCACCAGAAGCGCCTTAGCGCGCCTTCTCACTGGCTCCTGG
ACAAGATGTCCGGAACCTACGCCCCCAAGGCCTCCCCCGGTCCTCACAAG
CTCCGGGACTGCCTGCCCCTGATCGTCTTCATCCGCAACCGGTACGAGCC
ATCCAGCGATTACGAAGGAACCGAAAGAGAGGATCGGAATAGGAGGACTG
ACAGGTTTATAGTCTCAAGTACGCCCTTAACGGCCGTGAGACCAAGGCGA
TCATGATGCAGCGTCTGATCAAGGTCGACGGCAAGGTCCGCACCGACCCT
ACCTACCCCGCTGGTTTCATGGACGTCATCGGCATCGAGAAGACCGGCGA
GAACTTCCGTCTCATCTACGACACCAAGGGTCGCTTCACCGTCCACCGTA
TCCAGGCTGAGGAGGCCGAGTACAAGCTCTGCAAGGTCAAGCGTGTTCAG
CTCGGCAAGGGCGGGATCCCATTCTTGGTTACGCACGATGCGAGAACGTG
AGTGCATACTCTCTACAAGTTCCGCGTCATTCAGTCGTTGGACCAAGCTT
TGGTTGATCGGCGGAGGACGACAGAACTAGAATCGCAGTTCTTTGCTGGA
ACACAGTAAGGAGCCGCAACTTCAGAACAAAGTGTGCTAACAAGGGCTTT
TTTATAGCATCCGTTACCCCGACCCCGCCATCAAGGTCAACGACACCGTG
AAGATCGACATTGCCACTGGCAAGATCGCCGACTTCGTCAAGTTCGACAC
TGGTGTTGTCGCCATGGCCACCGGTGGTCGTAACATGGGTCGTGTCGGTG
TCGTTACCCACCGTGAGCGCCACGATGGTGGTTTCAACATCGTCCACATC
AAGGACGCTATTGACAACACCTTCGCCACCCGTGAGTCCAACGTCTTCGT
CATCGGTCAGGACAAGCCCTGGATCTCCCTGCCCAAGGGCAAGGGTGTCA
AGCTCTCCATCGCTGAGGAGCGTGACCGCCGCCGTGCCCTCCAGTAG back to topCoding sequence (CDS) from alignment at An11:2262477..2263623- >CBS51388_007247-T1 ID=CBS51388_007247-T1|Name=CBS51388_007247-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3108bp|location=Sequence derived from alignment at An11:2262477..2263623- (Aspergillus niger CBS 513.88) CATCCGTTACCCCGACCCCGCCATCAAGGTCAACGACACCGTGAAGATCG ACATTGCCACTGGCAAGATCGCCGACTTCGTCAAGTTCGACACTGGTGTT GTCGCCATGGCCACCGGTGGTCGTAACATGGGTCGTGTCGGTGTCGTTAC CCACCGTGAGCGCCACGATGGTGGTTTCAACATCGTCCACATCAAGGACG CTATTGACAACACCTTCGCCACCCGTGAGTCCAACGTCTTCGTCATCGGT CAGGACAAGCCCTGGATCTCCCTGCCCAAGGGCAAGGGTGTCAAGCTCTC CATCGCTGAGGAGCGTGACCGCCGCCGTGCCCTCCAGTAGTCTCAAGTAC GCCCTTAACGGCCGTGAGACCAAGGCGATCATGATGCAGCGTCTGATCAA GGTCGACGGCAAGGTCCGCACCGACCCTACCTACCCCGCTGGTTTCATGG ACGTCATCGGCATCGAGAAGACCGGCGAGAACTTCCGTCTCATCTACGAC ACCAAGGGTCGCTTCACCGTCCACCGTATCCAGGCTGAGGAGGCCGAGTA CAAGCTCTGCAAGGTCAAGCGTGTTCAGCTCGGCAAGGGCGGGATCCCAT TCTTGGTTACGCACGATGCGAGAACTAAGAAGCACCAGAAGCGCCTTAGC GCGCCTTCTCACTGGCTCCTGGACAAGATGTCCGGAACCTACGCCCCCAA GGCCTCCCCCGGTCCTCACAAGCTCCGGGACTGCCTGCCCCTGATCGTCT TCATCCGCAACCGATGCCTCGCGGACCCATCCGTTACCCCGACCCCGCCA TCAAGGTCAACGACACCGTGAAGATCGACATTGCCACTGGCAAGATCGCC GACTTCGTCAAGTTCGACACTGGTGTTGTCGCCATGGCCACCGGTGGTCG TAACATGGGTCGTGTCGGTGTCGTTACCCACCGTGAGCGCCACGATGGTG GTTTCAACATCGTCCACATCAAGGACGCTATTGACAACACCTTCGCCACC CGTGAGTCCAACGTCTTCGTCATCGGTCAGGACAAGCCCTGGATCTCCCT GCCCAAGGGCAAGGGTGTCAAGCTCTCCATCGCTGAGGAGCGTGACCGCC GCCGTGCCCTCCAGTAGTCTCAAGTACGCCCTTAACGGCCGTGAGACCAA GGCGATCATGATGCAGCGTCTGATCAAGGTCGACGGCAAGGTCCGCACCG ACCCTACCTACCCCGCTGGTTTCATGGACGTCATCGGCATCGAGAAGACC GGCGAGAACTTCCGTCTCATCTACGACACCAAGGGTCGCTTCACCGTCCA CCGTATCCAGGCTGAGGAGGCCGAGTACAAGCTCTGCAAGGTCAAGCGTG