You are here

Home

CBS51388_007254-T1, CBS51388_007254-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_007254-T1
Unique NameCBS51388_007254-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An11:2285691..2286103+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_007254-T1 ID=CBS51388_007254-T1|Name=CBS51388_007254-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=413bp|location=Sequence derived from alignment at An11:2285691..2286103+ (Aspergillus niger CBS 513.88)
ATGACTGCCGGGAGAGATATATATGAAGGTTATCGGGAAACGACCAGATG
GGCTAATACGTTCGGATTGAATTCAGGCCGCCGCTCCTTCCACGTCCAGA
AGTCGACTTGCTCCAACTGCGGTTACCCTGCCGCTAAGACTCGCAAGTGT
ACGAATCCTTTTCCCCAAAATCCCACCATCGAAGAACAGCCGCTGGTTCC
TTGAAACCTTGGATACGGATTGTATGAAAGTGTTTGGATGAACATATTGG
CTTACGAAGTTCGTTTTATACAGTCAACTGGAGCGAGAAGGCCAAGCGCA
GAAAGACCACCGGCTCCGGCAGAATGCGTCACCTCAAGGAGGTCCACCGC
CGCTTCCACAACGGCTTCCAGGTCGGCACCCCCAAGGGCGCTCGTGGTCC
CGAGAACCACTAG
back to top

Coding sequence (CDS) from alignment at An11:2285691..2286103+

>CBS51388_007254-T1 ID=CBS51388_007254-T1|Name=CBS51388_007254-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=576bp|location=Sequence derived from alignment at An11:2285691..2286103+ (Aspergillus niger CBS 513.88)
ATGACTGCCGGGAGAGATATATATGAAGGTTATCGGGAAACGACCAGATG
GGCTAATACGTTCGGATTGAATTCAGGCCGCCGCTCCTTCCACGTCCAGA
AGTCGACTTGCTCCAACTGCGGTTACCCTGCCGCTAAGACTCGCAAGTTC
AACTGGAGCGAGAAGGCCAAGCGCAGAAAGACCACCGGCTCCGGCAGAAT
GCGTCACCTCAAGGAGGTCCACCGCCGCTTCCACAACGGCTTCCAGGTCG
GCACCCCCAAGGGCGCTCGTGGTCCCGAGAACCACTAGATGACTGCCGGG
AGAGATATATATGAAGGTTATCGGGAAACGACCAGATGGGCTAATACGTT
CGGATTGAATTCAGGCCGCCGCTCCTTCCACGTCCAGAAGTCGACTTGCT
CCAACTGCGGTTACCCTGCCGCTAAGACTCGCAAGTTCAACTGGAGCGAG
AAGGCCAAGCGCAGAAAGACCACCGGCTCCGGCAGAATGCGTCACCTCAA
GGAGGTCCACCGCCGCTTCCACAACGGCTTCCAGGTCGGCACCCCCAAGG
GCGCTCGTGGTCCCGAGAACCACTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPL37CBS51388_007254Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007254-T1.exon1CBS51388_007254-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_007254-T1.exon2CBS51388_007254-T1.exon2Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007254-T1.cdsCBS51388_007254-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007254-T1CBS51388_007254-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR011332
DBxrefInterPro:IPR011331
DBxrefInterPro:IPR001569
DBxrefPFAM:PF01907
Product60S ribosomal protein L37
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An11supercontigAn11:2285691..2286103 +
Powered by Drupal