TTCAGCTCGGCAAGGGCGGGATCCCATTCTTGGTTACGCACGATGCGAGA ACTAAGAAGCACCAGAAGCGCCTTAGCGCGCCTTCTCACTGGCTCCTGGA CAAGATGTCCGGAACCTACGCCCCCAAGGCCTCCCCCGGTCCTCACAAGC TCCGGGACTGCCTGCCCCTGATCGTCTTCATCCGCAACCGATGCCTCGCG GACCCATCCGTTACCCCGACCCCGCCATCAAGGTCAACGACACCGTGAAG ATCGACATTGCCACTGGCAAGATCGCCGACTTCGTCAAGTTCGACACTGG TGTTGTCGCCATGGCCACCGGTGGTCGTAACATGGGTCGTGTCGGTGTCG TTACCCACCGTGAGCGCCACGATGGTGGTTTCAACATCGTCCACATCAAG GACGCTATTGACAACACCTTCGCCACCCGTGAGTCCAACGTCTTCGTCAT CGGTCAGGACAAGCCCTGGATCTCCCTGCCCAAGGGCAAGGGTGTCAAGC TCTCCATCGCTGAGGAGCGTGACCGCCGCCGTGCCCTCCAGTAGTCTCAA GTACGCCCTTAACGGCCGTGAGACCAAGGCGATCATGATGCAGCGTCTGA TCAAGGTCGACGGCAAGGTCCGCACCGACCCTACCTACCCCGCTGGTTTC ATGGACGTCATCGGCATCGAGAAGACCGGCGAGAACTTCCGTCTCATCTA CGACACCAAGGGTCGCTTCACCGTCCACCGTATCCAGGCTGAGGAGGCCG AGTACAAGCTCTGCAAGGTCAAGCGTGTTCAGCTCGGCAAGGGCGGGATC CCATTCTTGGTTACGCACGATGCGAGAACTAAGAAGCACCAGAAGCGCCT TAGCGCGCCTTCTCACTGGCTCCTGGACAAGATGTCCGGAACCTACGCCC CCAAGGCCTCCCCCGGTCCTCACAAGCTCCGGGACTGCCTGCCCCTGATC GTCTTCATCCGCAACCGATGCCTCGCGGACCCATCCGTTACCCCGACCCC GCCATCAAGGTCAACGACACCGTGAAGATCGACATTGCCACTGGCAAGAT CGCCGACTTCGTCAAGTTCGACACTGGTGTTGTCGCCATGGCCACCGGTG GTCGTAACATGGGTCGTGTCGGTGTCGTTACCCACCGTGAGCGCCACGAT GGTGGTTTCAACATCGTCCACATCAAGGACGCTATTGACAACACCTTCGC CACCCGTGAGTCCAACGTCTTCGTCATCGGTCAGGACAAGCCCTGGATCT CCCTGCCCAAGGGCAAGGGTGTCAAGCTCTCCATCGCTGAGGAGCGTGAC CGCCGCCGTGCCCTCCAGTAGTCTCAAGTACGCCCTTAACGGCCGTGAGA CCAAGGCGATCATGATGCAGCGTCTGATCAAGGTCGACGGCAAGGTCCGC ACCGACCCTACCTACCCCGCTGGTTTCATGGACGTCATCGGCATCGAGAA GACCGGCGAGAACTTCCGTCTCATCTACGACACCAAGGGTCGCTTCACCG TCCACCGTATCCAGGCTGAGGAGGCCGAGTACAAGCTCTGCAAGGTCAAG CGTGTTCAGCTCGGCAAGGGCGGGATCCCATTCTTGGTTACGCACGATGC GAGAACTAAGAAGCACCAGAAGCGCCTTAGCGCGCCTTCTCACTGGCTCC TGGACAAGATGTCCGGAACCTACGCCCCCAAGGCCTCCCCCGGTCCTCAC AAGCTCCGGGACTGCCTGCCCCTGATCGTCTTCATCCGCAACCGATGCCT CGCGGACC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
Term | Definition |
GO:0005840 | ribosome |
Vocabulary: Biological Process
Term | Definition |
GO:0006412 | translation |
Vocabulary: Molecular Function
Term | Definition |
GO:0003735 | structural constituent of ribosome |
GO:0003723 | RNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
Property Name | Value |
DBxref | InterPro:IPR041982 |
DBxref | InterPro:IPR018199 |
DBxref | InterPro:IPR013843 |
DBxref | InterPro:IPR032277 |
DBxref | InterPro:IPR014722 |
DBxref | InterPro:IPR038237 |
DBxref | InterPro:IPR000876 |
DBxref | InterPro:IPR013845 |
DBxref | InterPro:IPR002942 |
DBxref | PFAM:PF01479 |
DBxref | PFAM:PF08071 |
DBxref | PFAM:PF00900 |
DBxref | PFAM:PF16121 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
An11 | supercontig | An11:2262477..2263623 - |
|